RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 GRASPQ7Z6J2 395 aaPredicted RBP17.78■□□□□ 0.44
CXCL1-202ENST00000509101 IFNLR1Q8IU57 520 aaPredicted RBP17.78■□□□□ 0.44
CXCL1-202ENST00000509101 FAM177A1Q8N128 213 aaPredicted RBP17.78■□□□□ 0.44
CXCL1-202ENST00000509101 GSTCDQ8NEC7 633 aa17.78■□□□□ 0.44
CXCL1-202ENST00000509101 HASPINQ8TF76 798 aa17.78■□□□□ 0.44
CXCL1-202ENST00000509101 RPP25Q9BUL9 199 aaKnown RBP17.78■□□□□ 0.44
CXCL1-202ENST00000509101 ZSWIM4Q9H7M6 989 aa17.78■□□□□ 0.44
CXCL1-202ENST00000509101 FBXW11Q9UKB1 542 aa17.78■□□□□ 0.44
CXCL1-202ENST00000509101 NOTCH4Q99466 2003 aa17.77■□□□□ 0.44
CXCL1-202ENST00000509101 SF3B1O75533 1304 aaKnown RBP eCLIP17.77■□□□□ 0.44
CXCL1-202ENST00000509101 TADA2AO75478 443 aa17.77■□□□□ 0.44
CXCL1-202ENST00000509101 GPC5P78333 572 aa17.77■□□□□ 0.44
CXCL1-202ENST00000509101 SPIRE1Q08AE8 756 aa17.77■□□□□ 0.44
CXCL1-202ENST00000509101 LIN9Q5TKA1 542 aa17.77■□□□□ 0.44
CXCL1-202ENST00000509101 CPLX2Q6PUV4 134 aaKnown RBP17.77■□□□□ 0.44
CXCL1-202ENST00000509101 RUFY3Q7L099 469 aa17.77■□□□□ 0.44
CXCL1-202ENST00000509101 GPR65Q8IYL9 337 aa17.77■□□□□ 0.44
CXCL1-202ENST00000509101 PAAF1Q9BRP4 392 aa17.77■□□□□ 0.44
CXCL1-202ENST00000509101 PHF20Q9BVI0 1012 aa17.77■□□□□ 0.44
CXCL1-202ENST00000509101 PARP2Q9UGN5 583 aa17.77■□□□□ 0.44
CXCL1-202ENST00000509101 ZFP37Q9Y6Q3 630 aaPredicted RBP17.77■□□□□ 0.44
CXCL1-202ENST00000509101 TBX3O15119 743 aa17.76■□□□□ 0.43
CXCL1-202ENST00000509101 KINO60870 393 aaKnown RBP17.76■□□□□ 0.43
CXCL1-202ENST00000509101 STARD6P59095 220 aa17.76■□□□□ 0.43
CXCL1-202ENST00000509101 SNW1Q13573 536 aaKnown RBP17.76■□□□□ 0.43
CXCL1-202ENST00000509101 HSP90AA2PQ14568 343 aaPredicted RBP17.76■□□□□ 0.43
CXCL1-202ENST00000509101 SLC27A1Q6PCB7 646 aa17.76■□□□□ 0.43
CXCL1-202ENST00000509101 PIK3AP1Q6ZUJ8 805 aa17.76■□□□□ 0.43
CXCL1-202ENST00000509101 TPH2Q8IWU9 490 aa17.76■□□□□ 0.43
CXCL1-202ENST00000509101 MAML2Q8IZL2 1156 aaPredicted RBP17.76■□□□□ 0.43
CXCL1-202ENST00000509101 SHDQ96IW2 340 aa17.76■□□□□ 0.43
CXCL1-202ENST00000509101 CDH7Q9ULB5 785 aa17.76■□□□□ 0.43
CXCL1-202ENST00000509101 ZMYM2Q9UBW7 1377 aa17.76■□□□□ 0.43
CXCL1-202ENST00000509101 CASTOR2A6NHX0 329 aa17.75■□□□□ 0.43
CXCL1-202ENST00000509101 CCL16O15467 120 aa17.75■□□□□ 0.43
CXCL1-202ENST00000509101 C8AP07357 584 aa17.75■□□□□ 0.43
CXCL1-202ENST00000509101 GLRA2P23416 452 aa17.75■□□□□ 0.43
CXCL1-202ENST00000509101 UBXN2BQ14CS0 331 aa17.75■□□□□ 0.43
CXCL1-202ENST00000509101 MLF2Q15773 248 aaPredicted RBP17.75■□□□□ 0.43
CXCL1-202ENST00000509101 PSMD5Q16401 504 aa17.75■□□□□ 0.43
CXCL1-202ENST00000509101 PPM1LQ5SGD2 360 aa17.75■□□□□ 0.43
CXCL1-202ENST00000509101 CEP57Q86XR8 500 aa17.75■□□□□ 0.43
CXCL1-202ENST00000509101 SUMF1Q8NBK3 374 aa17.75■□□□□ 0.43
CXCL1-202ENST00000509101 OXER1Q8TDS5 423 aa17.75■□□□□ 0.43
CXCL1-202ENST00000509101 ZNF274Q96GC6 653 aaPredicted RBP17.75■□□□□ 0.43
CXCL1-202ENST00000509101 CCDC43Q96MW1 224 aaKnown RBP17.75■□□□□ 0.43
CXCL1-202ENST00000509101 GJB4Q9NTQ9 266 aa17.75■□□□□ 0.43
CXCL1-202ENST00000509101 SPATA6Q9NWH7 488 aaPredicted RBP17.75■□□□□ 0.43
CXCL1-202ENST00000509101 POLIQ9UNA4 740 aa17.75■□□□□ 0.43
CXCL1-202ENST00000509101 TRIP11Q15643 1979 aa17.75■□□□□ 0.43
CXCL1-202ENST00000509101 CACNA1BQ00975 2339 aa17.75■□□□□ 0.43
CXCL1-202ENST00000509101 KANSL1LA0AUZ9 987 aa17.74■□□□□ 0.43
CXCL1-202ENST00000509101 DTNBO60941 627 aa17.74■□□□□ 0.43
CXCL1-202ENST00000509101 KIF4AO95239 1232 aa17.74■□□□□ 0.43
CXCL1-202ENST00000509101 HNRNPA1P09651 372 aaKnown RBP eCLIP17.74■□□□□ 0.43
CXCL1-202ENST00000509101 POU5F1BQ06416 359 aa17.74■□□□□ 0.43
CXCL1-202ENST00000509101 MTSS1LQ765P7 747 aa17.74■□□□□ 0.43
CXCL1-202ENST00000509101 ITFG1Q8TB96 612 aa17.74■□□□□ 0.43
CXCL1-202ENST00000509101 PIK3R5Q8WYR1 880 aa17.74■□□□□ 0.43
CXCL1-202ENST00000509101 FGF13Q92913 245 aa17.74■□□□□ 0.43
CXCL1-202ENST00000509101 NAP1L4Q99733 375 aaKnown RBP17.74■□□□□ 0.43
CXCL1-202ENST00000509101 EIF2AK1Q9BQI3 630 aaKnown RBP17.74■□□□□ 0.43
CXCL1-202ENST00000509101 CLSTN3Q9BQT9 956 aa17.74■□□□□ 0.43
CXCL1-202ENST00000509101 TTPALQ9BTX7 342 aa17.74■□□□□ 0.43
CXCL1-202ENST00000509101 BCO2Q9BYV7 579 aa17.74■□□□□ 0.43
CXCL1-202ENST00000509101 POLR3FQ9H1D9 316 aaPredicted RBP17.74■□□□□ 0.43
CXCL1-202ENST00000509101 ZSWIM6Q9HCJ5 1215 aa17.74■□□□□ 0.43
CXCL1-202ENST00000509101 DLL3Q9NYJ7 618 aa17.74■□□□□ 0.43
CXCL1-202ENST00000509101 CYP46A1Q9Y6A2 500 aa17.74■□□□□ 0.43
CXCL1-202ENST00000509101 SPTBN2O15020 2390 aa17.73■□□□□ 0.43
CXCL1-202ENST00000509101 EPG5Q9HCE0 2579 aa17.73■□□□□ 0.43
CXCL1-202ENST00000509101 FAM205CA6NFA0 338 aa17.73■□□□□ 0.43
CXCL1-202ENST00000509101 LAMTOR5O43504 91 aa17.73■□□□□ 0.43
CXCL1-202ENST00000509101 DGAT1O75907 488 aa17.73■□□□□ 0.43
CXCL1-202ENST00000509101 SLITRK3O94933 977 aa17.73■□□□□ 0.43
CXCL1-202ENST00000509101 REC8O95072 547 aa17.73■□□□□ 0.43
CXCL1-202ENST00000509101 BAG4O95429 457 aaKnown RBP17.73■□□□□ 0.43
CXCL1-202ENST00000509101 ARL2P36404 184 aa17.73■□□□□ 0.43
CXCL1-202ENST00000509101 TUSC3Q13454 348 aa17.73■□□□□ 0.43
CXCL1-202ENST00000509101 RSPO4Q2I0M5 234 aaPredicted RBP17.73■□□□□ 0.43
CXCL1-202ENST00000509101 EARS2Q5JPH6 523 aaKnown RBP17.73■□□□□ 0.43
CXCL1-202ENST00000509101 FAM171A1Q5VUB5 890 aa17.73■□□□□ 0.43
CXCL1-202ENST00000509101 SLFN12Q8IYM2 578 aa17.73■□□□□ 0.43
CXCL1-202ENST00000509101 KXD1Q9BQD3 176 aa17.73■□□□□ 0.43
CXCL1-202ENST00000509101 DDX23Q9BUQ8 820 aaKnown RBP17.73■□□□□ 0.43
CXCL1-202ENST00000509101 NFKBIZQ9BYH8 718 aa17.73■□□□□ 0.43
CXCL1-202ENST00000509101 NCDNQ9UBB6 729 aa17.73■□□□□ 0.43
CXCL1-202ENST00000509101 MTF2Q9Y483 593 aaPredicted RBP17.73■□□□□ 0.43
CXCL1-202ENST00000509101 A0A1B0GUA9 196 aa17.72■□□□□ 0.43
CXCL1-202ENST00000509101 LRRIQ4A6NIV6 560 aa17.72■□□□□ 0.43
CXCL1-202ENST00000509101 ADAM12O43184 909 aa17.72■□□□□ 0.43
CXCL1-202ENST00000509101 USO1O60763 962 aaKnown RBP17.72■□□□□ 0.43
CXCL1-202ENST00000509101 XYLBO75191 536 aa17.72■□□□□ 0.43
CXCL1-202ENST00000509101 XBP1P17861 261 aa17.72■□□□□ 0.43
CXCL1-202ENST00000509101 PRKCQQ04759 706 aa17.72■□□□□ 0.43
CXCL1-202ENST00000509101 SLC44A4Q53GD3 710 aa17.72■□□□□ 0.43
CXCL1-202ENST00000509101 LNX1Q8TBB1 728 aaPredicted RBP17.72■□□□□ 0.43
CXCL1-202ENST00000509101 SLC7A14Q8TBB6 771 aa17.72■□□□□ 0.43
CXCL1-202ENST00000509101 ANKEF1Q9NU02 776 aa17.72■□□□□ 0.43
CXCL1-202ENST00000509101 HCFC1R1Q9NWW0 138 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms