RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 DDAH1O94760 285 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 WNT11O96014 354 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 PRNPP04156 253 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 TXNP10599 105 aaKnown RBP4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 CD8BP10966 210 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 CSF2RAP15509 400 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 TAL1P17542 331 aaPredicted RBP4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 CASTP20810 708 aaKnown RBP4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 CST5P28325 142 aaPredicted RBP4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 TPP2P29144 1249 aaPredicted RBP4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 RFC2P35250 354 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 CCL23P55773 120 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 GJA9P57773 515 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 BEX3Q00994 111 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 AUHQ13825 339 aaKnown RBP4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 BAATQ14032 418 aaPredicted RBP4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 SNX17Q15036 470 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 PWP2Q15269 919 aaKnown RBP4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 USH1GQ495M9 461 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 TMEM67Q5HYA8 995 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 C9orf50Q5SZB4 431 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 TSHZ3Q63HK5 1081 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 KIAA1211LQ6NV74 962 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 KCNV1Q6PIU1 500 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 CASC1Q6TDU7 716 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 C6orf15Q6UXA7 325 aaPredicted RBP4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 CHST3Q7LGC8 479 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 OTOP2Q7RTS6 562 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 SPRED2Q7Z698 418 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 DEFB128Q7Z7B8 93 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 TICAM2Q86XR7 235 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 FBXO16Q8IX29 292 aaPredicted RBP4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 TP53INP2Q8IXH6 220 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 CKAP2LQ8IYA6 745 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 KLHL6Q8WZ60 621 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 CUL5Q93034 780 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 OSBP2Q969R2 916 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 TRIM43Q96BQ3 446 aaPredicted RBP4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 MTG1Q9BT17 334 aaPredicted RBP4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 KATNAL1Q9BW62 490 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 KRTAP9-4Q9BYQ2 154 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 TRIM55Q9BYV6 548 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 DUSP15Q9H1R2 295 aaPredicted RBP4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 IL23AQ9NPF7 189 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 ST7Q9NRC1 585 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 GPATCH2Q9NW75 528 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 GFOD1Q9NXC2 390 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 THEGQ9P2T0 379 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 ADAMTS5Q9UNA0 930 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 MRPL11Q9Y3B7 192 aaKnown RBP4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 Q9Y3F1 56 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 FRMPD2Q68DX3 1309 aaPredicted RBP4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 CDK5RAP2Q96SN8 1893 aa4.35□□□□□ -1.71
HMGN1P11-201ENST00000508668 KRTAP4-8A0A0G2JLE6 195 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 SHOXO15266 292 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 PLA2G6O60733 806 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 EFCAB14O75071 495 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 PARNO95453 639 aaKnown RBP4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 PRAMEF1O95521 474 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 SNAI1O95863 264 aaPredicted RBP4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 PARP1P09874 1014 aaKnown RBP4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 ATP2A2P16615 1042 aaKnown RBP4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 CYP2C18P33260 490 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 SLC16A2P36021 539 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 HAND2P61296 217 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 MRPS5P82675 430 aaKnown RBP4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 CNTN2Q02246 1040 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 STXBP2Q15833 593 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 FXNQ16595 210 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 DUSP28Q4G0W2 176 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 KIAA1755Q5JYT7 1200 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 AKNAD1Q5T1N1 836 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 IFIT1BQ5T764 474 aaKnown RBP4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 VPS53Q5VIR6 699 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 HEATR6Q6AI08 1181 aaKnown RBP4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 CWC27Q6UX04 472 aaKnown RBP4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 SYNE3Q6ZMZ3 975 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 EP400NLQ6ZTU2 488 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 SEPT14Q6ZU15 432 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 ZNF365Q70YC5 407 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 THAP5Q7Z6K1 395 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 CREG2Q8IUH2 290 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 SIRT2Q8IXJ6 389 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 FAM178BQ8IXR5 827 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 CELF2-AS1Q8N7Q2 184 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 DNERQ8NFT8 737 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 MICAL1Q8TDZ2 1067 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 NSUN6Q8TEA1 469 aaKnown RBP4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 ATXN2LQ8WWM7 1075 aaKnown RBP4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 TNPO1Q92973 898 aaKnown RBP4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 BRF1Q92994 677 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 FGD4Q96M96 766 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 DSCC1Q9BVC3 393 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 CARS2Q9HA77 564 aaKnown RBP4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 MLXIPQ9HAP2 919 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 VAT1LQ9HCJ6 419 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 A1CFQ9NQ94 594 aaKnown RBP4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 CYP39A1Q9NYL5 469 aa4.34□□□□□ -1.71
HMGN1P11-201ENST00000508668 SEC63Q9UGP8 760 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms