RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 DLX2Q07687 328 aaPredicted RBP4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 NEXNQ0ZGT2 675 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 RTP5Q14D33 572 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 TNIP1Q15025 636 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 SKOR2Q2VWA4 1001 aaPredicted RBP4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 CCDC152Q4G0S7 254 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 CD276Q5ZPR3 534 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 USP50Q70EL3 339 aaPredicted RBP4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 SAPCD2Q86UD0 394 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 NOSTRINQ8IVI9 506 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 CNTROBQ8N137 903 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 NXPE1Q8N323 547 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 TP53I13Q8NBR0 393 aaPredicted RBP4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 CHST14Q8NCH0 376 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 TBC1D16Q8TBP0 767 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 DDX1Q92499 740 aaKnown RBP4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 MFSD3Q96ES6 412 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 CLIC6Q96NY7 704 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 ZCCHC4Q9H5U6 513 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 INTS7Q9NVH2 962 aaKnown RBP4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 GPRC5DQ9NZD1 345 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 PLAAQ9Y263 795 aa4.39□□□□□ -1.71
UBE2D3-226ENST00000508635 ZNF891A8MT65 544 aaPredicted RBP4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 CBX4O00257 560 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 HIP1RO75146 1068 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 RAD17O75943 681 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 C4BPAP04003 597 aaKnown RBP4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 MMEP08473 750 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 ENO2P09104 434 aaPredicted RBP4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 ZBTB48P10074 688 aaPredicted RBP4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 GJA4P35212 333 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 THBS2P35442 1172 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 MECP2P51608 486 aaKnown RBP4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 KRTAP10-2P60368 255 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 NFKB2Q00653 900 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 SLFN5Q08AF3 891 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 DBPQ10586 325 aaPredicted RBP4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 GCKRQ14397 625 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 SKIDA1Q1XH10 827 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 ZXDCQ2QGD7 858 aaPredicted RBP4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 PRAMEF18Q5VWM3 479 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 UBE3BQ7Z3V4 1068 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 ANKRD18AQ8IVF6 992 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 LINC01356Q8N9X3 169 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 LEO1Q8WVC0 666 aaPredicted RBP4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 DNAAF4Q8WXU2 420 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 DPF2Q92785 391 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 ERCC4Q92889 916 aaPredicted RBP4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 TMEM209Q96SK2 561 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 EYA3Q99504 573 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 SPATA25Q9BR10 227 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 BOCQ9BWV1 1114 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 PLA2G12BQ9BX93 195 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 SLKQ9H2G2 1235 aaPredicted RBP4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 GREM2Q9H772 168 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 DBNDD1Q9H9R9 158 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 PCDH18Q9HCL0 1135 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 ADARB2Q9NS39 739 aaKnown RBP4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 ARHGAP28Q9P2N2 729 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 PGAP2Q9UHJ9 254 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 TAF1P21675 1872 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 CNTNAP1P78357 1384 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 RTL9Q8NET4 1388 aa4.38□□□□□ -1.71
UBE2D3-226ENST00000508635 A0A0G2JLL6 359 aaPredicted RBP4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 SHTN1A0MZ66 631 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 RASSF10A6NK89 507 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 ZNF839A8K0R7 811 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 H7C1D1 291 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 PSMD14O00487 310 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 DDX3XO00571 662 aaKnown RBP eCLIP4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 ECE2O60344 883 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 TRIM13O60858 407 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 UFL1O94874 794 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 FBXO21O94952 628 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 CLSTN1O94985 981 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 CSF1RP07333 972 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 RPS12P25398 132 aaKnown RBP4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 MC4RP32245 332 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 SARSP49591 514 aaKnown RBP4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 KIF11P52732 1056 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 MLLT6P55198 1093 aaPredicted RBP4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 ARHGAP44Q17R89 818 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 BEND3Q5T5X7 828 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 CST9Q5W186 159 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 CARFQ8N187 725 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 STPG3Q8N7X2 389 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 UBR7Q8N806 425 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 DTX3Q8N9I9 347 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 SYT8Q8NBV8 401 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 LINS1Q8NG48 757 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 GPR101Q96P66 508 aaPredicted RBP4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 CDC5LQ99459 802 aaKnown RBP4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 TACO1Q9BSH4 297 aaKnown RBP4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 MYH16Q9H6N6 1097 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 DLL4Q9NR61 685 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 KCNH7Q9NS40 1196 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 UCKL1Q9NWZ5 548 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 RTEL1Q9NZ71 1219 aa4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 H2AFY2Q9P0M6 372 aaPredicted RBP4.37□□□□□ -1.71
UBE2D3-226ENST00000508635 NTMQ9P121 344 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms