RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 QARSP47897 775 aaKnown RBP10.48□□□□□ -0.73
NEDD9-211ENST00000508546 SCNN1GP51170 649 aa10.48□□□□□ -0.73
NEDD9-211ENST00000508546 NPEPPSP55786 919 aa10.48□□□□□ -0.73
NEDD9-211ENST00000508546 PFKPQ01813 784 aa10.48□□□□□ -0.73
NEDD9-211ENST00000508546 LAMTOR4Q0VGL1 99 aa10.48□□□□□ -0.73
NEDD9-211ENST00000508546 SNW1Q13573 536 aaKnown RBP10.48□□□□□ -0.73
NEDD9-211ENST00000508546 SLC44A4Q53GD3 710 aa10.48□□□□□ -0.73
NEDD9-211ENST00000508546 NOTUMQ6P988 496 aa10.48□□□□□ -0.73
NEDD9-211ENST00000508546 TCP11Q8WWU5 503 aa10.48□□□□□ -0.73
NEDD9-211ENST00000508546 EIF2AQ9BY44 585 aaKnown RBP10.48□□□□□ -0.73
NEDD9-211ENST00000508546 RNF39Q9H2S5 420 aa10.48□□□□□ -0.73
NEDD9-211ENST00000508546 LTB4R2Q9NPC1 389 aa10.48□□□□□ -0.73
NEDD9-211ENST00000508546 ZSCAN32Q9NX65 697 aa10.48□□□□□ -0.73
NEDD9-211ENST00000508546 FBXW11Q9UKB1 542 aa10.48□□□□□ -0.73
NEDD9-211ENST00000508546 ADAM28Q9UKQ2 775 aa10.48□□□□□ -0.73
NEDD9-211ENST00000508546 GIT1Q9Y2X7 761 aa10.48□□□□□ -0.73
NEDD9-211ENST00000508546 ZMYM2Q9UBW7 1377 aa10.48□□□□□ -0.73
NEDD9-211ENST00000508546 DSPP15924 2871 aaKnown RBP10.48□□□□□ -0.73
NEDD9-211ENST00000508546 NBEAQ8NFP9 2946 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 FAM170BA6NMN3 283 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 TBC1D4O60343 1298 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 GDF9O60383 454 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 TDP2O95551 362 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 P4HBP07237 508 aaKnown RBP10.47□□□□□ -0.73
NEDD9-211ENST00000508546 IFNAR1P17181 557 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 RPS9P46781 194 aaKnown RBP10.47□□□□□ -0.73
NEDD9-211ENST00000508546 PTENP60484 403 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 FGD1P98174 961 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 CSTF1Q05048 431 aaKnown RBP10.47□□□□□ -0.73
NEDD9-211ENST00000508546 PPP2R5CQ13362 524 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 UBXN2BQ14CS0 331 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 LPAL2Q16609 132 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 GRASPQ7Z6J2 395 aaPredicted RBP10.47□□□□□ -0.73
NEDD9-211ENST00000508546 FERMT3Q86UX7 667 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 IFNLR1Q8IU57 520 aaPredicted RBP10.47□□□□□ -0.73
NEDD9-211ENST00000508546 GLYCTKQ8IVS8 523 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 FBXL16Q8N461 479 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 ZNF579Q8NAF0 562 aaKnown RBP10.47□□□□□ -0.73
NEDD9-211ENST00000508546 RNF149Q8NC42 400 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 GSTCDQ8NEC7 633 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 ST13P5Q8NFI4 369 aaPredicted RBP10.47□□□□□ -0.73
NEDD9-211ENST00000508546 FGF13Q92913 245 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 TMEM143Q96AN5 459 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 CLDN23Q96B33 292 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 CEP170P1Q96L14 293 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 B3GALT6Q96L58 329 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 ZFP42Q96MM3 310 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 NELL2Q99435 816 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 FAM126AQ9BYI3 521 aaPredicted RBP10.47□□□□□ -0.73
NEDD9-211ENST00000508546 CSRNP2Q9H175 543 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 VPS54Q9P1Q0 977 aa10.47□□□□□ -0.73
NEDD9-211ENST00000508546 MTF2Q9Y483 593 aaPredicted RBP10.47□□□□□ -0.73
NEDD9-211ENST00000508546 SPAG17Q6Q759 2223 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 M0R2N6 131 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 EML1O00423 815 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 NCAM2O15394 837 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 TSPAN1O60635 241 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 POU2F2P09086 479 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 RPL17P18621 184 aaKnown RBP10.46□□□□□ -0.73
NEDD9-211ENST00000508546 NLRP5P59047 1200 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 POU5F1BQ06416 359 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 RING1Q06587 406 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 NCBP1Q09161 790 aaKnown RBP10.46□□□□□ -0.73
NEDD9-211ENST00000508546 GRIK3Q13003 919 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 MXD4Q14582 209 aaPredicted RBP10.46□□□□□ -0.73
NEDD9-211ENST00000508546 ZBTB41Q5SVQ8 909 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 TSSK4Q6SA08 328 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 PRR23CQ6ZRP0 262 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 Q6ZUG5 572 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 C4orf19Q8IY42 314 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 HACE1Q8IYU2 909 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 KDF1Q8NAX2 398 aaPredicted RBP10.46□□□□□ -0.73
NEDD9-211ENST00000508546 BRF1Q92994 677 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 FAM20AQ96MK3 541 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 TMEM121BQ9BXQ6 578 aaPredicted RBP10.46□□□□□ -0.73
NEDD9-211ENST00000508546 SLC26A6Q9BXS9 759 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 AGXT2Q9BYV1 514 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 PRMT8Q9NR22 394 aaPredicted RBP10.46□□□□□ -0.73
NEDD9-211ENST00000508546 WRAP73Q9P2S5 460 aaPredicted RBP10.46□□□□□ -0.73
NEDD9-211ENST00000508546 VAV3Q9UKW4 847 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 PCDHA4Q9UN74 947 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 LHX6Q9UPM6 363 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 HES2Q9Y543 173 aa10.46□□□□□ -0.73
NEDD9-211ENST00000508546 SF3B1O75533 1304 aaKnown RBP eCLIP10.46□□□□□ -0.73
NEDD9-211ENST00000508546 ITPR1Q14643 2758 aa10.46□□□□□ -0.74
NEDD9-211ENST00000508546 PDCD11Q14690 1871 aaKnown RBP10.45□□□□□ -0.74
NEDD9-211ENST00000508546 XYLBO75191 536 aa10.45□□□□□ -0.74
NEDD9-211ENST00000508546 TADA2AO75478 443 aa10.45□□□□□ -0.74
NEDD9-211ENST00000508546 C8AP07357 584 aa10.45□□□□□ -0.74
NEDD9-211ENST00000508546 TARSP26639 723 aaKnown RBP10.45□□□□□ -0.74
NEDD9-211ENST00000508546 NTHL1P78549 312 aa10.45□□□□□ -0.74
NEDD9-211ENST00000508546 EMC2Q15006 297 aa10.45□□□□□ -0.74
NEDD9-211ENST00000508546 RTP2Q5QGT7 225 aa10.45□□□□□ -0.74
NEDD9-211ENST00000508546 PPM1LQ5SGD2 360 aa10.45□□□□□ -0.74
NEDD9-211ENST00000508546 LIN9Q5TKA1 542 aa10.45□□□□□ -0.74
NEDD9-211ENST00000508546 PRSS55Q6UWB4 352 aaPredicted RBP10.45□□□□□ -0.74
NEDD9-211ENST00000508546 LRSAM1Q6UWE0 723 aa10.45□□□□□ -0.74
NEDD9-211ENST00000508546 RTL10Q7L3V2 364 aa10.45□□□□□ -0.74
NEDD9-211ENST00000508546 OTUD6AQ7L8S5 288 aa10.45□□□□□ -0.74
NEDD9-211ENST00000508546 FAM177A1Q8N128 213 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms