RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 HAS1Q92839 578 aa7.25□□□□□ -1.25
TOPBP1-206ENST00000508524 ZNF277Q9NRM2 450 aaPredicted RBP7.25□□□□□ -1.25
TOPBP1-206ENST00000508524 FZD1Q9UP38 647 aa7.25□□□□□ -1.25
TOPBP1-206ENST00000508524 ATP8A1Q9Y2Q0 1164 aa7.25□□□□□ -1.25
TOPBP1-206ENST00000508524 WASHC2AQ641Q2 1341 aa7.25□□□□□ -1.25
TOPBP1-206ENST00000508524 ALOX15P16050 662 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-206ENST00000508524 KRT4P19013 534 aa7.24□□□□□ -1.25
TOPBP1-206ENST00000508524 PTPN7P35236 360 aa7.24□□□□□ -1.25
TOPBP1-206ENST00000508524 DPTQ07507 201 aa7.24□□□□□ -1.25
TOPBP1-206ENST00000508524 FAM47AQ5JRC9 791 aa7.24□□□□□ -1.25
TOPBP1-206ENST00000508524 GJC2Q5T442 439 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-206ENST00000508524 LRRC55Q6ZSA7 311 aa7.24□□□□□ -1.25
TOPBP1-206ENST00000508524 NECAB2Q7Z6G3 386 aa7.24□□□□□ -1.25
TOPBP1-206ENST00000508524 FBXO18Q8NFZ0 1043 aa7.24□□□□□ -1.25
TOPBP1-206ENST00000508524 TFAP2CQ92754 450 aa7.24□□□□□ -1.25
TOPBP1-206ENST00000508524 MENTQ9BUN1 341 aa7.24□□□□□ -1.25
TOPBP1-206ENST00000508524 MLST8Q9BVC4 326 aa7.24□□□□□ -1.25
TOPBP1-206ENST00000508524 SLC46A2Q9BY10 475 aa7.24□□□□□ -1.25
TOPBP1-206ENST00000508524 SLC5A4Q9NY91 659 aa7.24□□□□□ -1.25
TOPBP1-206ENST00000508524 GPR45Q9Y5Y3 372 aa7.24□□□□□ -1.25
TOPBP1-206ENST00000508524 TRIM75PA6NK02 468 aa7.23□□□□□ -1.25
TOPBP1-206ENST00000508524 CXorf49A8MYA2 514 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-206ENST00000508524 PJA2O43164 708 aa7.23□□□□□ -1.25
TOPBP1-206ENST00000508524 ZSCAN20P17040 1043 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-206ENST00000508524 AGXTP21549 392 aa7.23□□□□□ -1.25
TOPBP1-206ENST00000508524 GUCY1A2P33402 732 aa7.23□□□□□ -1.25
TOPBP1-206ENST00000508524 TGFB2P61812 414 aa7.23□□□□□ -1.25
TOPBP1-206ENST00000508524 NHLH2Q02577 135 aa7.23□□□□□ -1.25
TOPBP1-206ENST00000508524 SEPT2Q15019 361 aa7.23□□□□□ -1.25
TOPBP1-206ENST00000508524 INAVAQ3KP66 663 aa7.23□□□□□ -1.25
TOPBP1-206ENST00000508524 EFCAB12Q6NXP0 572 aa7.23□□□□□ -1.25
TOPBP1-206ENST00000508524 GDF7Q7Z4P5 450 aa7.23□□□□□ -1.25
TOPBP1-206ENST00000508524 ULK2Q8IYT8 1036 aa7.23□□□□□ -1.25
TOPBP1-206ENST00000508524 CBARPQ8N350 705 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-206ENST00000508524 FAM193BQ96PV7 902 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-206ENST00000508524 DCLRE1CQ96SD1 692 aaKnown RBP7.23□□□□□ -1.25
TOPBP1-206ENST00000508524 PUS7LQ9H0K6 701 aaKnown RBP7.23□□□□□ -1.25
TOPBP1-206ENST00000508524 TRPM5Q9NZQ8 1165 aa7.23□□□□□ -1.25
TOPBP1-206ENST00000508524 PCDHGA2Q9Y5H1 932 aa7.23□□□□□ -1.25
TOPBP1-206ENST00000508524 HS3ST4Q9Y661 456 aa7.23□□□□□ -1.25
TOPBP1-206ENST00000508524 ITGB1P05556 798 aa7.22□□□□□ -1.25
TOPBP1-206ENST00000508524 MGAT1P26572 445 aa7.22□□□□□ -1.25
TOPBP1-206ENST00000508524 MGAT2Q10469 447 aa7.22□□□□□ -1.25
TOPBP1-206ENST00000508524 SP140Q13342 867 aa7.22□□□□□ -1.25
TOPBP1-206ENST00000508524 NOMO1Q15155 1222 aa7.22□□□□□ -1.25
TOPBP1-206ENST00000508524 METRNLQ641Q3 311 aa7.22□□□□□ -1.25
TOPBP1-206ENST00000508524 FAM180AQ6UWF9 173 aa7.22□□□□□ -1.25
TOPBP1-206ENST00000508524 RPUSD2Q8IZ73 545 aaKnown RBP7.22□□□□□ -1.25
TOPBP1-206ENST00000508524 PQLC1Q8N2U9 271 aa7.22□□□□□ -1.25
TOPBP1-206ENST00000508524 CHFRQ96EP1 664 aa7.22□□□□□ -1.25
TOPBP1-206ENST00000508524 SLC2A13Q96QE2 648 aa7.22□□□□□ -1.25
TOPBP1-206ENST00000508524 ADI1Q9BV57 179 aa7.22□□□□□ -1.25
TOPBP1-206ENST00000508524 TEX101Q9BY14 249 aa7.22□□□□□ -1.25
TOPBP1-206ENST00000508524 ZBTB21Q9ULJ3 1066 aa7.22□□□□□ -1.25
TOPBP1-206ENST00000508524 SIK3Q9Y2K2 1263 aa7.22□□□□□ -1.25
TOPBP1-206ENST00000508524 RBP3P10745 1247 aa7.21□□□□□ -1.26
TOPBP1-206ENST00000508524 SLC6A9P48067 706 aa7.21□□□□□ -1.26
TOPBP1-206ENST00000508524 CLRN1P58418 232 aa7.21□□□□□ -1.26
TOPBP1-206ENST00000508524 RNASE9P60153 205 aaKnown RBP7.21□□□□□ -1.26
TOPBP1-206ENST00000508524 FAM102AQ5T9C2 384 aaPredicted RBP7.21□□□□□ -1.26
TOPBP1-206ENST00000508524 RNF187Q5TA31 235 aaPredicted RBP7.21□□□□□ -1.26
TOPBP1-206ENST00000508524 PCSK4Q6UW60 755 aa7.21□□□□□ -1.26
TOPBP1-206ENST00000508524 SYNE4Q8N205 404 aa7.21□□□□□ -1.26
TOPBP1-206ENST00000508524 OR2I1PQ8NGU4 316 aa7.21□□□□□ -1.26
TOPBP1-206ENST00000508524 ZFP28Q8NHY6 868 aa7.21□□□□□ -1.26
TOPBP1-206ENST00000508524 UHRF1Q96T88 793 aaPredicted RBP7.21□□□□□ -1.26
TOPBP1-206ENST00000508524 NEU1Q99519 415 aa7.21□□□□□ -1.26
TOPBP1-206ENST00000508524 IKZF4Q9H2S9 585 aa7.21□□□□□ -1.26
TOPBP1-206ENST00000508524 POGKQ9P215 609 aa7.21□□□□□ -1.26
TOPBP1-206ENST00000508524 PNPLA7Q6ZV29 1317 aa7.21□□□□□ -1.26
TOPBP1-206ENST00000508524 ZNF185O15231 689 aa7.2□□□□□ -1.26
TOPBP1-206ENST00000508524 SNRPA1P09661 255 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-206ENST00000508524 GSPT1P15170 499 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-206ENST00000508524 IARSP41252 1262 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-206ENST00000508524 INHBCP55103 352 aa7.2□□□□□ -1.26
TOPBP1-206ENST00000508524 AFMIDQ63HM1 303 aa7.2□□□□□ -1.26
TOPBP1-206ENST00000508524 PROKR1Q8TCW9 393 aa7.2□□□□□ -1.26
TOPBP1-206ENST00000508524 MYEOVQ96EZ4 313 aa7.2□□□□□ -1.26
TOPBP1-206ENST00000508524 LDAHQ9H6V9 325 aa7.2□□□□□ -1.26
TOPBP1-206ENST00000508524 LANCL2Q9NS86 450 aa7.2□□□□□ -1.26
TOPBP1-206ENST00000508524 WDR33Q9C0J8 1336 aaKnown RBP7.2□□□□□ -1.26
TOPBP1-206ENST00000508524 DIRC3C9JPN6 131 aa7.19□□□□□ -1.26
TOPBP1-206ENST00000508524 NCR1O76036 304 aa7.19□□□□□ -1.26
TOPBP1-206ENST00000508524 ENDOD1O94919 500 aa7.19□□□□□ -1.26
TOPBP1-206ENST00000508524 ABHD16AO95870 558 aa7.19□□□□□ -1.26
TOPBP1-206ENST00000508524 LAG3P18627 525 aa7.19□□□□□ -1.26
TOPBP1-206ENST00000508524 FPR1P21462 350 aa7.19□□□□□ -1.26
TOPBP1-206ENST00000508524 CDKN1CP49918 316 aaPredicted RBP7.19□□□□□ -1.26
TOPBP1-206ENST00000508524 PER3P56645 1201 aa7.19□□□□□ -1.26
TOPBP1-206ENST00000508524 AMPD3Q01432 767 aa7.19□□□□□ -1.26
TOPBP1-206ENST00000508524 PDCD4Q53EL6 469 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-206ENST00000508524 ATXN7L2Q5T6C5 722 aaPredicted RBP7.19□□□□□ -1.26
TOPBP1-206ENST00000508524 AMOTL1Q8IY63 956 aa7.19□□□□□ -1.26
TOPBP1-206ENST00000508524 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.19□□□□□ -1.26
TOPBP1-206ENST00000508524 STON2Q8WXE9 905 aa7.19□□□□□ -1.26
TOPBP1-206ENST00000508524 PRRX2Q99811 253 aa7.19□□□□□ -1.26
TOPBP1-206ENST00000508524 SLITRK6Q9H5Y7 841 aa7.19□□□□□ -1.26
TOPBP1-206ENST00000508524 AKIP1Q9NQ31 210 aa7.19□□□□□ -1.26
TOPBP1-206ENST00000508524 CENPVL1A0A0U1RR11 272 aa7.18□□□□□ -1.26
TOPBP1-206ENST00000508524 GAGE12BA1L429 117 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms