RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 LRRC27Q9C0I9 530 aa21.8■■□□□ 1.08
SFXN1-209ENST00000508290 CDT1Q9H211 546 aa21.8■■□□□ 1.08
SFXN1-209ENST00000508290 CUEDC2Q9H467 287 aa21.8■■□□□ 1.08
SFXN1-209ENST00000508290 SEL1LQ9UBV2 794 aa21.8■■□□□ 1.08
SFXN1-209ENST00000508290 TNFRSF10AO00220 468 aa21.79■■□□□ 1.08
SFXN1-209ENST00000508290 TRAK2O60296 914 aa21.79■■□□□ 1.08
SFXN1-209ENST00000508290 B4GALT3O60512 393 aa21.79■■□□□ 1.08
SFXN1-209ENST00000508290 CUTAO60888 179 aa21.79■■□□□ 1.08
SFXN1-209ENST00000508290 CXCL14O95715 111 aa21.79■■□□□ 1.08
SFXN1-209ENST00000508290 SOD2P04179 222 aa21.79■■□□□ 1.08
SFXN1-209ENST00000508290 HOXB8P17481 243 aaPredicted RBP21.79■■□□□ 1.08
SFXN1-209ENST00000508290 GTF2F1P35269 517 aaKnown RBP eCLIP21.79■■□□□ 1.08
SFXN1-209ENST00000508290 STAT6P42226 847 aa21.79■■□□□ 1.08
SFXN1-209ENST00000508290 BECN1Q14457 450 aa21.79■■□□□ 1.08
SFXN1-209ENST00000508290 SPECC1Q5M775 1068 aa21.79■■□□□ 1.08
SFXN1-209ENST00000508290 USP49Q70CQ1 688 aa21.79■■□□□ 1.08
SFXN1-209ENST00000508290 CASP10Q92851 521 aa21.79■■□□□ 1.08
SFXN1-209ENST00000508290 MSLNLQ96KJ4 702 aa21.79■■□□□ 1.08
SFXN1-209ENST00000508290 EMILIN2Q9BXX0 1053 aa21.79■■□□□ 1.08
SFXN1-209ENST00000508290 ST6GALNAC4Q9H4F1 302 aa21.79■■□□□ 1.08
SFXN1-209ENST00000508290 MIOSQ9NXC5 875 aa21.79■■□□□ 1.08
SFXN1-209ENST00000508290 KLK14Q9P0G3 267 aa21.79■■□□□ 1.08
SFXN1-209ENST00000508290 PCDHGC5Q9Y5F6 944 aa21.79■■□□□ 1.08
SFXN1-209ENST00000508290 TTC28Q96AY4 2481 aa21.79■■□□□ 1.08
SFXN1-209ENST00000508290 ATG2AQ2TAZ0 1938 aa21.78■■□□□ 1.08
SFXN1-209ENST00000508290 NPHP3-ACAD11A0A0J9YXS1 232 aa21.78■■□□□ 1.08
SFXN1-209ENST00000508290 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.78■■□□□ 1.08
SFXN1-209ENST00000508290 HIDE1A8MVS5 230 aa21.78■■□□□ 1.08
SFXN1-209ENST00000508290 CLDN3O15551 220 aa21.78■■□□□ 1.08
SFXN1-209ENST00000508290 URODP06132 367 aa21.78■■□□□ 1.08
SFXN1-209ENST00000508290 GAP43P17677 238 aa21.78■■□□□ 1.08
SFXN1-209ENST00000508290 KCNC3Q14003 757 aa21.78■■□□□ 1.08
SFXN1-209ENST00000508290 FAM178BQ8IXR5 827 aa21.78■■□□□ 1.08
SFXN1-209ENST00000508290 LRRC15Q8TF66 581 aa21.78■■□□□ 1.08
SFXN1-209ENST00000508290 BCL7CQ8WUZ0 217 aaPredicted RBP21.78■■□□□ 1.08
SFXN1-209ENST00000508290 UROC1Q96N76 676 aa21.78■■□□□ 1.08
SFXN1-209ENST00000508290 POP1Q99575 1024 aaKnown RBP21.78■■□□□ 1.08
SFXN1-209ENST00000508290 HERC2P3Q9BVR0 1158 aa21.78■■□□□ 1.08
SFXN1-209ENST00000508290 MRPL17Q9NRX2 175 aaKnown RBP21.78■■□□□ 1.08
SFXN1-209ENST00000508290 SLC38A7Q9NVC3 462 aa21.78■■□□□ 1.08
SFXN1-209ENST00000508290 MARCH5Q9NX47 278 aa21.78■■□□□ 1.08
SFXN1-209ENST00000508290 PRG3Q9Y2Y8 225 aaPredicted RBP21.78■■□□□ 1.08
SFXN1-209ENST00000508290 SPTBN5Q9NRC6 3674 aaKnown RBP21.77■■□□□ 1.08
SFXN1-209ENST00000508290 BRWD1Q9NSI6 2320 aa21.77■■□□□ 1.08
SFXN1-209ENST00000508290 K7ENM7 598 aa21.77■■□□□ 1.08
SFXN1-209ENST00000508290 PTGESO14684 152 aa21.77■■□□□ 1.08
SFXN1-209ENST00000508290 PER2O15055 1255 aa21.77■■□□□ 1.08
SFXN1-209ENST00000508290 LINC01565O15544 149 aa21.77■■□□□ 1.08
SFXN1-209ENST00000508290 C1RP00736 705 aa21.77■■□□□ 1.08
SFXN1-209ENST00000508290 PIGRP01833 764 aa21.77■■□□□ 1.08
SFXN1-209ENST00000508290 CACNB1Q02641 598 aaPredicted RBP21.77■■□□□ 1.08
SFXN1-209ENST00000508290 CREMQ03060 361 aa21.77■■□□□ 1.08
SFXN1-209ENST00000508290 MCL1Q07820 350 aa21.77■■□□□ 1.08
SFXN1-209ENST00000508290 ELAVL2Q12926 359 aaKnown RBP21.77■■□□□ 1.08
SFXN1-209ENST00000508290 HSP90AA2PQ14568 343 aaPredicted RBP21.77■■□□□ 1.08
SFXN1-209ENST00000508290 NOLC1Q14978 699 aaKnown RBP eCLIP21.77■■□□□ 1.08
SFXN1-209ENST00000508290 SMAD2Q15796 467 aaKnown RBP21.77■■□□□ 1.08
SFXN1-209ENST00000508290 RNF168Q8IYW5 571 aaPredicted RBP21.77■■□□□ 1.08
SFXN1-209ENST00000508290 SMRP1Q8NCR6 262 aa21.77■■□□□ 1.08
SFXN1-209ENST00000508290 HVCN1Q96D96 273 aa21.77■■□□□ 1.08
SFXN1-209ENST00000508290 ACAP3Q96P50 834 aa21.77■■□□□ 1.08
SFXN1-209ENST00000508290 PYM1Q9BRP8 204 aaKnown RBP21.77■■□□□ 1.08
SFXN1-209ENST00000508290 DZANK1Q9NVP4 752 aa21.77■■□□□ 1.08
SFXN1-209ENST00000508290 CLEC1BQ9P126 229 aa21.77■■□□□ 1.08
SFXN1-209ENST00000508290 TFIP11Q9UBB9 837 aaKnown RBP21.77■■□□□ 1.08
SFXN1-209ENST00000508290 TBX20Q9UMR3 447 aa21.77■■□□□ 1.08
SFXN1-209ENST00000508290 USP20Q9Y2K6 914 aa21.77■■□□□ 1.08
SFXN1-209ENST00000508290 GDAQ9Y2T3 454 aa21.77■■□□□ 1.08
SFXN1-209ENST00000508290 ATP6V1DQ9Y5K8 247 aa21.77■■□□□ 1.08
SFXN1-209ENST00000508290 SF3B1O75533 1304 aaKnown RBP eCLIP21.77■■□□□ 1.079e-6■■■■■ 68.9
SFXN1-209ENST00000508290 ABLIM1O14639 778 aa21.76■■□□□ 1.07
SFXN1-209ENST00000508290 GLP2RO95838 553 aa21.76■■□□□ 1.07
SFXN1-209ENST00000508290 EFEMP2O95967 443 aa21.76■■□□□ 1.07
SFXN1-209ENST00000508290 VCANP13611 3396 aa21.76■■□□□ 1.07
SFXN1-209ENST00000508290 CA8P35219 290 aa21.76■■□□□ 1.07
SFXN1-209ENST00000508290 DLX2Q07687 328 aaPredicted RBP21.76■■□□□ 1.07
SFXN1-209ENST00000508290 PTPN14Q15678 1187 aa21.76■■□□□ 1.07
SFXN1-209ENST00000508290 TPRNQ4KMQ1 711 aa21.76■■□□□ 1.07
SFXN1-209ENST00000508290 XKR4Q5GH76 650 aa21.76■■□□□ 1.07
SFXN1-209ENST00000508290 ELMSAN1Q6PJG2 1045 aa21.76■■□□□ 1.07
SFXN1-209ENST00000508290 DDX12PQ92771 950 aa21.76■■□□□ 1.07
SFXN1-209ENST00000508290 BICD1Q96G01 975 aa21.76■■□□□ 1.07
SFXN1-209ENST00000508290 TNMDQ9H2S6 317 aa21.76■■□□□ 1.07
SFXN1-209ENST00000508290 ZHX3Q9H4I2 956 aa21.76■■□□□ 1.07
SFXN1-209ENST00000508290 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.76■■□□□ 1.07
SFXN1-209ENST00000508290 DPP7Q9UHL4 492 aa21.76■■□□□ 1.07
SFXN1-209ENST00000508290 ADAM28Q9UKQ2 775 aa21.76■■□□□ 1.07
SFXN1-209ENST00000508290 HNRNPDLO14979 420 aaKnown RBP21.75■■□□□ 1.07
SFXN1-209ENST00000508290 MBTPS2O43462 519 aa21.75■■□□□ 1.07
SFXN1-209ENST00000508290 TADA2AO75478 443 aa21.75■■□□□ 1.07
SFXN1-209ENST00000508290 GLUD2P49448 558 aa21.75■■□□□ 1.07
SFXN1-209ENST00000508290 LIG4P49917 911 aa21.75■■□□□ 1.07
SFXN1-209ENST00000508290 GTF2BQ00403 316 aa21.75■■□□□ 1.07
SFXN1-209ENST00000508290 ALCAMQ13740 583 aa21.75■■□□□ 1.07
SFXN1-209ENST00000508290 KIAA1841Q6NSI8 718 aa21.75■■□□□ 1.07
SFXN1-209ENST00000508290 VN1R3Q9BXE9 311 aa21.75■■□□□ 1.07
SFXN1-209ENST00000508290 MAGEF1Q9HAY2 307 aa21.75■■□□□ 1.07
SFXN1-209ENST00000508290 ANKFY1Q9P2R3 1169 aa21.75■■□□□ 1.07
SFXN1-209ENST00000508290 HCFC2Q9Y5Z7 792 aa21.75■■□□□ 1.07
SFXN1-209ENST00000508290 MYO7AQ13402 2215 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms