RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 ATP8B4Q8TF62 1192 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 HDAC7Q8WUI4 952 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 OSGEPQ9NPF4 335 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 SLC45A1Q9Y2W3 748 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 MCM3APO60318 1980 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 LRRIQ4A6NIV6 560 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 KCNK3O14649 394 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 SLC26A2P50443 739 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 EFNA5P52803 228 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 DDX1Q92499 740 aaKnown RBP19.04■□□□□ 0.64
SFXN1-208ENST00000507823 GOLPH3Q9H4A6 298 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 AZI2Q9H6S1 392 aa19.04■□□□□ 0.64
SFXN1-208ENST00000507823 DIS3Q9Y2L1 958 aaKnown RBP19.04■□□□□ 0.64
SFXN1-208ENST00000507823 EDN1P05305 212 aa19.03■□□□□ 0.64
SFXN1-208ENST00000507823 MYBL2P10244 700 aa19.03■□□□□ 0.64
SFXN1-208ENST00000507823 FMO1Q01740 532 aa19.03■□□□□ 0.64
SFXN1-208ENST00000507823 DAAM2Q86T65 1068 aa19.03■□□□□ 0.64
SFXN1-208ENST00000507823 SELENOOQ9BVL4 669 aa19.03■□□□□ 0.64
SFXN1-208ENST00000507823 ST7Q9NRC1 585 aa19.03■□□□□ 0.64
SFXN1-208ENST00000507823 CYP26A1O43174 497 aa19.03■□□□□ 0.64
SFXN1-208ENST00000507823 FTLP02792 175 aaPredicted RBP19.03■□□□□ 0.64
SFXN1-208ENST00000507823 DLATP10515 647 aaKnown RBP19.03■□□□□ 0.64
SFXN1-208ENST00000507823 CYP11B1P15538 503 aa19.03■□□□□ 0.64
SFXN1-208ENST00000507823 CDR2Q01850 454 aa19.03■□□□□ 0.64
SFXN1-208ENST00000507823 HSDL1Q3SXM5 330 aa19.03■□□□□ 0.64
SFXN1-208ENST00000507823 C11orf63Q6NUN7 778 aa19.03■□□□□ 0.64
SFXN1-208ENST00000507823 TCP11Q8WWU5 503 aa19.03■□□□□ 0.64
SFXN1-208ENST00000507823 GDF3Q9NR23 364 aa19.03■□□□□ 0.64
SFXN1-208ENST00000507823 AMFRQ9UKV5 643 aa19.03■□□□□ 0.64
SFXN1-208ENST00000507823 PNMA3Q9UL41 463 aa19.03■□□□□ 0.64
SFXN1-208ENST00000507823 COG5Q9UP83 839 aa19.03■□□□□ 0.64
SFXN1-208ENST00000507823 TMCO5BA8MYB1 307 aa19.02■□□□□ 0.64
SFXN1-208ENST00000507823 DDX3YO15523 660 aaKnown RBP19.02■□□□□ 0.64
SFXN1-208ENST00000507823 WNT7BP56706 349 aa19.02■□□□□ 0.64
SFXN1-208ENST00000507823 MKRN4PQ13434 485 aaPredicted RBP19.02■□□□□ 0.64
SFXN1-208ENST00000507823 SMYD5Q6GMV2 418 aa19.02■□□□□ 0.64
SFXN1-208ENST00000507823 C8orf74Q6P047 294 aa19.02■□□□□ 0.64
SFXN1-208ENST00000507823 SLC47A2Q86VL8 602 aa19.02■□□□□ 0.64
SFXN1-208ENST00000507823 DHX38Q92620 1227 aaKnown RBP19.02■□□□□ 0.64
SFXN1-208ENST00000507823 TATDN2Q93075 761 aa19.02■□□□□ 0.64
SFXN1-208ENST00000507823 TARS2Q9BW92 718 aaKnown RBP19.02■□□□□ 0.64
SFXN1-208ENST00000507823 CNTNAP2Q9UHC6 1331 aa19.02■□□□□ 0.64
SFXN1-208ENST00000507823 IQCA1LA6NCM1 817 aa19.02■□□□□ 0.63
SFXN1-208ENST00000507823 BHMG1C9JSJ3 638 aaPredicted RBP19.02■□□□□ 0.63
SFXN1-208ENST00000507823 GRIN3BO60391 1043 aa19.02■□□□□ 0.63
SFXN1-208ENST00000507823 AARSP49588 968 aaKnown RBP eCLIP19.02■□□□□ 0.63
SFXN1-208ENST00000507823 GPC5P78333 572 aa19.02■□□□□ 0.63
SFXN1-208ENST00000507823 GRM1Q13255 1194 aa19.02■□□□□ 0.63
SFXN1-208ENST00000507823 EEPD1Q7L9B9 569 aa19.02■□□□□ 0.63
SFXN1-208ENST00000507823 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.02■□□□□ 0.637e-7■□□□□ 9.6
SFXN1-208ENST00000507823 ASB14A6NK59 587 aa19.01■□□□□ 0.63
SFXN1-208ENST00000507823 FAM189A1O60320 539 aa19.01■□□□□ 0.63
SFXN1-208ENST00000507823 MSCO60682 206 aa19.01■□□□□ 0.63
SFXN1-208ENST00000507823 ABCB4P21439 1286 aa19.01■□□□□ 0.63
SFXN1-208ENST00000507823 DRP2Q13474 957 aa19.01■□□□□ 0.63
SFXN1-208ENST00000507823 MXD4Q14582 209 aaPredicted RBP19.01■□□□□ 0.63
SFXN1-208ENST00000507823 PLCB4Q15147 1175 aa19.01■□□□□ 0.63
SFXN1-208ENST00000507823 PRPF31Q8WWY3 499 aaKnown RBP19.01■□□□□ 0.63
SFXN1-208ENST00000507823 ZBTB45Q96K62 511 aaPredicted RBP19.01■□□□□ 0.63
SFXN1-208ENST00000507823 CGRRF1Q99675 332 aa19.01■□□□□ 0.63
SFXN1-208ENST00000507823 CLSTN1O94985 981 aa19.01■□□□□ 0.63
SFXN1-208ENST00000507823 TERF2Q15554 542 aa19.01■□□□□ 0.63
SFXN1-208ENST00000507823 TDRD10Q5VZ19 366 aaKnown RBP19.01■□□□□ 0.63
SFXN1-208ENST00000507823 PNMA8AQ86V59 439 aaPredicted RBP19.01■□□□□ 0.63
SFXN1-208ENST00000507823 FNBP1Q96RU3 617 aa19.01■□□□□ 0.63
SFXN1-208ENST00000507823 PLXNA1Q9UIW2 1896 aa19■□□□□ 0.63
SFXN1-208ENST00000507823 PGRMC1O00264 195 aaKnown RBP19■□□□□ 0.63
SFXN1-208ENST00000507823 ZMYND10O75800 440 aa19■□□□□ 0.63
SFXN1-208ENST00000507823 CYP1A2P05177 515 aa19■□□□□ 0.63
SFXN1-208ENST00000507823 OAS2P29728 719 aaKnown RBP19■□□□□ 0.63
SFXN1-208ENST00000507823 TNNC1P63316 161 aa19■□□□□ 0.63
SFXN1-208ENST00000507823 JPH2Q9BR39 696 aaPredicted RBP19■□□□□ 0.63
SFXN1-208ENST00000507823 MSTO1Q9BUK6 570 aa19■□□□□ 0.63
SFXN1-208ENST00000507823 SEPT11Q9NVA2 429 aaKnown RBP19■□□□□ 0.63
SFXN1-208ENST00000507823 RBAKQ9NYW8 714 aaPredicted RBP19■□□□□ 0.63
SFXN1-208ENST00000507823 PTPRJQ12913 1337 aa19■□□□□ 0.63
SFXN1-208ENST00000507823 H3BQF6 201 aa19■□□□□ 0.63
SFXN1-208ENST00000507823 VNN1O95497 513 aa19■□□□□ 0.63
SFXN1-208ENST00000507823 HLA-DRAP01903 254 aa19■□□□□ 0.63
SFXN1-208ENST00000507823 MATR3P43243 847 aaKnown RBP eCLIP19■□□□□ 0.63
SFXN1-208ENST00000507823 PDE6CP51160 858 aa19■□□□□ 0.63
SFXN1-208ENST00000507823 ZNF677Q86XU0 584 aa19■□□□□ 0.63
SFXN1-208ENST00000507823 FBXO16Q8IX29 292 aaPredicted RBP19■□□□□ 0.63
SFXN1-208ENST00000507823 DHX37Q8IY37 1157 aaKnown RBP19■□□□□ 0.63
SFXN1-208ENST00000507823 EIF1ADQ8N9N8 165 aaKnown RBP19■□□□□ 0.63
SFXN1-208ENST00000507823 CARD9Q9H257 536 aa19■□□□□ 0.63
SFXN1-208ENST00000507823 PDE11AQ9HCR9 933 aa19■□□□□ 0.63
SFXN1-208ENST00000507823 C1orf112Q9NSG2 853 aa19■□□□□ 0.63
SFXN1-208ENST00000507823 ABLIM1O14639 778 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 MMEP08473 750 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 ACOT2P49753 483 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 GPS2Q13227 327 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 ZNF792Q3KQV3 632 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 BRSK2Q8IWQ3 736 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 CAVIN3Q969G5 261 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 SLC10A4Q96EP9 437 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 ACBD3Q9H3P7 528 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 SMARCAD1Q9H4L7 1026 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 HPCAL4Q9UM19 191 aa18.99■□□□□ 0.63
SFXN1-208ENST00000507823 CNTN6Q9UQ52 1028 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms