RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 DEFB103AP81534 67 aa21.87■■□□□ 1.09
USP53-203ENST00000507597 TPD52L1Q16890 204 aaPredicted RBP21.87■■□□□ 1.09
USP53-203ENST00000507597 C9orf50Q5SZB4 431 aa21.87■■□□□ 1.09
USP53-203ENST00000507597 SLC39A4Q6P5W5 647 aa21.87■■□□□ 1.09
USP53-203ENST00000507597 HERC6Q8IVU3 1022 aa21.87■■□□□ 1.09
USP53-203ENST00000507597 SMG8Q8ND04 991 aaKnown RBP21.87■■□□□ 1.09
USP53-203ENST00000507597 TET1Q8NFU7 2136 aa21.87■■□□□ 1.09
USP53-203ENST00000507597 NELFBQ8WX92 580 aa21.87■■□□□ 1.09
USP53-203ENST00000507597 RAD9AQ99638 391 aa21.87■■□□□ 1.09
USP53-203ENST00000507597 APOL6Q9BWW8 343 aa21.87■■□□□ 1.09
USP53-203ENST00000507597 TMEM117Q9H0C3 514 aa21.87■■□□□ 1.09
USP53-203ENST00000507597 NXF3Q9H4D5 531 aaKnown RBP21.87■■□□□ 1.09
USP53-203ENST00000507597 PCIF1Q9H4Z3 704 aa21.87■■□□□ 1.09
USP53-203ENST00000507597 CXXC1Q9P0U4 656 aaPredicted RBP21.87■■□□□ 1.09
USP53-203ENST00000507597 RWDD2AQ9UIY3 292 aa21.87■■□□□ 1.09
USP53-203ENST00000507597 ABLIM1O14639 778 aa21.86■■□□□ 1.09
USP53-203ENST00000507597 XPOTO43592 962 aaKnown RBP21.86■■□□□ 1.09
USP53-203ENST00000507597 GJB5O95377 273 aa21.86■■□□□ 1.09
USP53-203ENST00000507597 NR3C1P04150 777 aa21.86■■□□□ 1.09
USP53-203ENST00000507597 BMP6P22004 513 aa21.86■■□□□ 1.09
USP53-203ENST00000507597 ADAM9Q13443 819 aa21.86■■□□□ 1.09
USP53-203ENST00000507597 NOC3LQ8WTT2 800 aaKnown RBP21.86■■□□□ 1.09
USP53-203ENST00000507597 CBWD1Q9BRT8 395 aa21.86■■□□□ 1.09
USP53-203ENST00000507597 PDE4DIPQ5VU43 2346 aa21.85■■□□□ 1.09
USP53-203ENST00000507597 TLL1O43897 1013 aa21.85■■□□□ 1.09
USP53-203ENST00000507597 IL18RAPO95256 599 aa21.85■■□□□ 1.09
USP53-203ENST00000507597 CAVIN2O95810 425 aa21.85■■□□□ 1.09
USP53-203ENST00000507597 NR2F2P24468 414 aa21.85■■□□□ 1.09
USP53-203ENST00000507597 CYP2J2P51589 502 aa21.85■■□□□ 1.09
USP53-203ENST00000507597 OSTNP61366 133 aa21.85■■□□□ 1.09
USP53-203ENST00000507597 PPP2R3AQ06190 1150 aa21.85■■□□□ 1.09
USP53-203ENST00000507597 FAM193BQ96PV7 902 aaPredicted RBP21.85■■□□□ 1.09
USP53-203ENST00000507597 FAM213AQ9BRX8 229 aa21.85■■□□□ 1.09
USP53-203ENST00000507597 SEMA6BQ9H3T3 888 aa21.85■■□□□ 1.09
USP53-203ENST00000507597 ASB7Q9H672 318 aa21.85■■□□□ 1.09
USP53-203ENST00000507597 MSRAQ9UJ68 235 aa21.85■■□□□ 1.09
USP53-203ENST00000507597 CPSF3Q9UKF6 684 aaKnown RBP21.85■■□□□ 1.09
USP53-203ENST00000507597 CTNND2Q9UQB3 1225 aa21.85■■□□□ 1.09
USP53-203ENST00000507597 MICAL3Q7RTP6 2002 aa21.84■■□□□ 1.09
USP53-203ENST00000507597 MAPK13O15264 365 aa21.84■■□□□ 1.09
USP53-203ENST00000507597 DGKIO75912 1065 aa21.84■■□□□ 1.09
USP53-203ENST00000507597 RECQL4O94761 1208 aa21.84■■□□□ 1.09
USP53-203ENST00000507597 AKAP5P24588 427 aa21.84■■□□□ 1.09
USP53-203ENST00000507597 TYRO3Q06418 890 aa21.84■■□□□ 1.09
USP53-203ENST00000507597 RAB30Q15771 203 aa21.84■■□□□ 1.09
USP53-203ENST00000507597 NOMO2Q5JPE7 1267 aa21.84■■□□□ 1.09
USP53-203ENST00000507597 AGMOQ6ZNB7 445 aa21.84■■□□□ 1.09
USP53-203ENST00000507597 CMTR2Q8IYT2 770 aaKnown RBP21.84■■□□□ 1.09
USP53-203ENST00000507597 CEP63Q96MT8 703 aa21.84■■□□□ 1.09
USP53-203ENST00000507597 MKNK1Q9BUB5 465 aa21.84■■□□□ 1.09
USP53-203ENST00000507597 SLC38A7Q9NVC3 462 aa21.84■■□□□ 1.09
USP53-203ENST00000507597 DMAC2Q9NW81 257 aa21.84■■□□□ 1.09
USP53-203ENST00000507597 PCDH10Q9P2E7 1040 aa21.84■■□□□ 1.09
USP53-203ENST00000507597 HES2Q9Y543 173 aa21.84■■□□□ 1.09
USP53-203ENST00000507597 TBKBP1A7MCY6 615 aa21.83■■□□□ 1.09
USP53-203ENST00000507597 TISP43B9A030 160 aa21.83■■□□□ 1.09
USP53-203ENST00000507597 OFD1O75665 1012 aa21.83■■□□□ 1.09
USP53-203ENST00000507597 GNA14O95837 355 aa21.83■■□□□ 1.09
USP53-203ENST00000507597 EPB41P11171 864 aaKnown RBP21.83■■□□□ 1.09
USP53-203ENST00000507597 CD44P16070 742 aaKnown RBP21.83■■□□□ 1.09
USP53-203ENST00000507597 ATF7P17544 494 aaPredicted RBP21.83■■□□□ 1.09
USP53-203ENST00000507597 PSMC2P35998 433 aaKnown RBP21.83■■□□□ 1.09
USP53-203ENST00000507597 ACOT2P49753 483 aa21.83■■□□□ 1.09
USP53-203ENST00000507597 RNASELQ05823 741 aaKnown RBP21.83■■□□□ 1.09
USP53-203ENST00000507597 BTG3Q14201 252 aaPredicted RBP21.83■■□□□ 1.09
USP53-203ENST00000507597 DPCR1Q3MIW9 517 aa21.83■■□□□ 1.09
USP53-203ENST00000507597 ZSCAN23Q3MJ62 389 aa21.83■■□□□ 1.09
USP53-203ENST00000507597 ZCWPW2Q504Y3 356 aa21.83■■□□□ 1.09
USP53-203ENST00000507597 CEP135Q66GS9 1140 aa21.83■■□□□ 1.09
USP53-203ENST00000507597 ANKRD40Q6AI12 368 aa21.83■■□□□ 1.09
USP53-203ENST00000507597 FAM117BQ6P1L5 589 aa21.83■■□□□ 1.09
USP53-203ENST00000507597 NT5DC4Q86YG4 428 aa21.83■■□□□ 1.09
USP53-203ENST00000507597 CRIPAKQ8N1N5 446 aa21.83■■□□□ 1.09
USP53-203ENST00000507597 HELQQ8TDG4 1101 aa21.83■■□□□ 1.09
USP53-203ENST00000507597 LPPQ93052 612 aa21.83■■□□□ 1.09
USP53-203ENST00000507597 FBXL18Q96ME1 805 aa21.83■■□□□ 1.09
USP53-203ENST00000507597 HAPLN2Q9GZV7 340 aa21.83■■□□□ 1.09
USP53-203ENST00000507597 RBAKQ9NYW8 714 aaPredicted RBP21.83■■□□□ 1.09
USP53-203ENST00000507597 PCDHA11Q9Y5I1 949 aa21.83■■□□□ 1.09
USP53-203ENST00000507597 SYCE3A1L190 88 aa21.82■■□□□ 1.08
USP53-203ENST00000507597 INPPL1O15357 1258 aa21.82■■□□□ 1.08
USP53-203ENST00000507597 THP07101 528 aa21.82■■□□□ 1.08
USP53-203ENST00000507597 KRT13P13646 458 aa21.82■■□□□ 1.08
USP53-203ENST00000507597 HTRA4P83105 476 aaPredicted RBP21.82■■□□□ 1.08
USP53-203ENST00000507597 SNRNP35Q16560 246 aaKnown RBP21.82■■□□□ 1.08
USP53-203ENST00000507597 LRRC43Q8N309 656 aa21.82■■□□□ 1.08
USP53-203ENST00000507597 CSGALNACT2Q8N6G5 542 aa21.82■■□□□ 1.08
USP53-203ENST00000507597 CEP120Q8N960 986 aa21.82■■□□□ 1.08
USP53-203ENST00000507597 CACTINQ8WUQ7 758 aaKnown RBP21.82■■□□□ 1.08
USP53-203ENST00000507597 ZNF689Q96CS4 500 aaPredicted RBP21.82■■□□□ 1.08
USP53-203ENST00000507597 FAM212AQ96EL1 285 aa21.82■■□□□ 1.08
USP53-203ENST00000507597 SAAL1Q96ER3 474 aa21.82■■□□□ 1.08
USP53-203ENST00000507597 FNBP1Q96RU3 617 aa21.82■■□□□ 1.08
USP53-203ENST00000507597 RNF39Q9H2S5 420 aa21.82■■□□□ 1.08
USP53-203ENST00000507597 PRO3102Q9H379 93 aa21.82■■□□□ 1.08
USP53-203ENST00000507597 METTL14Q9HCE5 456 aaKnown RBP21.82■■□□□ 1.08
USP53-203ENST00000507597 AAASQ9NRG9 546 aa21.82■■□□□ 1.08
USP53-203ENST00000507597 INPP5FQ9Y2H2 1132 aa21.82■■□□□ 1.08
USP53-203ENST00000507597 DERAQ9Y315 318 aa21.82■■□□□ 1.08
USP53-203ENST00000507597 RWDD3Q9Y3V2 267 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms