RNA–Protein interactions for RNA: ENST00000507292.1

SRPK1-208, Transcript of SRSF protein kinase 1, humanhuman

TSL 3

Gene SRPK1, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-208ENST00000507292 PHACTR3Q96KR7 559 aa3.41□□□□□ -1.86
SRPK1-208ENST00000507292 CDC5LQ99459 802 aaKnown RBP3.41□□□□□ -1.86
SRPK1-208ENST00000507292 RNF181Q9P0P0 153 aa3.41□□□□□ -1.86
SRPK1-208ENST00000507292 TESQ9UGI8 421 aaKnown RBP3.41□□□□□ -1.86
SRPK1-208ENST00000507292 EVLQ9UI08 416 aaPredicted RBP3.41□□□□□ -1.86
SRPK1-208ENST00000507292 hCG_2014768A0A024R1R8 64 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 TBKBP1A7MCY6 615 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 B5MCH6 92 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 PPM1GO15355 546 aaPredicted RBP3.4□□□□□ -1.87
SRPK1-208ENST00000507292 ITGA10O75578 1167 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 ESRRBO95718 433 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 LTA4HP09960 611 aaKnown RBP3.4□□□□□ -1.87
SRPK1-208ENST00000507292 SPATA31D3P0C874 917 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 RBP3P10745 1247 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 MASP1P48740 699 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 GPR15P49685 360 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 KPNA1P52294 538 aaPredicted RBP3.4□□□□□ -1.87
SRPK1-208ENST00000507292 ANAPC15P60006 121 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 IGBP1P78318 339 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 SART3Q15020 963 aaKnown RBP3.4□□□□□ -1.87
SRPK1-208ENST00000507292 PTPROQ16827 1216 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 FAM102AQ5T9C2 384 aaPredicted RBP3.4□□□□□ -1.87
SRPK1-208ENST00000507292 ABHD17BQ5VST6 288 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 ABHD15Q6UXT9 468 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 SPATA31D4Q6ZUB0 917 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 LRRTM3Q86VH5 581 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 GLB1L2Q8IW92 636 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 ANKRD13AQ8IZ07 590 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 FAM98AQ8NCA5 519 aaKnown RBP3.4□□□□□ -1.87
SRPK1-208ENST00000507292 CHAC2Q8WUX2 184 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 CEP95Q96GE4 821 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 GPR101Q96P66 508 aaPredicted RBP3.4□□□□□ -1.87
SRPK1-208ENST00000507292 PUS7Q96PZ0 661 aaKnown RBP3.4□□□□□ -1.87
SRPK1-208ENST00000507292 NEU1Q99519 415 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 ORAI3Q9BRQ5 295 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 LRFN3Q9BTN0 628 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 SPATA5L1Q9BVQ7 753 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 ANO3Q9BYT9 981 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 MTFR1LQ9H019 292 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 TMPRSS11EQ9UL52 423 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 PPP2R3BQ9Y5P8 575 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 FPGT-TNNI3KV9GXZ4 949 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 SALL3Q9BXA9 1300 aa3.4□□□□□ -1.87
SRPK1-208ENST00000507292 SETD1BQ9UPS6 1966 aaKnown RBP3.4□□□□□ -1.87
SRPK1-208ENST00000507292 MARCH11A6NNE9 402 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 INO80B-WBP1J3KQ70 363 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 PDE8AO60658 829 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 EGR2P11161 476 aaPredicted RBP3.39□□□□□ -1.87
SRPK1-208ENST00000507292 MGAT1P26572 445 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 MPLP40238 635 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 CHN2P52757 468 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 ELLP55199 621 aaPredicted RBP3.39□□□□□ -1.87
SRPK1-208ENST00000507292 MPP3Q13368 585 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 TRIM25Q14258 630 aaKnown RBP3.39□□□□□ -1.87
SRPK1-208ENST00000507292 BMT2Q1RMZ1 405 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 CCDC178Q5BJE1 867 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 MFSD14BQ5SR56 506 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 PAPD7Q5XG87 772 aaKnown RBP3.39□□□□□ -1.87
SRPK1-208ENST00000507292 METRNLQ641Q3 311 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 DDX46Q7L014 1031 aaKnown RBP3.39□□□□□ -1.87
SRPK1-208ENST00000507292 KRT26Q7Z3Y9 468 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 KIF18BQ86Y91 864 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 LYSMD2Q8IV50 215 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 NELL1Q92832 810 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 INO80BQ9C086 356 aaPredicted RBP3.39□□□□□ -1.87
SRPK1-208ENST00000507292 PRDM12Q9H4Q4 367 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 CAAP1Q9H8G2 361 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 KIAA1586Q9HCI6 787 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 PRSS50Q9UI38 385 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 TLK1Q9UKI8 766 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 MAPRE3Q9UPY8 281 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 NUMBLQ9Y6R0 609 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 KAT6AQ92794 2004 aa3.39□□□□□ -1.87
SRPK1-208ENST00000507292 FAM83GA6ND36 823 aa3.38□□□□□ -1.87
SRPK1-208ENST00000507292 TMEM127O75204 238 aa3.38□□□□□ -1.87
SRPK1-208ENST00000507292 CDKL5O76039 1030 aa3.38□□□□□ -1.87
SRPK1-208ENST00000507292 C1RP00736 705 aa3.38□□□□□ -1.87
SRPK1-208ENST00000507292 ERBB2P04626 1255 aa3.38□□□□□ -1.87
SRPK1-208ENST00000507292 LSP1P33241 339 aa3.38□□□□□ -1.87
SRPK1-208ENST00000507292 MANFP55145 182 aaKnown RBP3.38□□□□□ -1.87
SRPK1-208ENST00000507292 PCBP1Q15365 356 aaKnown RBP eCLIP3.38□□□□□ -1.87
SRPK1-208ENST00000507292 DDB1Q16531 1140 aa3.38□□□□□ -1.87
SRPK1-208ENST00000507292 C19orf54Q5BKX5 351 aa3.38□□□□□ -1.87
SRPK1-208ENST00000507292 EPHA10Q5JZY3 1008 aa3.38□□□□□ -1.87
SRPK1-208ENST00000507292 PRAMEF14Q5SWL7 426 aa3.38□□□□□ -1.87
SRPK1-208ENST00000507292 ZNF362Q5T0B9 420 aaPredicted RBP3.38□□□□□ -1.87
SRPK1-208ENST00000507292 HDGFL2Q7Z4V5 671 aaPredicted RBP3.38□□□□□ -1.87
SRPK1-208ENST00000507292 ZNF610Q8N9Z0 462 aa3.38□□□□□ -1.87
SRPK1-208ENST00000507292 ZFP28Q8NHY6 868 aa3.38□□□□□ -1.87
SRPK1-208ENST00000507292 SLC35B2Q8TB61 432 aa3.38□□□□□ -1.87
SRPK1-208ENST00000507292 CAGE1Q8TC20 777 aa3.38□□□□□ -1.87
SRPK1-208ENST00000507292 SNX33Q8WV41 574 aa3.38□□□□□ -1.87
SRPK1-208ENST00000507292 BRINP2Q9C0B6 783 aa3.38□□□□□ -1.87
SRPK1-208ENST00000507292 ALG13Q9NP73 1137 aaKnown RBP3.38□□□□□ -1.87
SRPK1-208ENST00000507292 SPTLC3Q9NUV7 552 aa3.38□□□□□ -1.87
SRPK1-208ENST00000507292 GPRC5DQ9NZD1 345 aa3.38□□□□□ -1.87
SRPK1-208ENST00000507292 FRMD4BQ9Y2L6 1034 aa3.38□□□□□ -1.87
SRPK1-208ENST00000507292 NOP58Q9Y2X3 529 aaKnown RBP3.38□□□□□ -1.87
SRPK1-208ENST00000507292 COL4A3BPQ9Y5P4 624 aa3.38□□□□□ -1.87
SRPK1-208ENST00000507292 DRGXA6NNA5 263 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms