RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 ASXL2Q76L83 1435 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 LILRB3O75022 631 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 PEX11AO75192 247 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 RARAP10276 462 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 COPS2P61201 443 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 SF3B4Q15427 424 aaKnown RBP eCLIP6.56□□□□□ -1.361e-7■■□□□ 14.5
PDE4D-216ENST00000507116 SMU1Q2TAY7 513 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 LEXMQ3ZCV2 418 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 HYIQ5T013 277 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 TMEM63BQ5T3F8 832 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 SLFN13Q68D06 897 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 ANGPTL8Q6UXH0 198 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 ARHGAP36Q6ZRI8 547 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 TOGARAM2Q6ZUX3 1019 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 STK32CQ86UX6 486 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 CCNYL1Q8N7R7 359 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 ZNF565Q8N9K5 539 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 TMC2Q8TDI7 906 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 TTC17Q96AE7 1141 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 DACT3Q96B18 629 aaPredicted RBP6.56□□□□□ -1.36
PDE4D-216ENST00000507116 ARL5BQ96KC2 179 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 TNIP3Q96KP6 325 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 ZIM3Q96PE6 472 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 NUDCD1Q96RS6 583 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 DENND2DQ9H6A0 471 aaPredicted RBP6.56□□□□□ -1.36
PDE4D-216ENST00000507116 ZNF287Q9HBT7 754 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 TAS2R7Q9NYW3 318 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 KIF17Q9P2E2 1029 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 GRID1Q9ULK0 1009 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 RPL26L1Q9UNX3 145 aaKnown RBP6.56□□□□□ -1.36
PDE4D-216ENST00000507116 CDC42BPAQ5VT25 1732 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 PASKQ96RG2 1323 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 JCADQ9P266 1359 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 CYP2D7A0A087X1C5 515 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 FAM237AA0A1B0GTK4 181 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 PVALEFA0A1B0GWK0 134 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 SMCO2A6NFE2 343 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 SIGLEC16A6NMB1 481 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 NR1I2O75469 434 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 GMNNO75496 209 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 ARIH2O95376 493 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 APBB3O95704 486 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 RCVRNP35243 200 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 SCNN1DP51172 638 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 RAC1P63000 192 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 CSTF3Q12996 717 aaKnown RBP6.56□□□□□ -1.36
PDE4D-216ENST00000507116 HERC4Q5GLZ8 1057 aaPredicted RBP6.56□□□□□ -1.36
PDE4D-216ENST00000507116 C16orf54Q6UWD8 224 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 TAS1R3Q7RTX0 852 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 KCTD20Q7Z5Y7 419 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 LRRC47Q8N1G4 583 aaKnown RBP6.56□□□□□ -1.36
PDE4D-216ENST00000507116 DTX3Q8N9I9 347 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 CHMP6Q96FZ7 201 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 BTBD6Q96KE9 485 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 GAL3ST1Q99999 423 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 ASCC2Q9H1I8 757 aaPredicted RBP6.56□□□□□ -1.36
PDE4D-216ENST00000507116 SH2D4AQ9H788 454 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 MRPL40Q9NQ50 206 aaKnown RBP6.56□□□□□ -1.36
PDE4D-216ENST00000507116 STARD7Q9NQZ5 370 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 TBC1D23Q9NUY8 699 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 TNFRSF10DQ9UBN6 386 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 PGAP2Q9UHJ9 254 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 MAGED1Q9Y5V3 778 aaPredicted RBP6.56□□□□□ -1.36
PDE4D-216ENST00000507116 TSPOAP1O95153 1857 aa6.56□□□□□ -1.36
PDE4D-216ENST00000507116 RTCAO00442 366 aaKnown RBP6.55□□□□□ -1.36
PDE4D-216ENST00000507116 VWA5AO00534 786 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 RGS13O14921 159 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 DKC1O60832 514 aaKnown RBP eCLIP6.55□□□□□ -1.361e-6■■□□□ 12.2
PDE4D-216ENST00000507116 PLEKHA8P1O95397 391 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 IFNA14P01570 189 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 GSPT1P15170 499 aaKnown RBP6.55□□□□□ -1.36
PDE4D-216ENST00000507116 GNG2P59768 71 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 ZNF124Q15973 351 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 WASHC2DQ5SRD0 308 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 HAUS3Q68CZ6 603 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 GSPT2Q8IYD1 628 aaKnown RBP6.55□□□□□ -1.36
PDE4D-216ENST00000507116 ELMOD2Q8IZ81 293 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 SLC47A1Q96FL8 570 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 REXO5Q96IC2 774 aaKnown RBP6.55□□□□□ -1.36
PDE4D-216ENST00000507116 CCDC138Q96M89 665 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 PITHD1Q9GZP4 211 aaPredicted RBP6.55□□□□□ -1.36
PDE4D-216ENST00000507116 VPS11Q9H270 941 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 DCLRE1BQ9H816 532 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 MMRN2Q9H8L6 949 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 CYP4F11Q9HBI6 524 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 TRNAU1APQ9NX07 287 aaKnown RBP6.55□□□□□ -1.36
PDE4D-216ENST00000507116 STMN3Q9NZ72 180 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 MALT1Q9UDY8 824 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 SLC7A8Q9UHI5 535 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 AP3M1Q9Y2T2 418 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 MAFBQ9Y5Q3 323 aaPredicted RBP6.55□□□□□ -1.36
PDE4D-216ENST00000507116 EPN1Q9Y6I3 576 aaPredicted RBP6.55□□□□□ -1.36
PDE4D-216ENST00000507116 ARHGAP35Q9NRY4 1499 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 C1orf232A0A0U1RR37 186 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 TSPY2A6NKD2 308 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 KRIT1O00522 736 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 APAF1O14727 1248 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 XPO1O14980 1071 aaKnown RBP6.55□□□□□ -1.36
PDE4D-216ENST00000507116 ZBTB39O15060 712 aa6.55□□□□□ -1.36
PDE4D-216ENST00000507116 KPNA5O15131 536 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms