RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 VN1R2Q8NFZ6 395 aa17.1■□□□□ 0.33
CLDND1-211ENST00000506575 CASP10Q92851 521 aa17.1■□□□□ 0.33
CLDND1-211ENST00000506575 REEP2Q9BRK0 252 aa17.1■□□□□ 0.33
CLDND1-211ENST00000506575 TARS2Q9BW92 718 aaKnown RBP17.1■□□□□ 0.33
CLDND1-211ENST00000506575 VN1R3Q9BXE9 311 aa17.1■□□□□ 0.33
CLDND1-211ENST00000506575 MRPL17Q9NRX2 175 aaKnown RBP17.1■□□□□ 0.33
CLDND1-211ENST00000506575 CLASP2O75122 1294 aaKnown RBP17.09■□□□□ 0.33
CLDND1-211ENST00000506575 TBCAO75347 108 aaKnown RBP17.09■□□□□ 0.33
CLDND1-211ENST00000506575 SOD2P04179 222 aa17.09■□□□□ 0.33
CLDND1-211ENST00000506575 URODP06132 367 aa17.09■□□□□ 0.33
CLDND1-211ENST00000506575 DDIT3P35638 169 aa17.09■□□□□ 0.33
CLDND1-211ENST00000506575 TUSC3Q13454 348 aa17.09■□□□□ 0.33
CLDND1-211ENST00000506575 PTPN14Q15678 1187 aa17.09■□□□□ 0.33
CLDND1-211ENST00000506575 FOXD4L5Q5VV16 416 aaPredicted RBP17.09■□□□□ 0.33
CLDND1-211ENST00000506575 ANKRD54Q6NXT1 300 aa17.09■□□□□ 0.33
CLDND1-211ENST00000506575 TMEM184AQ6ZMB5 413 aa17.09■□□□□ 0.33
CLDND1-211ENST00000506575 USP49Q70CQ1 688 aa17.09■□□□□ 0.33
CLDND1-211ENST00000506575 TAS1R3Q7RTX0 852 aa17.09■□□□□ 0.33
CLDND1-211ENST00000506575 ZBTB33Q86T24 672 aa17.09■□□□□ 0.33
CLDND1-211ENST00000506575 GJD3Q8N144 294 aa17.09■□□□□ 0.33
CLDND1-211ENST00000506575 MYCT1Q8N699 235 aa17.09■□□□□ 0.33
CLDND1-211ENST00000506575 SPRYD3Q8NCJ5 442 aa17.09■□□□□ 0.33
CLDND1-211ENST00000506575 TMEM161BQ8NDZ6 487 aa17.09■□□□□ 0.33
CLDND1-211ENST00000506575 FOXD4L4Q8WXT5 416 aaPredicted RBP17.09■□□□□ 0.33
CLDND1-211ENST00000506575 CLIC6Q96NY7 704 aa17.09■□□□□ 0.33
CLDND1-211ENST00000506575 POP1Q99575 1024 aaKnown RBP17.09■□□□□ 0.33
CLDND1-211ENST00000506575 HERC2P3Q9BVR0 1158 aa17.09■□□□□ 0.33
CLDND1-211ENST00000506575 CCDC94Q9BW85 323 aaPredicted RBP17.09■□□□□ 0.33
CLDND1-211ENST00000506575 EMILIN2Q9BXX0 1053 aa17.09■□□□□ 0.33
CLDND1-211ENST00000506575 ZHX3Q9H4I2 956 aa17.09■□□□□ 0.33
CLDND1-211ENST00000506575 TOPORSQ9NS56 1045 aaPredicted RBP17.09■□□□□ 0.33
CLDND1-211ENST00000506575 MARCH5Q9NX47 278 aa17.09■□□□□ 0.33
CLDND1-211ENST00000506575 SSX2IPQ9Y2D8 614 aa17.09■□□□□ 0.33
CLDND1-211ENST00000506575 HCFC2Q9Y5Z7 792 aa17.09■□□□□ 0.33
CLDND1-211ENST00000506575 MORC2Q9Y6X9 1032 aaPredicted RBP17.09■□□□□ 0.33
CLDND1-211ENST00000506575 C5orf42Q9H799 3197 aa17.08■□□□□ 0.33
CLDND1-211ENST00000506575 TRIP11Q15643 1979 aa17.08■□□□□ 0.33
CLDND1-211ENST00000506575 TADA2AO75478 443 aa17.08■□□□□ 0.32
CLDND1-211ENST00000506575 MAPTP10636 758 aaKnown RBP17.08■□□□□ 0.32
CLDND1-211ENST00000506575 MCF2P10911 925 aa17.08■□□□□ 0.32
CLDND1-211ENST00000506575 NASPP49321 788 aaPredicted RBP17.08■□□□□ 0.32
CLDND1-211ENST00000506575 NCKAP1LP55160 1127 aa17.08■□□□□ 0.32
CLDND1-211ENST00000506575 KCNC3Q14003 757 aa17.08■□□□□ 0.32
CLDND1-211ENST00000506575 TPRNQ4KMQ1 711 aa17.08■□□□□ 0.32
CLDND1-211ENST00000506575 RRAGBQ5VZM2 374 aa17.08■□□□□ 0.32
CLDND1-211ENST00000506575 KIAA1841Q6NSI8 718 aa17.08■□□□□ 0.32
CLDND1-211ENST00000506575 MPZL3Q6UWV2 235 aa17.08■□□□□ 0.32
CLDND1-211ENST00000506575 PPFIBP1Q86W92 1011 aa17.08■□□□□ 0.32
CLDND1-211ENST00000506575 ADHFE1Q8IWW8 467 aa17.08■□□□□ 0.32
CLDND1-211ENST00000506575 LRRC15Q8TF66 581 aa17.08■□□□□ 0.32
CLDND1-211ENST00000506575 BICD1Q96G01 975 aa17.08■□□□□ 0.32
CLDND1-211ENST00000506575 CDT1Q9H211 546 aa17.08■□□□□ 0.32
CLDND1-211ENST00000506575 PARVGQ9HBI0 331 aa17.08■□□□□ 0.32
CLDND1-211ENST00000506575 STK17AQ9UEE5 414 aa17.08■□□□□ 0.32
CLDND1-211ENST00000506575 ADAM28Q9UKQ2 775 aa17.08■□□□□ 0.32
CLDND1-211ENST00000506575 USP15Q9Y4E8 981 aaPredicted RBP17.08■□□□□ 0.32
CLDND1-211ENST00000506575 CASTOR2A6NHX0 329 aa17.07■□□□□ 0.32
CLDND1-211ENST00000506575 F8W810 466 aa17.07■□□□□ 0.32
CLDND1-211ENST00000506575 K7ENM7 598 aa17.07■□□□□ 0.32
CLDND1-211ENST00000506575 C2CD2LO14523 706 aa17.07■□□□□ 0.32
CLDND1-211ENST00000506575 PTGESO14684 152 aa17.07■□□□□ 0.32
CLDND1-211ENST00000506575 ZSCAN22P10073 491 aaPredicted RBP17.07■□□□□ 0.32
CLDND1-211ENST00000506575 HARSP12081 509 aaKnown RBP17.07■□□□□ 0.32
CLDND1-211ENST00000506575 HOXB8P17481 243 aaPredicted RBP17.07■□□□□ 0.32
CLDND1-211ENST00000506575 SCP2P22307 547 aa17.07■□□□□ 0.32
CLDND1-211ENST00000506575 KLRC2P26717 231 aa17.07■□□□□ 0.32
CLDND1-211ENST00000506575 GRM5P41594 1212 aa17.07■□□□□ 0.32
CLDND1-211ENST00000506575 MATR3P43243 847 aaKnown RBP eCLIP17.07■□□□□ 0.32
CLDND1-211ENST00000506575 GLUD2P49448 558 aa17.07■□□□□ 0.32
CLDND1-211ENST00000506575 OSTNP61366 133 aa17.07■□□□□ 0.32
CLDND1-211ENST00000506575 ZP2Q05996 745 aa17.07■□□□□ 0.32
CLDND1-211ENST00000506575 HSP90AA2PQ14568 343 aaPredicted RBP17.07■□□□□ 0.32
CLDND1-211ENST00000506575 HAUS6Q7Z4H7 955 aa17.07■□□□□ 0.32
CLDND1-211ENST00000506575 PTPRHQ9HD43 1115 aa17.07■□□□□ 0.32
CLDND1-211ENST00000506575 ANKFY1Q9P2R3 1169 aa17.07■□□□□ 0.32
CLDND1-211ENST00000506575 CITO14578 2027 aa17.07■□□□□ 0.32
CLDND1-211ENST00000506575 SPDYE4A6NLX3 237 aa17.06■□□□□ 0.32
CLDND1-211ENST00000506575 SPTLC2O15270 562 aa17.06■□□□□ 0.32
CLDND1-211ENST00000506575 TOM1L1O75674 476 aa17.06■□□□□ 0.32
CLDND1-211ENST00000506575 PROZP22891 400 aa17.06■□□□□ 0.32
CLDND1-211ENST00000506575 ZNF131P52739 623 aa17.06■□□□□ 0.32
CLDND1-211ENST00000506575 NOLC1Q14978 699 aaKnown RBP eCLIP17.06■□□□□ 0.32
CLDND1-211ENST00000506575 USP41Q3LFD5 358 aa17.06■□□□□ 0.32
CLDND1-211ENST00000506575 FUT10Q6P4F1 479 aa17.06■□□□□ 0.32
CLDND1-211ENST00000506575 ZPBP2Q6X784 338 aa17.06■□□□□ 0.32
CLDND1-211ENST00000506575 CCDC73Q6ZRK6 1079 aa17.06■□□□□ 0.32
CLDND1-211ENST00000506575 SV2BQ7L1I2 683 aa17.06■□□□□ 0.32
CLDND1-211ENST00000506575 TAS1R1Q7RTX1 841 aa17.06■□□□□ 0.32
CLDND1-211ENST00000506575 CEP120Q8N960 986 aa17.06■□□□□ 0.32
CLDND1-211ENST00000506575 LINC00301Q8NCQ3 95 aa17.06■□□□□ 0.32
CLDND1-211ENST00000506575 RABGGTAQ92696 567 aa17.06■□□□□ 0.32
CLDND1-211ENST00000506575 ACAP3Q96P50 834 aa17.06■□□□□ 0.32
CLDND1-211ENST00000506575 APOL5Q9BWW9 433 aa17.06■□□□□ 0.32
CLDND1-211ENST00000506575 CD320Q9NPF0 282 aa17.06■□□□□ 0.32
CLDND1-211ENST00000506575 DZANK1Q9NVP4 752 aa17.06■□□□□ 0.32
CLDND1-211ENST00000506575 TFIP11Q9UBB9 837 aaKnown RBP17.06■□□□□ 0.32
CLDND1-211ENST00000506575 SF3B1O75533 1304 aaKnown RBP eCLIP17.05■□□□□ 0.32
CLDND1-211ENST00000506575 CLDN3O15551 220 aa17.05■□□□□ 0.32
CLDND1-211ENST00000506575 TRAK2O60296 914 aa17.05■□□□□ 0.32
CLDND1-211ENST00000506575 F13A1P00488 732 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms