RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 TARDBPQ13148 414 aaKnown RBP eCLIP5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 GTF2H3Q13889 308 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 MLC1Q15049 377 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 ELAVL1Q15717 326 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 FAM47AQ5JRC9 791 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 LCE3BQ5TA77 95 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 SPTY2D1Q68D10 685 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 ANKS6Q68DC2 871 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 PPP4R3AQ6IN85 833 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 Q6ZSN1 163 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 EPM2AIP1Q7L775 607 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 ZNF572Q7Z3I7 529 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 C14orf80Q86SX3 495 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 RSPH3Q86UC2 560 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 SGMS1Q86VZ5 419 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 TCEAL8Q8IYN2 117 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 SLC35B2Q8TB61 432 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 HPS3Q969F9 1004 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 CLIP3Q96DZ5 547 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 BORCS6Q96GS4 357 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 AIFM3Q96NN9 605 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 DMRTA2Q96SC8 542 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 MPHOSPH9Q99550 1183 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 CPPED1Q9BRF8 314 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 ANLNQ9NQW6 1124 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 HECAQ9UBI9 543 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 ACTL7AQ9Y615 435 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 ATRNL1Q5VV63 1379 aa5.26□□□□□ -1.57
TOPBP1-204ENST00000505804 MFAP3LO75121 409 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 OFD1O75665 1012 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 IL2RBP14784 551 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 ALOX15P16050 662 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 COMTP21964 271 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 FLT3LGP49771 235 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 PGS1Q32NB8 556 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 ATAT1Q5SQI0 421 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 AFMIDQ63HM1 303 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 MFSD5Q6N075 450 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 CXorf57Q6NSI4 855 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 DRC7Q8IY82 874 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 GRAMD1CQ8IYS0 662 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 MAGEB6Q8N7X4 407 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 SLC35G2Q8TBE7 412 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 MVB12AQ96EY5 273 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 TMX3Q96JJ7 454 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 CLPTM1LQ96KA5 538 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 SAMD11Q96NU1 681 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 LSM14BQ9BX40 385 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 KCNH6Q9H252 994 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 SLC12A5Q9H2X9 1139 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 DEF6Q9H4E7 631 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 CD248Q9HCU0 757 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 TMEM140Q9NV12 185 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 HDAC5Q9UQL6 1122 aa5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 CFAP20Q9Y6A4 193 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-204ENST00000505804 CXorf49A8MYA2 514 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 K7ESM1 405 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 SGTAO43765 313 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 GPR32O75388 356 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 RPLP2P05387 115 aaKnown RBP5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 RAP2AP10114 183 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 HSPA6P17066 643 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 GNAT2P19087 354 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 ACO1P21399 889 aaKnown RBP5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 ALDH1A3P47895 512 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 ZNF280AP59817 542 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 CDC42EP1Q00587 391 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 HHEXQ03014 270 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 SP140Q13342 867 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 MTM1Q13496 603 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 ERICH6BQ5W0A0 696 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 NXNQ6DKJ4 435 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 ZNF585AQ6P3V2 769 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 B3GNT9Q6UX72 402 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 APBB1IPQ7Z5R6 666 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 TTC7BQ86TV6 843 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 FAM83AQ86UY5 434 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 GSPT2Q8IYD1 628 aaKnown RBP5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 ZNF808Q8N4W9 903 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 CHST13Q8NET6 341 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 ST8SIA2Q92186 375 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 MAP3K14Q99558 947 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 MYOCQ99972 504 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 VRK1Q99986 396 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 MRI1Q9BV20 369 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 NMRK2Q9NPI5 230 aa5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 RUVBL1Q9Y265 456 aaKnown RBP5.24□□□□□ -1.57
TOPBP1-204ENST00000505804 PNPLA7Q6ZV29 1317 aa5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 LRRC14BA6NHZ5 514 aa5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 TBKBP1A7MCY6 615 aa5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 CAPN14A8MX76 684 aa5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 DTNBO60941 627 aa5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 U2AF1L5P0DN76 240 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 MYBP10242 640 aa5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 HK1P19367 917 aa5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 HIBADHP31937 336 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 ATP8B2P98198 1209 aa5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 U2AF1Q01081 240 aaKnown RBP eCLIP5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 PTH1RQ03431 593 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms