RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 HIBADHP31937 336 aaKnown RBP5.19□□□□□ -1.58
CHD1-203ENST00000505657 GUCY1A2P33402 732 aa5.19□□□□□ -1.58
CHD1-203ENST00000505657 PTPN7P35236 360 aa5.19□□□□□ -1.58
CHD1-203ENST00000505657 IL10RAQ13651 578 aa5.19□□□□□ -1.58
CHD1-203ENST00000505657 PRKD1Q15139 912 aaPredicted RBP5.19□□□□□ -1.58
CHD1-203ENST00000505657 MFSD5Q6N075 450 aa5.19□□□□□ -1.58
CHD1-203ENST00000505657 ZNF572Q7Z3I7 529 aaPredicted RBP5.19□□□□□ -1.58
CHD1-203ENST00000505657 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.19□□□□□ -1.58
CHD1-203ENST00000505657 SLC35B2Q8TB61 432 aa5.19□□□□□ -1.58
CHD1-203ENST00000505657 ATXN2LQ8WWM7 1075 aaKnown RBP5.19□□□□□ -1.58
CHD1-203ENST00000505657 ST8SIA2Q92186 375 aa5.19□□□□□ -1.58
CHD1-203ENST00000505657 EXTL1Q92935 676 aa5.19□□□□□ -1.58
CHD1-203ENST00000505657 COA7Q96BR5 231 aa5.19□□□□□ -1.58
CHD1-203ENST00000505657 MIEF2Q96C03 454 aa5.19□□□□□ -1.58
CHD1-203ENST00000505657 AASDHPPTQ9NRN7 309 aa5.19□□□□□ -1.58
CHD1-203ENST00000505657 AJAP1Q9UKB5 411 aaPredicted RBP5.19□□□□□ -1.58
CHD1-203ENST00000505657 LUC7L2Q9Y383 392 aaKnown RBP5.19□□□□□ -1.58
CHD1-203ENST00000505657 TSC22D4Q9Y3Q8 395 aa5.19□□□□□ -1.58
CHD1-203ENST00000505657 PCDHA13Q9Y5I0 950 aa5.19□□□□□ -1.58
CHD1-203ENST00000505657 ENDOD1O94919 500 aa5.18□□□□□ -1.58
CHD1-203ENST00000505657 SNUPNO95149 360 aaKnown RBP5.18□□□□□ -1.58
CHD1-203ENST00000505657 ALOX15P16050 662 aaPredicted RBP5.18□□□□□ -1.58
CHD1-203ENST00000505657 GNAT2P19087 354 aa5.18□□□□□ -1.58
CHD1-203ENST00000505657 ACRV1P26436 265 aa5.18□□□□□ -1.58
CHD1-203ENST00000505657 WASP42768 502 aa5.18□□□□□ -1.58
CHD1-203ENST00000505657 RECQLP46063 649 aaPredicted RBP5.18□□□□□ -1.58
CHD1-203ENST00000505657 FXR1P51114 621 aaKnown RBP eCLIP5.18□□□□□ -1.58
CHD1-203ENST00000505657 PER3P56645 1201 aa5.18□□□□□ -1.58
CHD1-203ENST00000505657 HHEXQ03014 270 aa5.18□□□□□ -1.58
CHD1-203ENST00000505657 TMEM240Q5SV17 173 aa5.18□□□□□ -1.58
CHD1-203ENST00000505657 GPRIN1Q7Z2K8 1008 aa5.18□□□□□ -1.58
CHD1-203ENST00000505657 APBB1IPQ7Z5R6 666 aaPredicted RBP5.18□□□□□ -1.58
CHD1-203ENST00000505657 SPRED1Q7Z699 444 aa5.18□□□□□ -1.58
CHD1-203ENST00000505657 Q8N1X5 172 aa5.18□□□□□ -1.58
CHD1-203ENST00000505657 CPA6Q8N4T0 437 aa5.18□□□□□ -1.58
CHD1-203ENST00000505657 RNF169Q8NCN4 708 aa5.18□□□□□ -1.58
CHD1-203ENST00000505657 OR52N2Q8NGI0 321 aa5.18□□□□□ -1.58
CHD1-203ENST00000505657 CCHCR1Q8TD31 782 aa5.18□□□□□ -1.58
CHD1-203ENST00000505657 KAT5Q92993 513 aa5.18□□□□□ -1.58
CHD1-203ENST00000505657 CPPED1Q9BRF8 314 aaPredicted RBP5.18□□□□□ -1.58
CHD1-203ENST00000505657 RTFDC1Q9BY42 306 aaPredicted RBP5.18□□□□□ -1.58
CHD1-203ENST00000505657 LANCL2Q9NS86 450 aa5.18□□□□□ -1.58
CHD1-203ENST00000505657 IP6K2Q9UHH9 426 aa5.18□□□□□ -1.58
CHD1-203ENST00000505657 ACTL7AQ9Y615 435 aa5.18□□□□□ -1.58
CHD1-203ENST00000505657 FAM171A2A8MVW0 826 aa5.17□□□□□ -1.58
CHD1-203ENST00000505657 CXorf49A8MYA2 514 aaPredicted RBP5.17□□□□□ -1.58
CHD1-203ENST00000505657 ABLIM3O94929 683 aa5.17□□□□□ -1.58
CHD1-203ENST00000505657 GDF5P43026 501 aa5.17□□□□□ -1.58
CHD1-203ENST00000505657 ALDH1A3P47895 512 aa5.17□□□□□ -1.58
CHD1-203ENST00000505657 FLT3LGP49771 235 aa5.17□□□□□ -1.58
CHD1-203ENST00000505657 RAB27AP51159 221 aa5.17□□□□□ -1.58
CHD1-203ENST00000505657 ADKP55263 362 aaKnown RBP5.17□□□□□ -1.58
CHD1-203ENST00000505657 TARDBPQ13148 414 aaKnown RBP eCLIP5.17□□□□□ -1.58
CHD1-203ENST00000505657 RRP1BQ14684 758 aaKnown RBP5.17□□□□□ -1.58
CHD1-203ENST00000505657 UAP1L1Q3KQV9 507 aa5.17□□□□□ -1.58
CHD1-203ENST00000505657 USP39Q53GS9 565 aaKnown RBP5.17□□□□□ -1.58
CHD1-203ENST00000505657 ODR4Q5SWX8 454 aa5.17□□□□□ -1.58
CHD1-203ENST00000505657 AFMIDQ63HM1 303 aa5.17□□□□□ -1.58
CHD1-203ENST00000505657 FAM180AQ6UWF9 173 aa5.17□□□□□ -1.58
CHD1-203ENST00000505657 DOK3Q7L591 496 aa5.17□□□□□ -1.58
CHD1-203ENST00000505657 ZFPM1Q8IX07 1006 aa5.17□□□□□ -1.58
CHD1-203ENST00000505657 RHOT1Q8IXI2 618 aa5.17□□□□□ -1.58
CHD1-203ENST00000505657 ANKRD35Q8N283 1001 aa5.17□□□□□ -1.58
CHD1-203ENST00000505657 IL17DQ8TAD2 202 aa5.17□□□□□ -1.58
CHD1-203ENST00000505657 SH3RF3Q8TEJ3 882 aaPredicted RBP5.17□□□□□ -1.58
CHD1-203ENST00000505657 CEP89Q96ST8 783 aa5.17□□□□□ -1.58
CHD1-203ENST00000505657 MYOCQ99972 504 aa5.17□□□□□ -1.58
CHD1-203ENST00000505657 GPR87Q9BY21 358 aa5.17□□□□□ -1.58
CHD1-203ENST00000505657 RHOBTB2Q9BYZ6 727 aa5.17□□□□□ -1.58
CHD1-203ENST00000505657 SENP6Q9GZR1 1112 aaPredicted RBP5.17□□□□□ -1.58
CHD1-203ENST00000505657 GIT1Q9Y2X7 761 aa5.17□□□□□ -1.58
CHD1-203ENST00000505657 TESMINQ9Y4I5 508 aa5.17□□□□□ -1.58
CHD1-203ENST00000505657 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
CHD1-203ENST00000505657 AKAP10O43572 662 aa5.16□□□□□ -1.58
CHD1-203ENST00000505657 MFAP3LO75121 409 aa5.16□□□□□ -1.58
CHD1-203ENST00000505657 IPO13O94829 963 aaKnown RBP5.16□□□□□ -1.58
CHD1-203ENST00000505657 TACR2P21452 398 aa5.16□□□□□ -1.58
CHD1-203ENST00000505657 SLC16A1P53985 500 aa5.16□□□□□ -1.58
CHD1-203ENST00000505657 DGCR2P98153 550 aa5.16□□□□□ -1.58
CHD1-203ENST00000505657 ATP8B2P98198 1209 aa5.16□□□□□ -1.58
CHD1-203ENST00000505657 CRHR2Q13324 411 aa5.16□□□□□ -1.58
CHD1-203ENST00000505657 SP140Q13342 867 aa5.16□□□□□ -1.58
CHD1-203ENST00000505657 MTM1Q13496 603 aa5.16□□□□□ -1.58
CHD1-203ENST00000505657 PIN1Q13526 163 aaPredicted RBP5.16□□□□□ -1.58
CHD1-203ENST00000505657 FAM47AQ5JRC9 791 aa5.16□□□□□ -1.58
CHD1-203ENST00000505657 HTR3DQ70Z44 454 aa5.16□□□□□ -1.58
CHD1-203ENST00000505657 PDZD4Q76G19 769 aaPredicted RBP5.16□□□□□ -1.58
CHD1-203ENST00000505657 CATIPQ7Z7H3 387 aa5.16□□□□□ -1.58
CHD1-203ENST00000505657 FAM83AQ86UY5 434 aa5.16□□□□□ -1.58
CHD1-203ENST00000505657 SYT12Q8IV01 421 aa5.16□□□□□ -1.58
CHD1-203ENST00000505657 ANKRD13AQ8IZ07 590 aa5.16□□□□□ -1.58
CHD1-203ENST00000505657 CDK5RAP1Q96SZ6 601 aaKnown RBP5.16□□□□□ -1.58
CHD1-203ENST00000505657 MNTQ99583 582 aa5.16□□□□□ -1.58
CHD1-203ENST00000505657 C7orf25Q9BPX7 421 aa5.16□□□□□ -1.58
CHD1-203ENST00000505657 SLC23A1Q9UHI7 598 aa5.16□□□□□ -1.58
CHD1-203ENST00000505657 RUVBL1Q9Y265 456 aaKnown RBP5.16□□□□□ -1.58
CHD1-203ENST00000505657 PNPLA7Q6ZV29 1317 aa5.16□□□□□ -1.58
CHD1-203ENST00000505657 TBKBP1A7MCY6 615 aa5.15□□□□□ -1.59
CHD1-203ENST00000505657 GRXCR1A8MXD5 290 aa5.15□□□□□ -1.59
CHD1-203ENST00000505657 B5MCH6 92 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms