RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 CHST13Q8NET6 341 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 MAGOHBQ96A72 148 aaKnown RBP18.22■□□□□ 0.51
LIN54-204ENST00000505397 TMEM206Q9H813 350 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 UBE2TQ9NPD8 197 aaPredicted RBP18.22■□□□□ 0.51
LIN54-204ENST00000505397 SYNGAP1Q96PV0 1343 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 PMM2O15305 246 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 MTA2O94776 668 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 KRT13P13646 458 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 HSPA6P17066 643 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 CTNNA2P26232 953 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 COPB2P35606 906 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 QARSP47897 775 aaKnown RBP18.22■□□□□ 0.51
LIN54-204ENST00000505397 KRT71Q3SY84 523 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 FBXW10Q5XX13 1052 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 KCNV1Q6PIU1 500 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 PADI6Q6TGC4 694 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 GLG1Q92896 1179 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 RPS6KC1Q96S38 1066 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 BCCIPQ9P287 314 aaKnown RBP eCLIP18.22■□□□□ 0.51
LIN54-204ENST00000505397 ATP8A1Q9Y2Q0 1164 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 CAPN7Q9Y6W3 813 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 A0A0G2JMZ2 1700 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 GLTPD2A6NH11 291 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 WDR64B1ANS9 1081 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 MAPK13O15264 365 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 MAFGO15525 162 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 FTLP02792 175 aaPredicted RBP18.22■□□□□ 0.51
LIN54-204ENST00000505397 HNRNPH1P31943 449 aaKnown RBP18.22■□□□□ 0.51
LIN54-204ENST00000505397 SFNP31947 248 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 PEX5P50542 639 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 VAMP7P51809 220 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 CLMNQ96JQ2 1002 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 TRIM31Q9BZY9 425 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 SEPT11Q9NVA2 429 aaKnown RBP18.22■□□□□ 0.51
LIN54-204ENST00000505397 PCYOX1Q9UHG3 505 aa18.22■□□□□ 0.51
LIN54-204ENST00000505397 DDX20Q9UHI6 824 aaKnown RBP18.22■□□□□ 0.51
LIN54-204ENST00000505397 A0A0G2JLL6 359 aaPredicted RBP18.21■□□□□ 0.51
LIN54-204ENST00000505397 IQCA1LA6NCM1 817 aa18.21■□□□□ 0.51
LIN54-204ENST00000505397 SPDYE5A6NIY4 337 aa18.21■□□□□ 0.51
LIN54-204ENST00000505397 K7ENM7 598 aa18.21■□□□□ 0.51
LIN54-204ENST00000505397 PHF2O75151 1096 aa18.21■□□□□ 0.51
LIN54-204ENST00000505397 DRP2Q13474 957 aa18.21■□□□□ 0.51
LIN54-204ENST00000505397 LBX2Q6XYB7 198 aa18.21■□□□□ 0.51
LIN54-204ENST00000505397 PRRT2Q7Z6L0 340 aaPredicted RBP18.21■□□□□ 0.51
LIN54-204ENST00000505397 ANKRD35Q8N283 1001 aa18.21■□□□□ 0.51
LIN54-204ENST00000505397 RAPGEF5Q92565 580 aa18.21■□□□□ 0.51
LIN54-204ENST00000505397 ZSWIM1Q9BR11 485 aa18.21■□□□□ 0.51
LIN54-204ENST00000505397 PABPC3Q9H361 631 aaKnown RBP18.21■□□□□ 0.51
LIN54-204ENST00000505397 PCDHA3Q9Y5H8 950 aa18.21■□□□□ 0.51
LIN54-204ENST00000505397 CHRNA3P32297 505 aa18.21■□□□□ 0.5
LIN54-204ENST00000505397 GPC5P78333 572 aa18.21■□□□□ 0.5
LIN54-204ENST00000505397 GNPTABQ3T906 1256 aa18.21■□□□□ 0.5
LIN54-204ENST00000505397 ODF2Q5BJF6 829 aa18.21■□□□□ 0.5
LIN54-204ENST00000505397 ADAT2Q7Z6V5 191 aaKnown RBP18.21■□□□□ 0.5
LIN54-204ENST00000505397 PRELID2Q8N945 189 aa18.21■□□□□ 0.5
LIN54-204ENST00000505397 KRT35Q92764 455 aa18.21■□□□□ 0.5
LIN54-204ENST00000505397 CENPTQ96BT3 561 aa18.21■□□□□ 0.5
LIN54-204ENST00000505397 CDHR1Q96JP9 859 aa18.21■□□□□ 0.5
LIN54-204ENST00000505397 CNOT10Q9H9A5 744 aaKnown RBP18.21■□□□□ 0.5
LIN54-204ENST00000505397 GRHL1Q9NZI5 618 aa18.21■□□□□ 0.5
LIN54-204ENST00000505397 LARSQ9P2J5 1176 aaKnown RBP18.21■□□□□ 0.5
LIN54-204ENST00000505397 FBXO40Q9UH90 709 aa18.21■□□□□ 0.5
LIN54-204ENST00000505397 CXCL11O14625 94 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 ATP9AO75110 1047 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 RTN2O75298 545 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 STAM2O75886 525 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 AADACL2Q6P093 401 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 MOB2Q70IA6 237 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 ARMC9Q7Z3E5 817 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 ZDHHC14Q8IZN3 488 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 UBL4BQ8N7F7 174 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 CD101Q93033 1021 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 DBR1Q9UK59 544 aaKnown RBP18.2■□□□□ 0.5
LIN54-204ENST00000505397 TISP43B9A030 160 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 GGPS1O95749 300 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 PMS2P54278 862 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 ACTN3Q08043 901 aaPredicted RBP18.2■□□□□ 0.5
LIN54-204ENST00000505397 CETN1Q12798 172 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 PLCB4Q15147 1175 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 QPCTQ16769 361 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 RPUSD2Q8IZ73 545 aaKnown RBP18.2■□□□□ 0.5
LIN54-204ENST00000505397 PLEKHO2Q8TD55 490 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 MORC4Q8TE76 937 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 ACCSQ96QU6 501 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 PCDHB18PQ96TA0 734 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 ST6GALNAC4Q9H4F1 302 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 PCIF1Q9H4Z3 704 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 CTTNBP2NLQ9P2B4 639 aa18.2■□□□□ 0.5
LIN54-204ENST00000505397 NOCTQ9UK39 431 aaKnown RBP18.2■□□□□ 0.5
LIN54-204ENST00000505397 GZMAP12544 262 aa18.19■□□□□ 0.5
LIN54-204ENST00000505397 CHRNB2P17787 502 aa18.19■□□□□ 0.5
LIN54-204ENST00000505397 IFT88Q13099 833 aa18.19■□□□□ 0.5
LIN54-204ENST00000505397 BYSLQ13895 437 aaKnown RBP18.19■□□□□ 0.5
LIN54-204ENST00000505397 C18orf8Q96DM3 657 aa18.19■□□□□ 0.5
LIN54-204ENST00000505397 PGM2Q96G03 612 aa18.19■□□□□ 0.5
LIN54-204ENST00000505397 CBWD1Q9BRT8 395 aa18.19■□□□□ 0.5
LIN54-204ENST00000505397 RASAL2Q9UJF2 1139 aa18.19■□□□□ 0.5
LIN54-204ENST00000505397 LCTP09848 1927 aa18.19■□□□□ 0.5
LIN54-204ENST00000505397 CAND2O75155 1236 aa18.19■□□□□ 0.5
LIN54-204ENST00000505397 MARCKSL1P49006 195 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms