RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 PRR23BQ6ZRT6 265 aa12.89□□□□□ -0.35
CCHCR1-219ENST00000505392 FERMT3Q86UX7 667 aa12.89□□□□□ -0.35
CCHCR1-219ENST00000505392 CCDC148Q8NFR7 591 aa12.89□□□□□ -0.35
CCHCR1-219ENST00000505392 LNX1Q8TBB1 728 aaPredicted RBP12.89□□□□□ -0.35
CCHCR1-219ENST00000505392 TCP11Q8WWU5 503 aa12.89□□□□□ -0.35
CCHCR1-219ENST00000505392 MCRS1Q96EZ8 462 aa12.89□□□□□ -0.35
CCHCR1-219ENST00000505392 SLKQ9H2G2 1235 aaPredicted RBP12.89□□□□□ -0.35
CCHCR1-219ENST00000505392 HCFC1R1Q9NWW0 138 aa12.89□□□□□ -0.35
CCHCR1-219ENST00000505392 KLK14Q9P0G3 267 aa12.89□□□□□ -0.35
CCHCR1-219ENST00000505392 VPS54Q9P1Q0 977 aa12.89□□□□□ -0.35
CCHCR1-219ENST00000505392 CACNG4Q9UBN1 327 aa12.89□□□□□ -0.35
CCHCR1-219ENST00000505392 PARP2Q9UGN5 583 aa12.89□□□□□ -0.35
CCHCR1-219ENST00000505392 CYP3A7-CYP3A51PA0A087WV96 503 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 SHISA7A6NL88 538 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 INO80B-WBP1J3KQ70 363 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 DKC1O60832 514 aaKnown RBP eCLIP12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 RETP07949 1114 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 KCNA4P22459 653 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 CYP3A7P24462 503 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 HOXA9P31269 272 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 RFC5P40937 340 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 NLRP5P59047 1200 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 PTENP60484 403 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 HSP90AA2PQ14568 343 aaPredicted RBP12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 PPP2R5DQ14738 602 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 PCBP1Q15365 356 aaKnown RBP eCLIP12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 UVSSAQ2YD98 709 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 PABPC1LQ4VXU2 614 aaKnown RBP12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 AXDND1Q5T1B0 1012 aaPredicted RBP12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 FAM171A1Q5VUB5 890 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 LAIR1Q6GTX8 287 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 NPAS3Q8IXF0 933 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 HACE1Q8IYU2 909 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 ETNPPLQ8TBG4 499 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 HASPINQ8TF76 798 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 ING5Q8WYH8 240 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 CCDC51Q96ER9 411 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 PAAF1Q9BRP4 392 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 TTPALQ9BTX7 342 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 NXF3Q9H4D5 531 aaKnown RBP12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 SEMA4GQ9NTN9 838 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 KCNH3Q9ULD8 1083 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 NDRG2Q9UN36 371 aaKnown RBP12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 MRPS23Q9Y3D9 190 aaKnown RBP12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 PPME1Q9Y570 386 aa12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 SF3B1O75533 1304 aaKnown RBP eCLIP12.88□□□□□ -0.35
CCHCR1-219ENST00000505392 ADAM12O43184 909 aa12.87□□□□□ -0.35
CCHCR1-219ENST00000505392 GDF9O60383 454 aa12.87□□□□□ -0.35
CCHCR1-219ENST00000505392 ECI2O75521 394 aa12.87□□□□□ -0.35
CCHCR1-219ENST00000505392 P4HBP07237 508 aaKnown RBP12.87□□□□□ -0.35
CCHCR1-219ENST00000505392 TDGF1P13385 188 aa12.87□□□□□ -0.35
CCHCR1-219ENST00000505392 GRIK3Q13003 919 aa12.87□□□□□ -0.35
CCHCR1-219ENST00000505392 PSMD5Q16401 504 aa12.87□□□□□ -0.35
CCHCR1-219ENST00000505392 TSGA10IPQ3SY00 556 aa12.87□□□□□ -0.35
CCHCR1-219ENST00000505392 TANGO2Q6ICL3 276 aa12.87□□□□□ -0.35
CCHCR1-219ENST00000505392 OTUD6AQ7L8S5 288 aa12.87□□□□□ -0.35
CCHCR1-219ENST00000505392 CDR2LQ86X02 465 aaPredicted RBP12.87□□□□□ -0.35
CCHCR1-219ENST00000505392 SLC7A14Q8TBB6 771 aa12.87□□□□□ -0.35
CCHCR1-219ENST00000505392 PIK3R5Q8WYR1 880 aa12.87□□□□□ -0.35
CCHCR1-219ENST00000505392 SLC26A6Q9BXS9 759 aa12.87□□□□□ -0.35
CCHCR1-219ENST00000505392 C22orf23Q9BZE7 217 aa12.87□□□□□ -0.35
CCHCR1-219ENST00000505392 LMAN1LQ9HAT1 526 aa12.87□□□□□ -0.35
CCHCR1-219ENST00000505392 WRAP73Q9P2S5 460 aaPredicted RBP12.87□□□□□ -0.35
CCHCR1-219ENST00000505392 DOCK6Q96HP0 2047 aa12.87□□□□□ -0.35
CCHCR1-219ENST00000505392 MAP1BP46821 2468 aaKnown RBP12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 CASTOR2A6NHX0 329 aa12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 MAN2B1O00754 1011 aa12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 ZBTB39O15060 712 aa12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 LRP3O75074 770 aa12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 CPA1P15085 419 aa12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 ARF4P18085 180 aaPredicted RBP12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 YWHABP31946 246 aaKnown RBP12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 SIM2Q14190 667 aaPredicted RBP12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 MXD4Q14582 209 aaPredicted RBP12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 EMC2Q15006 297 aa12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 NTRK3Q16288 839 aa12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 XKR9Q5GH70 373 aa12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 POTEHQ6S545 545 aa12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 MAMSTRQ6ZN01 415 aa12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 PRR23CQ6ZRP0 262 aa12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 Q6ZUG5 572 aa12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 BRF1Q92994 677 aa12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 MTRQ99707 1265 aa12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 RNF26Q9BY78 433 aaPredicted RBP12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 CHRDQ9H2X0 955 aa12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 GDE1Q9NZC3 331 aa12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 DDX25Q9UHL0 483 aaKnown RBP12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 MTCL1Q9Y4B5 1905 aaKnown RBP12.86□□□□□ -0.35
CCHCR1-219ENST00000505392 HRO43593 1189 aa12.85□□□□□ -0.35
CCHCR1-219ENST00000505392 NPTXRO95502 500 aa12.85□□□□□ -0.35
CCHCR1-219ENST00000505392 HMGB1P09429 215 aaKnown RBP12.85□□□□□ -0.35
CCHCR1-219ENST00000505392 OR1D2P34982 312 aa12.85□□□□□ -0.35
CCHCR1-219ENST00000505392 DMWDQ09019 674 aa12.85□□□□□ -0.35
CCHCR1-219ENST00000505392 PPP2R5CQ13362 524 aa12.85□□□□□ -0.35
CCHCR1-219ENST00000505392 TUSC3Q13454 348 aa12.85□□□□□ -0.35
CCHCR1-219ENST00000505392 RAB33AQ14088 237 aa12.85□□□□□ -0.35
CCHCR1-219ENST00000505392 CSRP2Q16527 193 aa12.85□□□□□ -0.35
CCHCR1-219ENST00000505392 AMHR2Q16671 573 aa12.85□□□□□ -0.35
CCHCR1-219ENST00000505392 C4orf19Q8IY42 314 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms