RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 VTA1Q9NP79 307 aa14.27□□□□□ -0.12
CCSER1-205ENST00000505073 HNRNPDLO14979 420 aaKnown RBP14.27□□□□□ -0.13
CCSER1-205ENST00000505073 MEFVO15553 781 aaPredicted RBP14.27□□□□□ -0.13
CCSER1-205ENST00000505073 MAFO75444 373 aaPredicted RBP14.27□□□□□ -0.13
CCSER1-205ENST00000505073 SNRPFP62306 86 aaKnown RBP14.27□□□□□ -0.13
CCSER1-205ENST00000505073 TAF1CQ15572 869 aaPredicted RBP14.27□□□□□ -0.13
CCSER1-205ENST00000505073 TDRD12Q587J7 1177 aaKnown RBP14.27□□□□□ -0.13
CCSER1-205ENST00000505073 CCDC181Q5TID7 509 aa14.27□□□□□ -0.13
CCSER1-205ENST00000505073 INTS8Q75QN2 995 aaKnown RBP14.27□□□□□ -0.13
CCSER1-205ENST00000505073 PLPPR4Q7Z2D5 763 aa14.27□□□□□ -0.13
CCSER1-205ENST00000505073 LRRC71Q8N4P6 559 aa14.27□□□□□ -0.13
CCSER1-205ENST00000505073 DEPTORQ8TB45 409 aa14.27□□□□□ -0.13
CCSER1-205ENST00000505073 ATP8B4Q8TF62 1192 aa14.27□□□□□ -0.13
CCSER1-205ENST00000505073 POMGNT1Q8WZA1 660 aa14.27□□□□□ -0.13
CCSER1-205ENST00000505073 ZBTB10Q96DT7 871 aa14.27□□□□□ -0.13
CCSER1-205ENST00000505073 ZIM3Q96PE6 472 aa14.27□□□□□ -0.13
CCSER1-205ENST00000505073 IFIH1Q9BYX4 1025 aaKnown RBP14.27□□□□□ -0.13
CCSER1-205ENST00000505073 EMSYQ7Z589 1322 aa14.26□□□□□ -0.13
CCSER1-205ENST00000505073 GTPBP10A4D1E9 387 aaKnown RBP14.26□□□□□ -0.13
CCSER1-205ENST00000505073 ZBTB42B2RXF5 422 aa14.26□□□□□ -0.13
CCSER1-205ENST00000505073 MAPK4P31152 587 aa14.26□□□□□ -0.13
CCSER1-205ENST00000505073 MATR3P43243 847 aaKnown RBP eCLIP14.26□□□□□ -0.13
CCSER1-205ENST00000505073 KIF11P52732 1056 aa14.26□□□□□ -0.13
CCSER1-205ENST00000505073 MYL7Q01449 175 aa14.26□□□□□ -0.13
CCSER1-205ENST00000505073 PPP3CAQ08209 521 aa14.26□□□□□ -0.13
CCSER1-205ENST00000505073 C1orf220Q5T0J3 134 aa14.26□□□□□ -0.13
CCSER1-205ENST00000505073 RGMBQ6NW40 437 aa14.26□□□□□ -0.13
CCSER1-205ENST00000505073 TMEM174Q8WUU8 243 aa14.26□□□□□ -0.13
CCSER1-205ENST00000505073 TRPC6Q9Y210 931 aa14.26□□□□□ -0.13
CCSER1-205ENST00000505073 MOCS3O95396 460 aa14.26□□□□□ -0.13
CCSER1-205ENST00000505073 NAMPTP43490 491 aa14.26□□□□□ -0.13
CCSER1-205ENST00000505073 GCLMP48507 274 aa14.26□□□□□ -0.13
CCSER1-205ENST00000505073 MRPS25P82663 173 aaKnown RBP14.26□□□□□ -0.13
CCSER1-205ENST00000505073 CAPSQ13938 189 aa14.26□□□□□ -0.13
CCSER1-205ENST00000505073 SNRNP35Q16560 246 aaKnown RBP14.26□□□□□ -0.13
CCSER1-205ENST00000505073 C8orf74Q6P047 294 aa14.26□□□□□ -0.13
CCSER1-205ENST00000505073 NFRKBQ6P4R8 1299 aa14.26□□□□□ -0.13
CCSER1-205ENST00000505073 KDM7AQ6ZMT4 941 aa14.26□□□□□ -0.13
CCSER1-205ENST00000505073 MICALCLQ6ZW33 695 aa14.26□□□□□ -0.13
CCSER1-205ENST00000505073 ZNF467Q7Z7K2 595 aaPredicted RBP14.26□□□□□ -0.13
CCSER1-205ENST00000505073 ALS2CR12Q96Q35 445 aa14.26□□□□□ -0.13
CCSER1-205ENST00000505073 SPAG5Q96R06 1193 aa14.26□□□□□ -0.13
CCSER1-205ENST00000505073 SMARCAD1Q9H4L7 1026 aa14.26□□□□□ -0.13
CCSER1-205ENST00000505073 PCDHA13Q9Y5I0 950 aa14.26□□□□□ -0.13
CCSER1-205ENST00000505073 MANSC4A6NHS7 340 aaPredicted RBP14.25□□□□□ -0.13
CCSER1-205ENST00000505073 H0YHG0 523 aa14.25□□□□□ -0.13
CCSER1-205ENST00000505073 AKR1B10O60218 316 aa14.25□□□□□ -0.13
CCSER1-205ENST00000505073 LRRN2O75325 713 aa14.25□□□□□ -0.13
CCSER1-205ENST00000505073 GH1P01241 217 aa14.25□□□□□ -0.13
CCSER1-205ENST00000505073 MKRN4PQ13434 485 aaPredicted RBP14.25□□□□□ -0.13
CCSER1-205ENST00000505073 SH2D3CQ8N5H7 860 aa14.25□□□□□ -0.13
CCSER1-205ENST00000505073 AFG1LQ8WV93 481 aa14.25□□□□□ -0.13
CCSER1-205ENST00000505073 PRPF31Q8WWY3 499 aaKnown RBP14.25□□□□□ -0.13
CCSER1-205ENST00000505073 INTS2Q9H0H0 1204 aaKnown RBP14.25□□□□□ -0.13
CCSER1-205ENST00000505073 NUCKS1Q9H1E3 243 aaKnown RBP14.25□□□□□ -0.13
CCSER1-205ENST00000505073 ADGRA2Q96PE1 1338 aa14.25□□□□□ -0.13
CCSER1-205ENST00000505073 CLSTN1O94985 981 aa14.25□□□□□ -0.13
CCSER1-205ENST00000505073 EDN1P05305 212 aa14.25□□□□□ -0.13
CCSER1-205ENST00000505073 LIG4P49917 911 aa14.25□□□□□ -0.13
CCSER1-205ENST00000505073 ATP1A2P50993 1020 aa14.25□□□□□ -0.13
CCSER1-205ENST00000505073 STRN3Q13033 797 aa14.25□□□□□ -0.13
CCSER1-205ENST00000505073 LAMC2Q13753 1193 aa14.25□□□□□ -0.13
CCSER1-205ENST00000505073 ASIC2Q16515 512 aa14.25□□□□□ -0.13
CCSER1-205ENST00000505073 SLC9C1Q4G0N8 1177 aa14.25□□□□□ -0.13
CCSER1-205ENST00000505073 YTHDF3Q7Z739 585 aaKnown RBP14.25□□□□□ -0.13
CCSER1-205ENST00000505073 SYN2Q92777 582 aaPredicted RBP14.25□□□□□ -0.13
CCSER1-205ENST00000505073 CCDC127Q96BQ5 260 aa14.25□□□□□ -0.13
CCSER1-205ENST00000505073 TINF2Q9BSI4 451 aa14.25□□□□□ -0.13
CCSER1-205ENST00000505073 EPN3Q9H201 632 aa14.25□□□□□ -0.13
CCSER1-205ENST00000505073 RNPEPQ9H4A4 650 aa14.25□□□□□ -0.13
CCSER1-205ENST00000505073 RBM47A0AV96 593 aaKnown RBP14.24□□□□□ -0.13
CCSER1-205ENST00000505073 H0YCG3 227 aa14.24□□□□□ -0.13
CCSER1-205ENST00000505073 K7ERI5 159 aa14.24□□□□□ -0.13
CCSER1-205ENST00000505073 MYO1FO00160 1098 aa14.24□□□□□ -0.13
CCSER1-205ENST00000505073 SERPING1P05155 500 aa14.24□□□□□ -0.13
CCSER1-205ENST00000505073 LSP1P33241 339 aa14.24□□□□□ -0.13
CCSER1-205ENST00000505073 PAFAH1B1P43034 410 aa14.24□□□□□ -0.13
CCSER1-205ENST00000505073 NAP1L1P55209 391 aaKnown RBP14.24□□□□□ -0.13
CCSER1-205ENST00000505073 GFPT1Q06210 699 aaPredicted RBP14.24□□□□□ -0.13
CCSER1-205ENST00000505073 GLE1Q53GS7 698 aaKnown RBP14.24□□□□□ -0.13
CCSER1-205ENST00000505073 BRDTQ58F21 947 aaPredicted RBP14.24□□□□□ -0.13
CCSER1-205ENST00000505073 ZNF668Q96K58 619 aaPredicted RBP14.24□□□□□ -0.13
CCSER1-205ENST00000505073 ZBTB45Q96K62 511 aaPredicted RBP14.24□□□□□ -0.13
CCSER1-205ENST00000505073 POP1Q99575 1024 aaKnown RBP14.24□□□□□ -0.13
CCSER1-205ENST00000505073 SMARCAL1Q9NZC9 954 aa14.24□□□□□ -0.13
CCSER1-205ENST00000505073 DCAF8L1A6NGE4 600 aa14.24□□□□□ -0.13
CCSER1-205ENST00000505073 SLC15A5A6NIM6 579 aa14.24□□□□□ -0.13
CCSER1-205ENST00000505073 LGALS2P05162 132 aa14.24□□□□□ -0.13
CCSER1-205ENST00000505073 ZNF286BP0CG31 522 aa14.24□□□□□ -0.13
CCSER1-205ENST00000505073 IGBP1P78318 339 aa14.24□□□□□ -0.13
CCSER1-205ENST00000505073 ASTE1Q2TB18 679 aaPredicted RBP14.24□□□□□ -0.13
CCSER1-205ENST00000505073 NAA35Q5VZE5 725 aa14.24□□□□□ -0.13
CCSER1-205ENST00000505073 KCTD16Q68DU8 428 aa14.24□□□□□ -0.13
CCSER1-205ENST00000505073 FAM213AQ9BRX8 229 aa14.24□□□□□ -0.13
CCSER1-205ENST00000505073 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.24□□□□□ -0.13
CCSER1-205ENST00000505073 TOPORSQ9NS56 1045 aaPredicted RBP14.24□□□□□ -0.13
CCSER1-205ENST00000505073 EHD2Q9NZN4 543 aa14.24□□□□□ -0.13
CCSER1-205ENST00000505073 AIPL1Q9NZN9 384 aa14.24□□□□□ -0.13
CCSER1-205ENST00000505073 MAPK13O15264 365 aa14.23□□□□□ -0.13
CCSER1-205ENST00000505073 LCA5LO95447 670 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms