RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 NBPF20Q3BBV1 942 aa11.01□□□□□ -0.65
DDX41-203ENST00000504781 KRT39Q6A163 491 aa11.01□□□□□ -0.65
DDX41-203ENST00000504781 DPY19L2P1Q6NXN4 242 aa11.01□□□□□ -0.65
DDX41-203ENST00000504781 CRELD2Q6UXH1 353 aaPredicted RBP11.01□□□□□ -0.65
DDX41-203ENST00000504781 RSPH3Q86UC2 560 aa11.01□□□□□ -0.65
DDX41-203ENST00000504781 CBWD2Q8IUF1 395 aa11.01□□□□□ -0.65
DDX41-203ENST00000504781 CCDC170Q8IYT3 715 aa11.01□□□□□ -0.65
DDX41-203ENST00000504781 C7orf61Q8IZ16 206 aa11.01□□□□□ -0.65
DDX41-203ENST00000504781 CCDC155Q8N6L0 562 aa11.01□□□□□ -0.65
DDX41-203ENST00000504781 NLRP7Q8WX94 980 aa11.01□□□□□ -0.65
DDX41-203ENST00000504781 FNBP1Q96RU3 617 aa11.01□□□□□ -0.65
DDX41-203ENST00000504781 TMEM8AQ9HCN3 771 aa11.01□□□□□ -0.65
DDX41-203ENST00000504781 FAM207AQ9NSI2 230 aaPredicted RBP11.01□□□□□ -0.65
DDX41-203ENST00000504781 AIPL1Q9NZN9 384 aa11.01□□□□□ -0.65
DDX41-203ENST00000504781 GTF2IRD1Q9UHL9 959 aa11.01□□□□□ -0.65
DDX41-203ENST00000504781 BZW2Q9Y6E2 419 aaKnown RBP11.01□□□□□ -0.65
DDX41-203ENST00000504781 CEP290O15078 2479 aa11.01□□□□□ -0.65
DDX41-203ENST00000504781 SIP14410 1827 aa11□□□□□ -0.65
DDX41-203ENST00000504781 ABLIM1O14639 778 aa11□□□□□ -0.65
DDX41-203ENST00000504781 TREHO43280 583 aa11□□□□□ -0.65
DDX41-203ENST00000504781 ZSCAN12O43309 604 aa11□□□□□ -0.65
DDX41-203ENST00000504781 ZC3H11AO75152 810 aaKnown RBP eCLIP11□□□□□ -0.65
DDX41-203ENST00000504781 MCF2P10911 925 aa11□□□□□ -0.65
DDX41-203ENST00000504781 UCHL3P15374 230 aa11□□□□□ -0.65
DDX41-203ENST00000504781 EIF4BP23588 611 aaKnown RBP11□□□□□ -0.65
DDX41-203ENST00000504781 KLK7P49862 253 aa11□□□□□ -0.65
DDX41-203ENST00000504781 CHMP4BP1P59074 171 aa11□□□□□ -0.65
DDX41-203ENST00000504781 DLG4P78352 724 aa11□□□□□ -0.65
DDX41-203ENST00000504781 IRX5P78411 483 aaPredicted RBP11□□□□□ -0.65
DDX41-203ENST00000504781 AMHR2Q16671 573 aa11□□□□□ -0.65
DDX41-203ENST00000504781 C1orf220Q5T0J3 134 aa11□□□□□ -0.65
DDX41-203ENST00000504781 LHX8Q68G74 356 aa11□□□□□ -0.65
DDX41-203ENST00000504781 CXCL17Q6UXB2 119 aa11□□□□□ -0.65
DDX41-203ENST00000504781 ANKLE1Q8NAG6 615 aa11□□□□□ -0.65
DDX41-203ENST00000504781 LMO3Q8TAP4 145 aa11□□□□□ -0.65
DDX41-203ENST00000504781 DNAJB3Q8WWF6 145 aa11□□□□□ -0.65
DDX41-203ENST00000504781 BAP1Q92560 729 aa11□□□□□ -0.65
DDX41-203ENST00000504781 LENG1Q96BZ8 264 aaPredicted RBP11□□□□□ -0.65
DDX41-203ENST00000504781 SAAL1Q96ER3 474 aa11□□□□□ -0.65
DDX41-203ENST00000504781 CRACR2AQ9BSW2 395 aa11□□□□□ -0.65
DDX41-203ENST00000504781 LSM14BQ9BX40 385 aaKnown RBP11□□□□□ -0.65
DDX41-203ENST00000504781 HAPLN2Q9GZV7 340 aa11□□□□□ -0.65
DDX41-203ENST00000504781 C11orf49Q9H6J7 331 aa11□□□□□ -0.65
DDX41-203ENST00000504781 MINDY3Q9H8M7 445 aa11□□□□□ -0.65
DDX41-203ENST00000504781 SPTLC3Q9NUV7 552 aa11□□□□□ -0.65
DDX41-203ENST00000504781 ZMYND8Q9ULU4 1186 aaPredicted RBP11□□□□□ -0.65
DDX41-203ENST00000504781 PYCARDQ9ULZ3 195 aa11□□□□□ -0.65
DDX41-203ENST00000504781 MYADML2A6NDP7 307 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 ERLIN2O94905 339 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 IL18RAPO95256 599 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 C4BPAP04003 597 aaKnown RBP10.99□□□□□ -0.65
DDX41-203ENST00000504781 ADRB2P07550 413 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 CLTAP09496 248 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 IQCF3P0C7M6 154 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 CCDC172P0C7W6 258 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 DARSP14868 501 aaKnown RBP10.99□□□□□ -0.65
DDX41-203ENST00000504781 ACOT2P49753 483 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 POLR2FP61218 127 aaKnown RBP10.99□□□□□ -0.65
DDX41-203ENST00000504781 MYL7Q01449 175 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 PPP3CAQ08209 521 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 HIC1Q14526 733 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 TMEM132AQ24JP5 1023 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 CBWD6Q4V339 395 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 EPC2Q52LR7 807 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 CBWD3Q5JTY5 395 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 CBWD5Q5RIA9 395 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 SFMBT2Q5VUG0 894 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 TRIM65Q6PJ69 517 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 WDR59Q6PJI9 974 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 C15orf39Q6ZRI6 1047 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 FAM43BQ6ZT52 329 aaPredicted RBP10.99□□□□□ -0.65
DDX41-203ENST00000504781 SV2AQ7L0J3 742 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 RRAGAQ7L523 313 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 CD302Q8IX05 232 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 ZSWIM2Q8NEG5 633 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 PLEKHO2Q8TD55 490 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 CCDC127Q96BQ5 260 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 ZBTB10Q96DT7 871 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 TSPAN18Q96SJ8 248 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 ADPGKQ9BRR6 497 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 STK33Q9BYT3 514 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 CELF4Q9BZC1 486 aaKnown RBP10.99□□□□□ -0.65
DDX41-203ENST00000504781 TMEM117Q9H0C3 514 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 GANQ9H2C0 597 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 RAB20Q9NX57 234 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 CPSF3Q9UKF6 684 aaKnown RBP10.99□□□□□ -0.65
DDX41-203ENST00000504781 OGDHLQ9ULD0 1010 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 CNTNAP2Q9UHC6 1331 aa10.99□□□□□ -0.65
DDX41-203ENST00000504781 SSU72P8A0A1W2PR75 194 aa10.98□□□□□ -0.65
DDX41-203ENST00000504781 GOLGA6L9A6NEM1 432 aa10.98□□□□□ -0.65
DDX41-203ENST00000504781 TTLL13PA6NNM8 815 aa10.98□□□□□ -0.65
DDX41-203ENST00000504781 LRRIQ3A6PVS8 624 aaPredicted RBP10.98□□□□□ -0.65
DDX41-203ENST00000504781 M0QZ92 97 aa10.98□□□□□ -0.65
DDX41-203ENST00000504781 FAM189A1O60320 539 aa10.98□□□□□ -0.65
DDX41-203ENST00000504781 B4GALT4O60513 344 aa10.98□□□□□ -0.65
DDX41-203ENST00000504781 EDN1P05305 212 aa10.98□□□□□ -0.65
DDX41-203ENST00000504781 TRIM49P0CI25 452 aa10.98□□□□□ -0.65
DDX41-203ENST00000504781 TRIM49CP0CI26 452 aa10.98□□□□□ -0.65
DDX41-203ENST00000504781 SYN1P17600 705 aa10.98□□□□□ -0.65
DDX41-203ENST00000504781 ARF4P18085 180 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms