RNA–Protein interactions for RNA: ENST00000504627.1

SQSTM1-209, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-209ENST00000504627 C2CD2LO14523 706 aa19.82■□□□□ 0.76
SQSTM1-209ENST00000504627 N4BP3O15049 544 aa19.82■□□□□ 0.76
SQSTM1-209ENST00000504627 TRAK2O60296 914 aa19.82■□□□□ 0.76
SQSTM1-209ENST00000504627 SOD2P04179 222 aa19.82■□□□□ 0.76
SQSTM1-209ENST00000504627 PRKCBP05771 671 aa19.82■□□□□ 0.76
SQSTM1-209ENST00000504627 URODP06132 367 aa19.82■□□□□ 0.76
SQSTM1-209ENST00000504627 EPCAMP16422 314 aa19.82■□□□□ 0.76
SQSTM1-209ENST00000504627 SP100P23497 879 aaPredicted RBP19.82■□□□□ 0.76
SQSTM1-209ENST00000504627 FAM187BQ17R55 369 aa19.82■□□□□ 0.76
SQSTM1-209ENST00000504627 RARS2Q5T160 578 aaKnown RBP19.82■□□□□ 0.76
SQSTM1-209ENST00000504627 CABP7Q86V35 215 aa19.82■□□□□ 0.76
SQSTM1-209ENST00000504627 GPT2Q8TD30 523 aa19.82■□□□□ 0.76
SQSTM1-209ENST00000504627 KIFAP3Q92845 792 aa19.82■□□□□ 0.76
SQSTM1-209ENST00000504627 NECTIN4Q96NY8 510 aa19.82■□□□□ 0.76
SQSTM1-209ENST00000504627 ADPGKQ9BRR6 497 aa19.82■□□□□ 0.76
SQSTM1-209ENST00000504627 COLEC11Q9BWP8 271 aa19.82■□□□□ 0.76
SQSTM1-209ENST00000504627 POLD4Q9HCU8 107 aa19.82■□□□□ 0.76
SQSTM1-209ENST00000504627 KLK14Q9P0G3 267 aa19.82■□□□□ 0.76
SQSTM1-209ENST00000504627 DNM3Q9UQ16 869 aa19.82■□□□□ 0.76
SQSTM1-209ENST00000504627 SSX2IPQ9Y2D8 614 aa19.82■□□□□ 0.76
SQSTM1-209ENST00000504627 DSC1Q08554 894 aa19.81■□□□□ 0.76
SQSTM1-209ENST00000504627 KIAA1841Q6NSI8 718 aa19.81■□□□□ 0.76
SQSTM1-209ENST00000504627 C12orf76Q8N812 135 aaPredicted RBP19.81■□□□□ 0.76
SQSTM1-209ENST00000504627 EDAQ92838 391 aa19.81■□□□□ 0.76
SQSTM1-209ENST00000504627 FAM122AQ96E09 287 aa19.81■□□□□ 0.76
SQSTM1-209ENST00000504627 RIPOR3Q96MK2 946 aa19.81■□□□□ 0.76
SQSTM1-209ENST00000504627 KLHL5Q96PQ7 755 aa19.81■□□□□ 0.76
SQSTM1-209ENST00000504627 MARCH5Q9NX47 278 aa19.81■□□□□ 0.76
SQSTM1-209ENST00000504627 NR2E1Q9Y466 385 aa19.81■□□□□ 0.76
SQSTM1-209ENST00000504627 E9PMD0 336 aa19.8■□□□□ 0.76
SQSTM1-209ENST00000504627 ACKR2O00590 384 aa19.8■□□□□ 0.76
SQSTM1-209ENST00000504627 CNPP09543 421 aaKnown RBP19.8■□□□□ 0.76
SQSTM1-209ENST00000504627 MTHFRP42898 656 aa19.8■□□□□ 0.76
SQSTM1-209ENST00000504627 EFNA5P52803 228 aa19.8■□□□□ 0.76
SQSTM1-209ENST00000504627 GRIK3Q13003 919 aa19.8■□□□□ 0.76
SQSTM1-209ENST00000504627 ZRSR1Q15695 479 aaKnown RBP19.8■□□□□ 0.76
SQSTM1-209ENST00000504627 ATAT1Q5SQI0 421 aa19.8■□□□□ 0.76
SQSTM1-209ENST00000504627 CCDC73Q6ZRK6 1079 aa19.8■□□□□ 0.76
SQSTM1-209ENST00000504627 ZBTB33Q86T24 672 aa19.8■□□□□ 0.76
SQSTM1-209ENST00000504627 SLC22A17Q8WUG5 538 aa19.8■□□□□ 0.76
SQSTM1-209ENST00000504627 KIFC3Q9BVG8 833 aa19.8■□□□□ 0.76
SQSTM1-209ENST00000504627 HERC2P3Q9BVR0 1158 aa19.8■□□□□ 0.76
SQSTM1-209ENST00000504627 PDZD7Q9H5P4 517 aa19.8■□□□□ 0.76
SQSTM1-209ENST00000504627 CDH22Q9UJ99 828 aa19.8■□□□□ 0.76
SQSTM1-209ENST00000504627 TTLL13PA6NNM8 815 aa19.79■□□□□ 0.76
SQSTM1-209ENST00000504627 PP2D1A8MPX8 630 aa19.79■□□□□ 0.76
SQSTM1-209ENST00000504627 WEE2P0C1S8 567 aa19.79■□□□□ 0.76
SQSTM1-209ENST00000504627 CMA1P23946 247 aa19.79■□□□□ 0.76
SQSTM1-209ENST00000504627 CDC25AP30304 524 aa19.79■□□□□ 0.76
SQSTM1-209ENST00000504627 GLUD2P49448 558 aa19.79■□□□□ 0.76
SQSTM1-209ENST00000504627 TAS1R1Q7RTX1 841 aa19.79■□□□□ 0.76
SQSTM1-209ENST00000504627 FSIP1Q8NA03 581 aa19.79■□□□□ 0.76
SQSTM1-209ENST00000504627 FBXL18Q96ME1 805 aa19.79■□□□□ 0.76
SQSTM1-209ENST00000504627 POMKQ9H5K3 350 aa19.79■□□□□ 0.76
SQSTM1-209ENST00000504627 SNTG2Q9NY99 539 aa19.79■□□□□ 0.76
SQSTM1-209ENST00000504627 USP20Q9Y2K6 914 aa19.79■□□□□ 0.76
SQSTM1-209ENST00000504627 FAM237AA0A1B0GTK4 181 aa19.78■□□□□ 0.76
SQSTM1-209ENST00000504627 CCDC169A6NNP5 214 aa19.78■□□□□ 0.76
SQSTM1-209ENST00000504627 K7ERI5 159 aa19.78■□□□□ 0.76
SQSTM1-209ENST00000504627 ADH1AP07327 375 aa19.78■□□□□ 0.76
SQSTM1-209ENST00000504627 LONP1P36776 959 aaKnown RBP19.78■□□□□ 0.76
SQSTM1-209ENST00000504627 CLCN4P51793 760 aa19.78■□□□□ 0.76
SQSTM1-209ENST00000504627 IL17AQ16552 155 aa19.78■□□□□ 0.76
SQSTM1-209ENST00000504627 RESP18Q5W5W9 173 aa19.78■□□□□ 0.76
SQSTM1-209ENST00000504627 KANK3Q6NY19 840 aa19.78■□□□□ 0.76
SQSTM1-209ENST00000504627 TMC5Q6UXY8 1006 aa19.78■□□□□ 0.76
SQSTM1-209ENST00000504627 GSTCDQ8NEC7 633 aa19.78■□□□□ 0.76
SQSTM1-209ENST00000504627 SYAP1Q96A49 352 aaPredicted RBP19.78■□□□□ 0.76
SQSTM1-209ENST00000504627 CCDC113Q9H0I3 377 aa19.78■□□□□ 0.76
SQSTM1-209ENST00000504627 SFXN1Q9H9B4 322 aa19.78■□□□□ 0.76
SQSTM1-209ENST00000504627 ARIH1Q9Y4X5 557 aaPredicted RBP19.78■□□□□ 0.76
SQSTM1-209ENST00000504627 ZMYM2Q9UBW7 1377 aa19.78■□□□□ 0.76
SQSTM1-209ENST00000504627 F8W810 466 aa19.77■□□□□ 0.76
SQSTM1-209ENST00000504627 LILRB3O75022 631 aa19.77■□□□□ 0.76
SQSTM1-209ENST00000504627 TADA2AO75478 443 aa19.77■□□□□ 0.76
SQSTM1-209ENST00000504627 PLA2G5P39877 138 aa19.77■□□□□ 0.76
SQSTM1-209ENST00000504627 ZXDAP98168 799 aa19.77■□□□□ 0.76
SQSTM1-209ENST00000504627 FUT10Q6P4F1 479 aa19.77■□□□□ 0.76
SQSTM1-209ENST00000504627 ELMSAN1Q6PJG2 1045 aa19.77■□□□□ 0.76
SQSTM1-209ENST00000504627 SHC4Q6S5L8 630 aa19.77■□□□□ 0.76
SQSTM1-209ENST00000504627 TRIM67Q6ZTA4 783 aa19.77■□□□□ 0.76
SQSTM1-209ENST00000504627 APBB1IPQ7Z5R6 666 aaPredicted RBP19.77■□□□□ 0.76
SQSTM1-209ENST00000504627 RABGGTAQ92696 567 aa19.77■□□□□ 0.76
SQSTM1-209ENST00000504627 AK8Q96MA6 479 aa19.77■□□□□ 0.76
SQSTM1-209ENST00000504627 MFSD14AQ96MC6 490 aa19.77■□□□□ 0.76
SQSTM1-209ENST00000504627 ADAM28Q9UKQ2 775 aa19.77■□□□□ 0.76
SQSTM1-209ENST00000504627 TDRD15B5MCY1 1934 aaKnown RBP19.76■□□□□ 0.75
SQSTM1-209ENST00000504627 VWA3AA6NCI4 1184 aa19.76■□□□□ 0.75
SQSTM1-209ENST00000504627 HIP1RO75146 1068 aa19.76■□□□□ 0.75
SQSTM1-209ENST00000504627 RECQL4O94761 1208 aa19.76■□□□□ 0.75
SQSTM1-209ENST00000504627 THP07101 528 aa19.76■□□□□ 0.75
SQSTM1-209ENST00000504627 PEX3P56589 373 aa19.76■□□□□ 0.75
SQSTM1-209ENST00000504627 GRIN1Q05586 938 aa19.76■□□□□ 0.75
SQSTM1-209ENST00000504627 FAM160A1Q05DH4 1040 aa19.76■□□□□ 0.75
SQSTM1-209ENST00000504627 DMP1Q13316 513 aaPredicted RBP19.76■□□□□ 0.75
SQSTM1-209ENST00000504627 TUSC3Q13454 348 aa19.76■□□□□ 0.75
SQSTM1-209ENST00000504627 USP41Q3LFD5 358 aa19.76■□□□□ 0.75
SQSTM1-209ENST00000504627 DCAF4L1Q3SXM0 396 aa19.76■□□□□ 0.75
SQSTM1-209ENST00000504627 ATF7IP2Q5U623 682 aa19.76■□□□□ 0.75
SQSTM1-209ENST00000504627 HFE2Q6ZVN8 426 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms