RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 SP100P23497 879 aaPredicted RBP15.65■□□□□ 0.1
HOXC9-202ENST00000504557 DSC1Q08554 894 aa15.65■□□□□ 0.1
HOXC9-202ENST00000504557 STK38Q15208 465 aa15.65■□□□□ 0.1
HOXC9-202ENST00000504557 APBB1IPQ7Z5R6 666 aaPredicted RBP15.65■□□□□ 0.1
HOXC9-202ENST00000504557 GJD3Q8N144 294 aa15.65■□□□□ 0.1
HOXC9-202ENST00000504557 MYCT1Q8N699 235 aa15.65■□□□□ 0.1
HOXC9-202ENST00000504557 BICD1Q96G01 975 aa15.65■□□□□ 0.1
HOXC9-202ENST00000504557 ACO2Q99798 780 aaKnown RBP15.65■□□□□ 0.1
HOXC9-202ENST00000504557 PAAF1Q9BRP4 392 aa15.65■□□□□ 0.1
HOXC9-202ENST00000504557 COLEC11Q9BWP8 271 aa15.65■□□□□ 0.1
HOXC9-202ENST00000504557 ARHGAP28Q9P2N2 729 aa15.65■□□□□ 0.1
HOXC9-202ENST00000504557 DAXXQ9UER7 740 aaPredicted RBP15.65■□□□□ 0.1
HOXC9-202ENST00000504557 CCDC39Q9UFE4 941 aa15.65■□□□□ 0.1
HOXC9-202ENST00000504557 USP15Q9Y4E8 981 aaPredicted RBP15.65■□□□□ 0.1
HOXC9-202ENST00000504557 HCFC2Q9Y5Z7 792 aa15.65■□□□□ 0.1
HOXC9-202ENST00000504557 CARNS1A5YM72 827 aa15.64■□□□□ 0.09
HOXC9-202ENST00000504557 K7ENM7 598 aa15.64■□□□□ 0.09
HOXC9-202ENST00000504557 PTGESO14684 152 aa15.64■□□□□ 0.09
HOXC9-202ENST00000504557 TBCAO75347 108 aaKnown RBP15.64■□□□□ 0.09
HOXC9-202ENST00000504557 URODP06132 367 aa15.64■□□□□ 0.09
HOXC9-202ENST00000504557 EPCAMP16422 314 aa15.64■□□□□ 0.09
HOXC9-202ENST00000504557 KLRC2P26717 231 aa15.64■□□□□ 0.09
HOXC9-202ENST00000504557 TXLNAP40222 546 aa15.64■□□□□ 0.09
HOXC9-202ENST00000504557 PTPN14Q15678 1187 aa15.64■□□□□ 0.09
HOXC9-202ENST00000504557 SMAD2Q15796 467 aaKnown RBP15.64■□□□□ 0.09
HOXC9-202ENST00000504557 SEZ6Q53EL9 994 aa15.64■□□□□ 0.09
HOXC9-202ENST00000504557 KIAA1841Q6NSI8 718 aa15.64■□□□□ 0.09
HOXC9-202ENST00000504557 ANKRD54Q6NXT1 300 aa15.64■□□□□ 0.09
HOXC9-202ENST00000504557 DYMQ7RTS9 669 aa15.64■□□□□ 0.09
HOXC9-202ENST00000504557 GLYCTKQ8IVS8 523 aa15.64■□□□□ 0.09
HOXC9-202ENST00000504557 C12orf76Q8N812 135 aaPredicted RBP15.64■□□□□ 0.09
HOXC9-202ENST00000504557 SMRP1Q8NCR6 262 aa15.64■□□□□ 0.09
HOXC9-202ENST00000504557 LARP4BQ92615 738 aaKnown RBP15.64■□□□□ 0.09
HOXC9-202ENST00000504557 KHSRPQ92945 711 aaKnown RBP eCLIP15.64■□□□□ 0.09
HOXC9-202ENST00000504557 ZBTB45Q96K62 511 aaPredicted RBP15.64■□□□□ 0.09
HOXC9-202ENST00000504557 CDT1Q9H211 546 aa15.64■□□□□ 0.09
HOXC9-202ENST00000504557 TMEM134Q9H6X4 195 aa15.64■□□□□ 0.09
HOXC9-202ENST00000504557 C17orf75Q9HAS0 396 aa15.64■□□□□ 0.09
HOXC9-202ENST00000504557 MRPL17Q9NRX2 175 aaKnown RBP15.64■□□□□ 0.09
HOXC9-202ENST00000504557 LARSQ9P2J5 1176 aaKnown RBP15.64■□□□□ 0.09
HOXC9-202ENST00000504557 CDH22Q9UJ99 828 aa15.64■□□□□ 0.09
HOXC9-202ENST00000504557 TNFSF13BQ9Y275 285 aa15.64■□□□□ 0.09
HOXC9-202ENST00000504557 RBM19Q9Y4C8 960 aaKnown RBP15.64■□□□□ 0.09
HOXC9-202ENST00000504557 SRPRBQ9Y5M8 271 aaKnown RBP15.64■□□□□ 0.09
HOXC9-202ENST00000504557 VWA8A3KMH1 1905 aa15.64■□□□□ 0.09
HOXC9-202ENST00000504557 C2orf16Q68DN1 1984 aa15.64■□□□□ 0.09
HOXC9-202ENST00000504557 MTCL1Q9Y4B5 1905 aaKnown RBP15.63■□□□□ 0.09
HOXC9-202ENST00000504557 FSD2A1L4K1 749 aa15.63■□□□□ 0.09
HOXC9-202ENST00000504557 INPPL1O15357 1258 aa15.63■□□□□ 0.09
HOXC9-202ENST00000504557 SLC26A4O43511 780 aa15.63■□□□□ 0.09
HOXC9-202ENST00000504557 TADA2AO75478 443 aa15.63■□□□□ 0.09
HOXC9-202ENST00000504557 SOD2P04179 222 aa15.63■□□□□ 0.09
HOXC9-202ENST00000504557 THP07101 528 aa15.63■□□□□ 0.09
HOXC9-202ENST00000504557 WEE2P0C1S8 567 aa15.63■□□□□ 0.09
HOXC9-202ENST00000504557 YARSP54577 528 aaKnown RBP15.63■□□□□ 0.09
HOXC9-202ENST00000504557 COASYQ13057 564 aa15.63■□□□□ 0.09
HOXC9-202ENST00000504557 TUSC3Q13454 348 aa15.63■□□□□ 0.09
HOXC9-202ENST00000504557 RRAGBQ5VZM2 374 aa15.63■□□□□ 0.09
HOXC9-202ENST00000504557 KANK3Q6NY19 840 aa15.63■□□□□ 0.09
HOXC9-202ENST00000504557 KCTD17Q8N5Z5 321 aa15.63■□□□□ 0.09
HOXC9-202ENST00000504557 PDILTQ8N807 584 aa15.63■□□□□ 0.09
HOXC9-202ENST00000504557 KRI1Q8N9T8 703 aaKnown RBP15.63■□□□□ 0.09
HOXC9-202ENST00000504557 TMEM161BQ8NDZ6 487 aa15.63■□□□□ 0.09
HOXC9-202ENST00000504557 CASP10Q92851 521 aa15.63■□□□□ 0.09
HOXC9-202ENST00000504557 ZNF396Q96N95 335 aaPredicted RBP15.63■□□□□ 0.09
HOXC9-202ENST00000504557 CCDC94Q9BW85 323 aaPredicted RBP15.63■□□□□ 0.09
HOXC9-202ENST00000504557 CCSER1Q9C0I3 900 aa15.63■□□□□ 0.09
HOXC9-202ENST00000504557 KCND2Q9NZV8 630 aa15.63■□□□□ 0.09
HOXC9-202ENST00000504557 BDP1A6H8Y1 2624 aa15.63■□□□□ 0.09
HOXC9-202ENST00000504557 TCHHQ07283 1943 aa15.62■□□□□ 0.09
HOXC9-202ENST00000504557 TULP1O00294 542 aaPredicted RBP15.62■□□□□ 0.09
HOXC9-202ENST00000504557 MAPTP10636 758 aaKnown RBP15.62■□□□□ 0.09
HOXC9-202ENST00000504557 GLUD2P49448 558 aa15.62■□□□□ 0.09
HOXC9-202ENST00000504557 ZP2Q05996 745 aa15.62■□□□□ 0.09
HOXC9-202ENST00000504557 PKP1Q13835 747 aa15.62■□□□□ 0.09
HOXC9-202ENST00000504557 GIT2Q14161 759 aa15.62■□□□□ 0.09
HOXC9-202ENST00000504557 HSP90AA2PQ14568 343 aaPredicted RBP15.62■□□□□ 0.09
HOXC9-202ENST00000504557 SLC39A14Q15043 492 aa15.62■□□□□ 0.09
HOXC9-202ENST00000504557 RARS2Q5T160 578 aaKnown RBP15.62■□□□□ 0.09
HOXC9-202ENST00000504557 FUT10Q6P4F1 479 aa15.62■□□□□ 0.09
HOXC9-202ENST00000504557 SYCE2Q6PIF2 218 aa15.62■□□□□ 0.09
HOXC9-202ENST00000504557 MPZL3Q6UWV2 235 aa15.62■□□□□ 0.09
HOXC9-202ENST00000504557 HAUS6Q7Z4H7 955 aa15.62■□□□□ 0.09
HOXC9-202ENST00000504557 CEP57Q86XR8 500 aa15.62■□□□□ 0.09
HOXC9-202ENST00000504557 ADHFE1Q8IWW8 467 aa15.62■□□□□ 0.09
HOXC9-202ENST00000504557 SPIRE2Q8WWL2 714 aa15.62■□□□□ 0.09
HOXC9-202ENST00000504557 RPGRIP1Q96KN7 1286 aa15.62■□□□□ 0.09
HOXC9-202ENST00000504557 HERC2P3Q9BVR0 1158 aa15.62■□□□□ 0.09
HOXC9-202ENST00000504557 EMILIN2Q9BXX0 1053 aa15.62■□□□□ 0.09
HOXC9-202ENST00000504557 GPR62Q9BZJ7 368 aa15.62■□□□□ 0.09
HOXC9-202ENST00000504557 GOLGA2P5Q9HBQ8 144 aa15.62■□□□□ 0.09
HOXC9-202ENST00000504557 ADAM28Q9UKQ2 775 aa15.62■□□□□ 0.09
HOXC9-202ENST00000504557 ODF2LQ9ULJ1 636 aa15.62■□□□□ 0.09
HOXC9-202ENST00000504557 SPTLC2O15270 562 aa15.61■□□□□ 0.09
HOXC9-202ENST00000504557 KIF4AO95239 1232 aa15.61■□□□□ 0.09
HOXC9-202ENST00000504557 CNPP09543 421 aaKnown RBP15.61■□□□□ 0.09
HOXC9-202ENST00000504557 ZSCAN22P10073 491 aaPredicted RBP15.61■□□□□ 0.09
HOXC9-202ENST00000504557 NMT1P30419 496 aaKnown RBP15.61■□□□□ 0.09
HOXC9-202ENST00000504557 DDIT3P35638 169 aa15.61■□□□□ 0.09
HOXC9-202ENST00000504557 GRM5P41594 1212 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms