RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 ALDH2P05091 517 aa10.13□□□□□ -0.79
DHFR-202ENST00000504396 OR1G1P47890 313 aa10.13□□□□□ -0.79
DHFR-202ENST00000504396 TARBP2Q15633 366 aaKnown RBP10.13□□□□□ -0.79
DHFR-202ENST00000504396 C15orf39Q6ZRI6 1047 aa10.13□□□□□ -0.79
DHFR-202ENST00000504396 GET4Q7L5D6 327 aaPredicted RBP10.13□□□□□ -0.79
DHFR-202ENST00000504396 GLYCTKQ8IVS8 523 aa10.13□□□□□ -0.79
DHFR-202ENST00000504396 KIAA2013Q8IYS2 634 aa10.13□□□□□ -0.79
DHFR-202ENST00000504396 FBXL16Q8N461 479 aa10.13□□□□□ -0.79
DHFR-202ENST00000504396 TBCKQ8TEA7 893 aa10.13□□□□□ -0.79
DHFR-202ENST00000504396 SLC7A3Q8WY07 619 aa10.13□□□□□ -0.79
DHFR-202ENST00000504396 SMG7Q92540 1137 aaKnown RBP10.13□□□□□ -0.79
DHFR-202ENST00000504396 JAKMIP1Q96N16 626 aaKnown RBP10.13□□□□□ -0.79
DHFR-202ENST00000504396 ARHGAP9Q9BRR9 750 aa10.13□□□□□ -0.79
DHFR-202ENST00000504396 RNF26Q9BY78 433 aaPredicted RBP10.13□□□□□ -0.79
DHFR-202ENST00000504396 NIFKQ9BYG3 293 aaKnown RBP10.13□□□□□ -0.79
DHFR-202ENST00000504396 TBC1D17Q9HA65 648 aa10.13□□□□□ -0.79
DHFR-202ENST00000504396 SH3GLB2Q9NR46 395 aa10.13□□□□□ -0.79
DHFR-202ENST00000504396 AGPAT5Q9NUQ2 364 aa10.13□□□□□ -0.79
DHFR-202ENST00000504396 KANSL3Q9P2N6 904 aa10.13□□□□□ -0.79
DHFR-202ENST00000504396 DPP7Q9UHL4 492 aa10.13□□□□□ -0.79
DHFR-202ENST00000504396 SSX2IPQ9Y2D8 614 aa10.13□□□□□ -0.79
DHFR-202ENST00000504396 COL4A3BPQ9Y5P4 624 aa10.13□□□□□ -0.79
DHFR-202ENST00000504396 CLUHO75153 1309 aa10.13□□□□□ -0.79
DHFR-202ENST00000504396 IGKV6-21A0A0C4DH24 114 aa10.12□□□□□ -0.79
DHFR-202ENST00000504396 NRP1O14786 923 aa10.12□□□□□ -0.79
DHFR-202ENST00000504396 DDHD2O94830 711 aa10.12□□□□□ -0.79
DHFR-202ENST00000504396 ERLIN2O94905 339 aa10.12□□□□□ -0.79
DHFR-202ENST00000504396 TDP2O95551 362 aa10.12□□□□□ -0.79
DHFR-202ENST00000504396 SPATA31D3P0C874 917 aa10.12□□□□□ -0.79
DHFR-202ENST00000504396 SRGAP2CP0DJJ0 459 aa10.12□□□□□ -0.79
DHFR-202ENST00000504396 GRM5P41594 1212 aa10.12□□□□□ -0.79
DHFR-202ENST00000504396 GLUD2P49448 558 aa10.12□□□□□ -0.79
DHFR-202ENST00000504396 ZC3H14Q6PJT7 736 aaKnown RBP10.12□□□□□ -0.79
DHFR-202ENST00000504396 AGMOQ6ZNB7 445 aa10.12□□□□□ -0.79
DHFR-202ENST00000504396 SPATA31D4Q6ZUB0 917 aa10.12□□□□□ -0.79
DHFR-202ENST00000504396 DGLUCYQ7Z3D6 616 aa10.12□□□□□ -0.79
DHFR-202ENST00000504396 EXOC8Q8IYI6 725 aa10.12□□□□□ -0.79
DHFR-202ENST00000504396 FAM177A1Q8N128 213 aaPredicted RBP10.12□□□□□ -0.79
DHFR-202ENST00000504396 TMEM175Q9BSA9 504 aa10.12□□□□□ -0.79
DHFR-202ENST00000504396 APOL6Q9BWW8 343 aa10.12□□□□□ -0.79
DHFR-202ENST00000504396 PPME1Q9Y570 386 aa10.12□□□□□ -0.79
DHFR-202ENST00000504396 CNTNAP2Q9UHC6 1331 aa10.12□□□□□ -0.79
DHFR-202ENST00000504396 FAM186AA6NE01 2351 aa10.12□□□□□ -0.79
DHFR-202ENST00000504396 PTPRZ1P23471 2315 aaPredicted RBP10.11□□□□□ -0.79
DHFR-202ENST00000504396 KRBA1A5PL33 1030 aa10.11□□□□□ -0.79
DHFR-202ENST00000504396 TEX28O15482 410 aa10.11□□□□□ -0.79
DHFR-202ENST00000504396 N4BP1O75113 896 aaKnown RBP10.11□□□□□ -0.79
DHFR-202ENST00000504396 MAFO75444 373 aaPredicted RBP10.11□□□□□ -0.79
DHFR-202ENST00000504396 RFPL2O75678 378 aa10.11□□□□□ -0.79
DHFR-202ENST00000504396 PSMD10O75832 226 aa10.11□□□□□ -0.79
DHFR-202ENST00000504396 SOD2P04179 222 aa10.11□□□□□ -0.79
DHFR-202ENST00000504396 DCNP07585 359 aaKnown RBP10.11□□□□□ -0.79
DHFR-202ENST00000504396 ITGA4P13612 1032 aa10.11□□□□□ -0.79
DHFR-202ENST00000504396 AFF1P51825 1210 aaKnown RBP10.11□□□□□ -0.79
DHFR-202ENST00000504396 WDR4P57081 412 aaKnown RBP10.11□□□□□ -0.79
DHFR-202ENST00000504396 PSMC5P62195 406 aa10.11□□□□□ -0.79
DHFR-202ENST00000504396 CCT2P78371 535 aaKnown RBP10.11□□□□□ -0.79
DHFR-202ENST00000504396 Q4G0T1 1027 aa10.11□□□□□ -0.79
DHFR-202ENST00000504396 BLOC1S2Q6QNY1 142 aa10.11□□□□□ -0.79
DHFR-202ENST00000504396 CYP26C1Q6V0L0 522 aa10.11□□□□□ -0.79
DHFR-202ENST00000504396 PALB2Q86YC2 1186 aa10.11□□□□□ -0.79
DHFR-202ENST00000504396 TRIM22Q8IYM9 498 aa10.11□□□□□ -0.79
DHFR-202ENST00000504396 ST13P5Q8NFI4 369 aaPredicted RBP10.11□□□□□ -0.79
DHFR-202ENST00000504396 PSPC1Q8WXF1 523 aaKnown RBP10.11□□□□□ -0.79
DHFR-202ENST00000504396 TMEM143Q96AN5 459 aa10.11□□□□□ -0.79
DHFR-202ENST00000504396 CEP170P1Q96L14 293 aa10.11□□□□□ -0.79
DHFR-202ENST00000504396 RPS6KC1Q96S38 1066 aa10.11□□□□□ -0.79
DHFR-202ENST00000504396 HERC2P3Q9BVR0 1158 aa10.11□□□□□ -0.79
DHFR-202ENST00000504396 RHOBTB2Q9BYZ6 727 aa10.11□□□□□ -0.79
DHFR-202ENST00000504396 WDR6Q9NNW5 1121 aaKnown RBP10.11□□□□□ -0.79
DHFR-202ENST00000504396 WNT16Q9UBV4 365 aa10.11□□□□□ -0.79
DHFR-202ENST00000504396 VPS13AQ96RL7 3174 aa10.1□□□□□ -0.79
DHFR-202ENST00000504396 RIF1Q5UIP0 2472 aaKnown RBP10.1□□□□□ -0.79
DHFR-202ENST00000504396 MARCH6O60337 910 aa10.1□□□□□ -0.79
DHFR-202ENST00000504396 DKC1O60832 514 aaKnown RBP eCLIP10.1□□□□□ -0.798e-28■■□□□ 13.8
DHFR-202ENST00000504396 SRFP11831 508 aa10.1□□□□□ -0.79
DHFR-202ENST00000504396 IFNAR1P17181 557 aa10.1□□□□□ -0.79
DHFR-202ENST00000504396 FSHRP23945 695 aa10.1□□□□□ -0.79
DHFR-202ENST00000504396 MLH1P40692 756 aa10.1□□□□□ -0.79
DHFR-202ENST00000504396 NPEPPSP55786 919 aa10.1□□□□□ -0.79
DHFR-202ENST00000504396 NR5A1Q13285 461 aa10.1□□□□□ -0.79
DHFR-202ENST00000504396 MOXD1Q6UVY6 613 aa10.1□□□□□ -0.79
DHFR-202ENST00000504396 ANO5Q75V66 913 aa10.1□□□□□ -0.79
DHFR-202ENST00000504396 VASH1Q7L8A9 365 aaPredicted RBP10.1□□□□□ -0.79
DHFR-202ENST00000504396 SLC44A3Q8N4M1 653 aa10.1□□□□□ -0.79
DHFR-202ENST00000504396 CMASQ8NFW8 434 aaPredicted RBP10.1□□□□□ -0.79
DHFR-202ENST00000504396 GPR152Q8TDT2 470 aa10.1□□□□□ -0.79
DHFR-202ENST00000504396 KCNB2Q92953 911 aa10.1□□□□□ -0.79
DHFR-202ENST00000504396 ZNF775Q96BV0 537 aaPredicted RBP10.1□□□□□ -0.79
DHFR-202ENST00000504396 RMDN1Q96DB5 314 aa10.1□□□□□ -0.79
DHFR-202ENST00000504396 B3GALT6Q96L58 329 aa10.1□□□□□ -0.79
DHFR-202ENST00000504396 MYADMQ96S97 322 aa10.1□□□□□ -0.79
DHFR-202ENST00000504396 OCSTAMPQ9BR26 566 aa10.1□□□□□ -0.79
DHFR-202ENST00000504396 AGXT2Q9BYV1 514 aa10.1□□□□□ -0.79
DHFR-202ENST00000504396 TRIM6Q9C030 488 aaPredicted RBP10.1□□□□□ -0.79
DHFR-202ENST00000504396 SEMA4AQ9H3S1 761 aa10.1□□□□□ -0.79
DHFR-202ENST00000504396 IFT122Q9HBG6 1241 aa10.1□□□□□ -0.79
DHFR-202ENST00000504396 NCOA5Q9HCD5 579 aaKnown RBP10.1□□□□□ -0.79
DHFR-202ENST00000504396 ARHGEF3Q9NR81 526 aa10.1□□□□□ -0.79
DHFR-202ENST00000504396 MARCH5Q9NX47 278 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms