RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 VSIG10L2P0DP72 767 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 GYPEP15421 78 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 SMARCA1P28370 1054 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 CASRP41180 1078 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 WNT3AP56704 352 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 PLP2Q04941 152 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 BRD3Q15059 726 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 TBR1Q16650 682 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 ZNF827Q17R98 1081 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 KIAA0753Q2KHM9 967 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 SYCP2LQ5T4T6 812 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 SLFN13Q68D06 897 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 GLB1LQ6UWU2 654 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 PDZD4Q76G19 769 aaPredicted RBP6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 OVCH2Q7RTZ1 564 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 C3orf20Q8ND61 904 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 REPS2Q8NFH8 660 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 OR7D4Q8NG98 312 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 MDM1Q8TC05 714 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 PDCD2LQ9BRP1 358 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 BDH2Q9BUT1 245 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 ARMT1Q9H993 441 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 SEC61A2Q9H9S3 476 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 AJAP1Q9UKB5 411 aaPredicted RBP6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 POLHQ9Y253 713 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 STXBP5LQ9Y2K9 1186 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 PCDHA3Q9Y5H8 950 aa6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 MYBBP1AQ9BQG0 1328 aaKnown RBP6.24□□□□□ -1.41
TRAPPC13-205ENST00000504243 NPEPPSL1A6NEC2 478 aa6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 H3BUI4 141 aa6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 NRP1O14786 923 aa6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 B3GALT2O43825 422 aa6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 CRHR1P34998 444 aa6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 SREBF1P36956 1147 aa6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 SLC6A9P48067 706 aa6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 MAP2K6P52564 334 aa6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 NPEPPSP55786 919 aa6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 PURAQ00577 322 aaKnown RBP6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 CDC42EP1Q00587 391 aa6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 OS9Q13438 667 aaPredicted RBP6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 PICALMQ13492 652 aa6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 SAFBQ15424 915 aaKnown RBP eCLIP6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 RNF151Q2KHN1 245 aa6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 KHDC1Q4VXA5 237 aaKnown RBP6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 SRGAP1Q7Z6B7 1085 aa6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 FAM156AQ8NDB6 213 aa6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 ARL8AQ96BM9 186 aa6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 CYFIP2Q96F07 1278 aa6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 CDK5RAP3Q96JB5 506 aa6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 VRK1Q99986 396 aaPredicted RBP6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 SARGQ9BW04 601 aa6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 B3GNT5Q9BYG0 378 aa6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 TRPS1Q9UHF7 1281 aa6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 USP25Q9UHP3 1055 aa6.23□□□□□ -1.41
TRAPPC13-205ENST00000504243 FAM227AF5H4B4 570 aa6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 TPP1O14773 563 aa6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 SLC16A6O15403 523 aa6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 SGTAO43765 313 aa6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 GPR32O75388 356 aa6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 TUSC2O75896 110 aa6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 CNOT4O95628 575 aaKnown RBP6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 GASTP01350 101 aa6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 ITGB3P05106 788 aa6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 RAP2AP10114 183 aa6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 TRIM27P14373 513 aa6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 DDCP20711 480 aa6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 ADCY7P51828 1080 aa6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 RAC3P60763 192 aa6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 DSC2Q02487 901 aa6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 IL31Q6EBC2 164 aa6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 NPNTQ6UXI9 565 aa6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 CMTM4Q8IZR5 234 aa6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 PJA1Q8NG27 643 aa6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 KLHDC4Q8TBB5 520 aa6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 HOXB13Q92826 284 aaPredicted RBP6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 LMBRD1Q9NUN5 540 aa6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 RUVBL1Q9Y265 456 aaKnown RBP6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 SIK3Q9Y2K2 1263 aa6.22□□□□□ -1.41
TRAPPC13-205ENST00000504243 A0A1W2PRX2 142 aa6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 CAPN8A6NHC0 703 aa6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 A6NNZ2 444 aa6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 K7ESM1 405 aa6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 USP14P54578 494 aa6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 RHBDL3P58872 404 aa6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 APBA1Q02410 837 aa6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 CREMQ03060 361 aa6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 TARDBPQ13148 414 aaKnown RBP eCLIP6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 NOGQ13253 232 aa6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 BIRC2Q13490 618 aa6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 NFYCQ13952 458 aa6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 UBE4AQ14139 1066 aa6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 GAGE13Q4V321 117 aa6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 PRAMEF14Q5SWL7 426 aa6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 DARS2Q6PI48 645 aaKnown RBP6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 CHST15Q7LFX5 561 aaPredicted RBP6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 NSUN6Q8TEA1 469 aaKnown RBP6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 MTFMTQ96DP5 389 aaKnown RBP6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 RBM15Q96T37 977 aaKnown RBP eCLIP6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 PSMD1Q99460 953 aa6.21□□□□□ -1.42
TRAPPC13-205ENST00000504243 MPHOSPH6Q99547 160 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms