RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 MAN1C1Q9NR34 630 aa24.28■■□□□ 1.48
LSM6-203ENST00000503982 CACNG4Q9UBN1 327 aa24.28■■□□□ 1.48
LSM6-203ENST00000503982 DPP7Q9UHL4 492 aa24.28■■□□□ 1.48
LSM6-203ENST00000503982 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.28■■□□□ 1.48
LSM6-203ENST00000503982 ZMYM2Q9UBW7 1377 aa24.28■■□□□ 1.48
LSM6-203ENST00000503982 TEX28O15482 410 aa24.27■■□□□ 1.48
LSM6-203ENST00000503982 HIP1RO75146 1068 aa24.27■■□□□ 1.48
LSM6-203ENST00000503982 GLUD1P00367 558 aa24.27■■□□□ 1.48
LSM6-203ENST00000503982 THP07101 528 aa24.27■■□□□ 1.48
LSM6-203ENST00000503982 HSP90AA2PQ14568 343 aaPredicted RBP24.27■■□□□ 1.48
LSM6-203ENST00000503982 USP41Q3LFD5 358 aa24.27■■□□□ 1.48
LSM6-203ENST00000503982 EEF1DP3Q658K8 133 aa24.27■■□□□ 1.48
LSM6-203ENST00000503982 GSTCDQ8NEC7 633 aa24.27■■□□□ 1.48
LSM6-203ENST00000503982 RIN2Q8WYP3 895 aaPredicted RBP24.27■■□□□ 1.48
LSM6-203ENST00000503982 B3GALT6Q96L58 329 aa24.27■■□□□ 1.48
LSM6-203ENST00000503982 PLIN2Q99541 437 aa24.27■■□□□ 1.48
LSM6-203ENST00000503982 ARIH1Q9Y4X5 557 aaPredicted RBP24.27■■□□□ 1.48
LSM6-203ENST00000503982 MTCL1Q9Y4B5 1905 aaKnown RBP24.26■■□□□ 1.47
LSM6-203ENST00000503982 VWA3AA6NCI4 1184 aa24.26■■□□□ 1.47
LSM6-203ENST00000503982 LILRB3O75022 631 aa24.26■■□□□ 1.47
LSM6-203ENST00000503982 SIGLEC14Q08ET2 396 aa24.26■■□□□ 1.47
LSM6-203ENST00000503982 DMP1Q13316 513 aaPredicted RBP24.26■■□□□ 1.47
LSM6-203ENST00000503982 IL17AQ16552 155 aa24.26■■□□□ 1.47
LSM6-203ENST00000503982 PALB2Q86YC2 1186 aa24.26■■□□□ 1.47
LSM6-203ENST00000503982 ACSF2Q96CM8 615 aaPredicted RBP24.26■■□□□ 1.47
LSM6-203ENST00000503982 DRC1Q96MC2 740 aa24.26■■□□□ 1.47
LSM6-203ENST00000503982 GPR62Q9BZJ7 368 aa24.26■■□□□ 1.47
LSM6-203ENST00000503982 KMT5AQ9NQR1 393 aa24.26■■□□□ 1.47
LSM6-203ENST00000503982 EDN1P05305 212 aa24.25■■□□□ 1.47
LSM6-203ENST00000503982 DSG1Q02413 1049 aa24.25■■□□□ 1.47
LSM6-203ENST00000503982 KIAA0319Q5VV43 1072 aa24.25■■□□□ 1.47
LSM6-203ENST00000503982 LARP1BQ659C4 914 aaKnown RBP24.25■■□□□ 1.47
LSM6-203ENST00000503982 CCDC149Q6ZUS6 474 aa24.25■■□□□ 1.47
LSM6-203ENST00000503982 GPR149Q86SP6 731 aa24.25■■□□□ 1.47
LSM6-203ENST00000503982 CEP57Q86XR8 500 aa24.25■■□□□ 1.47
LSM6-203ENST00000503982 KREMEN2Q8NCW0 462 aa24.25■■□□□ 1.47
LSM6-203ENST00000503982 SF3B1O75533 1304 aaKnown RBP eCLIP24.25■■□□□ 1.478e-6■■■■■ 107
LSM6-203ENST00000503982 PHLPP2Q6ZVD8 1323 aa24.25■■□□□ 1.47
LSM6-203ENST00000503982 DENND4AQ7Z401 1863 aa24.25■■□□□ 1.47
LSM6-203ENST00000503982 SPATA31D3P0C874 917 aa24.24■■□□□ 1.47
LSM6-203ENST00000503982 ATP2C1P98194 919 aaPredicted RBP24.24■■□□□ 1.47
LSM6-203ENST00000503982 RAD51AP2Q09MP3 1159 aa24.24■■□□□ 1.47
LSM6-203ENST00000503982 NT5DC1Q5TFE4 455 aa24.24■■□□□ 1.47
LSM6-203ENST00000503982 SPATA31D4Q6ZUB0 917 aa24.24■■□□□ 1.47
LSM6-203ENST00000503982 PLCD3Q8N3E9 789 aa24.24■■□□□ 1.47
LSM6-203ENST00000503982 PAAF1Q9BRP4 392 aa24.24■■□□□ 1.47
LSM6-203ENST00000503982 RUSC1Q9BVN2 902 aa24.24■■□□□ 1.47
LSM6-203ENST00000503982 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.24■■□□□ 1.47
LSM6-203ENST00000503982 TRIOO75962 3097 aa24.24■■□□□ 1.47
LSM6-203ENST00000503982 CCDC195A0A1B0GUA6 201 aa24.23■■□□□ 1.47
LSM6-203ENST00000503982 RPL17P18621 184 aaKnown RBP24.23■■□□□ 1.47
LSM6-203ENST00000503982 NPTX2P47972 431 aa24.23■■□□□ 1.47
LSM6-203ENST00000503982 YARSP54577 528 aaKnown RBP24.23■■□□□ 1.47
LSM6-203ENST00000503982 CREMQ03060 361 aa24.23■■□□□ 1.47
LSM6-203ENST00000503982 MTMR3Q13615 1198 aa24.23■■□□□ 1.47
LSM6-203ENST00000503982 RINT1Q6NUQ1 792 aa24.23■■□□□ 1.47
LSM6-203ENST00000503982 RNF168Q8IYW5 571 aaPredicted RBP24.23■■□□□ 1.47
LSM6-203ENST00000503982 TCHPQ9BT92 498 aa24.23■■□□□ 1.47
LSM6-203ENST00000503982 MMTAG2Q9BU76 263 aaKnown RBP24.23■■□□□ 1.47
LSM6-203ENST00000503982 CCDC94Q9BW85 323 aaPredicted RBP24.23■■□□□ 1.47
LSM6-203ENST00000503982 MRPL4Q9BYD3 311 aaKnown RBP24.23■■□□□ 1.47
LSM6-203ENST00000503982 NT5C3AQ9H0P0 336 aa24.23■■□□□ 1.47
LSM6-203ENST00000503982 PIDD1Q9HB75 910 aa24.23■■□□□ 1.47
LSM6-203ENST00000503982 RXFP1Q9HBX9 757 aa24.23■■□□□ 1.47
LSM6-203ENST00000503982 LIMD1Q9UGP4 676 aa24.23■■□□□ 1.47
LSM6-203ENST00000503982 PTGESO14684 152 aa24.22■■□□□ 1.47
LSM6-203ENST00000503982 KIF4AO95239 1232 aa24.22■■□□□ 1.47
LSM6-203ENST00000503982 HARSP12081 509 aaKnown RBP24.22■■□□□ 1.47
LSM6-203ENST00000503982 OSTNP61366 133 aa24.22■■□□□ 1.47
LSM6-203ENST00000503982 ZNF568Q3ZCX4 644 aa24.22■■□□□ 1.47
LSM6-203ENST00000503982 GLRA4Q5JXX5 417 aa24.22■■□□□ 1.47
LSM6-203ENST00000503982 KCNK18Q7Z418 384 aa24.22■■□□□ 1.47
LSM6-203ENST00000503982 RASSF8Q8NHQ8 419 aa24.22■■□□□ 1.47
LSM6-203ENST00000503982 FEZF2Q8TBJ5 459 aa24.22■■□□□ 1.47
LSM6-203ENST00000503982 CHST7Q9NS84 486 aa24.22■■□□□ 1.47
LSM6-203ENST00000503982 SORCS3Q9UPU3 1222 aa24.22■■□□□ 1.47
LSM6-203ENST00000503982 CITO14578 2027 aa24.22■■□□□ 1.47
LSM6-203ENST00000503982 SFI1A8K8P3 1242 aa24.21■■□□□ 1.47
LSM6-203ENST00000503982 SLC16A4O15374 487 aa24.21■■□□□ 1.47
LSM6-203ENST00000503982 ASGR2P07307 311 aa24.21■■□□□ 1.47
LSM6-203ENST00000503982 STRN3Q13033 797 aa24.21■■□□□ 1.47
LSM6-203ENST00000503982 FAM171A1Q5VUB5 890 aa24.21■■□□□ 1.47
LSM6-203ENST00000503982 PRSS55Q6UWB4 352 aaPredicted RBP24.21■■□□□ 1.47
LSM6-203ENST00000503982 OTOP3Q7RTS5 596 aa24.21■■□□□ 1.47
LSM6-203ENST00000503982 BMP8AQ7Z5Y6 402 aa24.21■■□□□ 1.47
LSM6-203ENST00000503982 TTPALQ9BTX7 342 aa24.21■■□□□ 1.47
LSM6-203ENST00000503982 TIPINQ9BVW5 301 aa24.21■■□□□ 1.47
LSM6-203ENST00000503982 CXCL16Q9H2A7 254 aa24.21■■□□□ 1.47
LSM6-203ENST00000503982 TMEM134Q9H6X4 195 aa24.21■■□□□ 1.47
LSM6-203ENST00000503982 TNFSF13BQ9Y275 285 aa24.21■■□□□ 1.47
LSM6-203ENST00000503982 USTQ9Y2C2 406 aa24.21■■□□□ 1.47
LSM6-203ENST00000503982 MATR3P43243 847 aaKnown RBP eCLIP24.2■■□□□ 1.46
LSM6-203ENST00000503982 C15orf39Q6ZRI6 1047 aa24.2■■□□□ 1.46
LSM6-203ENST00000503982 C1orf186Q6ZWK4 172 aa24.2■■□□□ 1.46
LSM6-203ENST00000503982 ZDHHC14Q8IZN3 488 aa24.2■■□□□ 1.46
LSM6-203ENST00000503982 SMG7Q92540 1137 aaKnown RBP24.2■■□□□ 1.46
LSM6-203ENST00000503982 PNMA5Q96PV4 448 aa24.2■■□□□ 1.46
LSM6-203ENST00000503982 ACO2Q99798 780 aaKnown RBP24.2■■□□□ 1.46
LSM6-203ENST00000503982 TOPORSQ9NS56 1045 aaPredicted RBP24.2■■□□□ 1.46
LSM6-203ENST00000503982 FNIP2Q9P278 1114 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms