RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.04■■□□□ 1.281e-7■■■■■ 61.1
UBE2D3-216ENST00000503742 ANKFY1Q9P2R3 1169 aa23.04■■□□□ 1.28
UBE2D3-216ENST00000503742 TTLL13PA6NNM8 815 aa23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 RHOXF2BP0C7M4 288 aa23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 BRD3Q15059 726 aa23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 TMCO3Q6UWJ1 677 aa23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 RNF149Q8NC42 400 aa23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 EPS8L1Q8TE68 723 aa23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 TATDN2Q93075 761 aa23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 RHOXF2Q9BQY4 288 aa23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 MRPL4Q9BYD3 311 aaKnown RBP23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 RBAKQ9NYW8 714 aaPredicted RBP23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 SUCLA2Q9P2R7 463 aaPredicted RBP23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 NOCTQ9UK39 431 aaKnown RBP23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 CNTNAP2Q9UHC6 1331 aa23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 CCDC151A5D8V7 595 aa23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 SRGAP2CP0DJJ0 459 aa23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 CXCR5P32302 372 aa23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 NOP2P46087 812 aaKnown RBP23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 GCNT1Q02742 428 aa23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 CC2D1AQ6P1N0 951 aaPredicted RBP23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 SLFN11Q7Z7L1 901 aa23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 PPTC7Q8NI37 304 aa23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 FAM84AQ96KN4 292 aa23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 C2orf40Q9H1Z8 148 aa23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 RNPEPQ9H4A4 650 aa23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 TAS2R14Q9NYV8 317 aa23.03■■□□□ 1.28
UBE2D3-216ENST00000503742 PTPRJQ12913 1337 aa23.02■■□□□ 1.28
UBE2D3-216ENST00000503742 TULP1O00294 542 aaPredicted RBP23.02■■□□□ 1.28
UBE2D3-216ENST00000503742 FAM189A1O60320 539 aa23.02■■□□□ 1.28
UBE2D3-216ENST00000503742 TOM1L1O75674 476 aa23.02■■□□□ 1.28
UBE2D3-216ENST00000503742 SGPL1O95470 568 aa23.02■■□□□ 1.28
UBE2D3-216ENST00000503742 LGALS2P05162 132 aa23.02■■□□□ 1.28
UBE2D3-216ENST00000503742 TDRD10Q5VZ19 366 aaKnown RBP23.02■■□□□ 1.28
UBE2D3-216ENST00000503742 CST9Q5W186 159 aa23.02■■□□□ 1.28
UBE2D3-216ENST00000503742 ZBTB8OSQ8IWT0 167 aa23.02■■□□□ 1.28
UBE2D3-216ENST00000503742 PSMB7Q99436 277 aa23.02■■□□□ 1.28
UBE2D3-216ENST00000503742 ACO2Q99798 780 aaKnown RBP23.02■■□□□ 1.28
UBE2D3-216ENST00000503742 TMCO5BA8MYB1 307 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 CYP26A1O43174 497 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 CHRNB2P17787 502 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 TNNI1P19237 187 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 MATR3P43243 847 aaKnown RBP eCLIP23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 LMBRD2Q68DH5 695 aaPredicted RBP23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 ILDR2Q71H61 639 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 ENOSF1Q7L5Y1 443 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 NOP9Q86U38 636 aaKnown RBP23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 RFFLQ8WZ73 363 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 MAML3Q96JK9 1138 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 ISCUQ9H1K1 167 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 RNF14Q9UBS8 474 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 ANKRD62A6NC57 917 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 ABLIM1O14639 778 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 CLDN3O15551 220 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 C22orf31O95567 290 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 PRKCBP05771 671 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 TUBBP07437 444 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 USP8P40818 1118 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 ADCYAP1R1P41586 468 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 MAPK6Q16659 721 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 ZNF484Q5JVG2 852 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 EFCAB12Q6NXP0 572 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 PLEKHH3Q7Z736 793 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 DPP9Q86TI2 863 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 RPUSD2Q8IZ73 545 aaKnown RBP23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 FAM81BQ96LP2 452 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 CGRRF1Q99675 332 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 PI4K2AQ9BTU6 479 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 FAM53CQ9NYF3 392 aa23.01■■□□□ 1.27
UBE2D3-216ENST00000503742 HLA-DRAP01903 254 aa23■■□□□ 1.27
UBE2D3-216ENST00000503742 MAPK4P31152 587 aa23■■□□□ 1.27
UBE2D3-216ENST00000503742 SLC47A2Q86VL8 602 aa23■■□□□ 1.27
UBE2D3-216ENST00000503742 RHPN2Q8IUC4 686 aa23■■□□□ 1.27
UBE2D3-216ENST00000503742 MMGT1Q8N4V1 131 aa23■■□□□ 1.27
UBE2D3-216ENST00000503742 LMBR1Q8WVP7 490 aa23■■□□□ 1.27
UBE2D3-216ENST00000503742 HNRNPLLQ8WVV9 542 aaKnown RBP23■■□□□ 1.27
UBE2D3-216ENST00000503742 CTNNBL1Q8WYA6 563 aaPredicted RBP23■■□□□ 1.27
UBE2D3-216ENST00000503742 ARID3AQ99856 593 aa23■■□□□ 1.27
UBE2D3-216ENST00000503742 SEPT11Q9NVA2 429 aaKnown RBP23■■□□□ 1.27
UBE2D3-216ENST00000503742 EVPLQ92817 2033 aa23■■□□□ 1.27
UBE2D3-216ENST00000503742 ZNF236Q9UL36 1845 aa23■■□□□ 1.27
UBE2D3-216ENST00000503742 VNN1O95497 513 aa23■■□□□ 1.27
UBE2D3-216ENST00000503742 TFDP1Q14186 410 aa23■■□□□ 1.27
UBE2D3-216ENST00000503742 BRSK2Q8IWQ3 736 aa23■■□□□ 1.27
UBE2D3-216ENST00000503742 SPATA4Q8NEY3 305 aa23■■□□□ 1.27
UBE2D3-216ENST00000503742 AFG1LQ8WV93 481 aa23■■□□□ 1.27
UBE2D3-216ENST00000503742 ELMO3Q96BJ8 720 aa23■■□□□ 1.27
UBE2D3-216ENST00000503742 PCDHB18PQ96TA0 734 aa23■■□□□ 1.27
UBE2D3-216ENST00000503742 FZD8Q9H461 694 aa23■■□□□ 1.27
UBE2D3-216ENST00000503742 PACSIN2Q9UNF0 486 aaPredicted RBP23■■□□□ 1.27
UBE2D3-216ENST00000503742 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.99■■□□□ 1.27
UBE2D3-216ENST00000503742 CES2O00748 559 aa22.99■■□□□ 1.27
UBE2D3-216ENST00000503742 ASAP2O43150 1006 aa22.99■■□□□ 1.27
UBE2D3-216ENST00000503742 SEC31AO94979 1220 aaKnown RBP22.99■■□□□ 1.27
UBE2D3-216ENST00000503742 GZMAP12544 262 aa22.99■■□□□ 1.27
UBE2D3-216ENST00000503742 INSRRP14616 1297 aa22.99■■□□□ 1.27
UBE2D3-216ENST00000503742 MCL1Q07820 350 aa22.99■■□□□ 1.27
UBE2D3-216ENST00000503742 C2orf54Q08AI8 447 aa22.99■■□□□ 1.27
UBE2D3-216ENST00000503742 WDR93Q6P2C0 686 aa22.99■■□□□ 1.27
UBE2D3-216ENST00000503742 SLC35G2Q8TBE7 412 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms