RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 STAMQ92783 540 aa12.38□□□□□ -0.43
UBE2D3-211ENST00000502404 COLEC11Q9BWP8 271 aa12.38□□□□□ -0.43
UBE2D3-211ENST00000502404 ANKEF1Q9NU02 776 aa12.38□□□□□ -0.43
UBE2D3-211ENST00000502404 ORC3Q9UBD5 711 aaPredicted RBP12.38□□□□□ -0.43
UBE2D3-211ENST00000502404 PCDHA12Q9UN75 941 aa12.38□□□□□ -0.43
UBE2D3-211ENST00000502404 MEIS3P2A8K0S8 358 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 INO80B-WBP1J3KQ70 363 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 GFRA3O60609 400 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 PFKFB2O60825 505 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 DGAT1O75907 488 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 DDHD2O94830 711 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 C1RP00736 705 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 SOD2P04179 222 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 SSBP05455 408 aaKnown RBP eCLIP12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 CNPP09543 421 aaKnown RBP12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 KRT2P35908 639 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 OR1G1P47890 313 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 CLCN4P51793 760 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 AK2P54819 239 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 PTENP60484 403 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 SCRN1Q12765 414 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 TDGQ13569 410 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 CMASQ8NFW8 434 aaPredicted RBP12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 BCL7CQ8WUZ0 217 aaPredicted RBP12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 HAS1Q92839 578 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 DYDC2Q96IM9 177 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 RPS6KC1Q96S38 1066 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 RGL1Q9NZL6 768 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 IGSF9Q9P2J2 1179 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 CDH22Q9UJ99 828 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 GIT1Q9Y2X7 761 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 CACNA1HO95180 2353 aa12.37□□□□□ -0.43
UBE2D3-211ENST00000502404 H0Y858 1186 aa12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 LYPLA2O95372 231 aa12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 ASGR2P07307 311 aa12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 XRCC6P12956 609 aaKnown RBP eCLIP12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 GLUD2P49448 558 aa12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 ANAPC15P60006 121 aa12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 CYP4A11Q02928 519 aa12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 CREMQ03060 361 aa12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 TRIM29Q14134 588 aa12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 CTTNQ14247 550 aaKnown RBP12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 CALCRLQ16602 461 aa12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 UBXN11Q5T124 520 aa12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 GPR65Q8IYL9 337 aa12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 HDAC7Q8WUI4 952 aa12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 NXPE3Q969Y0 559 aa12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 EIF2AK1Q9BQI3 630 aaKnown RBP12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 HERC2P3Q9BVR0 1158 aa12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 RHOBTB2Q9BYZ6 727 aa12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 CSRNP2Q9H175 543 aa12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 MINDY3Q9H8M7 445 aa12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 PLA2G2EQ9NZK7 142 aa12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 FBXL21Q9UKT6 434 aa12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 PRG3Q9Y2Y8 225 aaPredicted RBP12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 IPPQ9Y573 584 aa12.36□□□□□ -0.43
UBE2D3-211ENST00000502404 WDFY4Q6ZS81 3184 aa12.35□□□□□ -0.43
UBE2D3-211ENST00000502404 MYO10Q9HD67 2058 aa12.35□□□□□ -0.43
UBE2D3-211ENST00000502404 ARL5CA6NH57 179 aa12.35□□□□□ -0.43
UBE2D3-211ENST00000502404 C2CD2LO14523 706 aa12.35□□□□□ -0.43
UBE2D3-211ENST00000502404 INPPL1O15357 1258 aa12.35□□□□□ -0.43
UBE2D3-211ENST00000502404 TSPAN1O60635 241 aa12.35□□□□□ -0.43
UBE2D3-211ENST00000502404 SLITRK3O94933 977 aa12.35□□□□□ -0.43
UBE2D3-211ENST00000502404 GLUD1P00367 558 aa12.35□□□□□ -0.43
UBE2D3-211ENST00000502404 PDGFBP01127 241 aaPredicted RBP12.35□□□□□ -0.43
UBE2D3-211ENST00000502404 KANK3Q6NY19 840 aa12.35□□□□□ -0.43
UBE2D3-211ENST00000502404 COLGALT2Q8IYK4 626 aa12.35□□□□□ -0.43
UBE2D3-211ENST00000502404 LRRN4Q8WUT4 740 aa12.35□□□□□ -0.43
UBE2D3-211ENST00000502404 GAD1Q99259 594 aa12.35□□□□□ -0.43
UBE2D3-211ENST00000502404 RTP3Q9BQQ7 232 aa12.35□□□□□ -0.43
UBE2D3-211ENST00000502404 VN1R3Q9BXE9 311 aa12.35□□□□□ -0.43
UBE2D3-211ENST00000502404 NFKBIZQ9BYH8 718 aa12.35□□□□□ -0.43
UBE2D3-211ENST00000502404 PLEKHA4Q9H4M7 779 aa12.35□□□□□ -0.43
UBE2D3-211ENST00000502404 MAN1C1Q9NR34 630 aa12.35□□□□□ -0.43
UBE2D3-211ENST00000502404 WRAP73Q9P2S5 460 aaPredicted RBP12.35□□□□□ -0.43
UBE2D3-211ENST00000502404 CCDC195A0A1B0GUA6 201 aa12.34□□□□□ -0.43
UBE2D3-211ENST00000502404 PROB1E7EW31 1015 aa12.34□□□□□ -0.43
UBE2D3-211ENST00000502404 NEMFO60524 1076 aa12.34□□□□□ -0.43
UBE2D3-211ENST00000502404 F12P00748 615 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-211ENST00000502404 CCNYL3P0C7X3 344 aa12.34□□□□□ -0.43
UBE2D3-211ENST00000502404 RFX1P22670 979 aa12.34□□□□□ -0.43
UBE2D3-211ENST00000502404 GGCXP38435 758 aa12.34□□□□□ -0.43
UBE2D3-211ENST00000502404 MLH1P40692 756 aa12.34□□□□□ -0.43
UBE2D3-211ENST00000502404 AFF1P51825 1210 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-211ENST00000502404 USP41Q3LFD5 358 aa12.34□□□□□ -0.43
UBE2D3-211ENST00000502404 SLC27A1Q6PCB7 646 aa12.34□□□□□ -0.43
UBE2D3-211ENST00000502404 SMG8Q8ND04 991 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-211ENST00000502404 FLCNQ8NFG4 579 aa12.34□□□□□ -0.43
UBE2D3-211ENST00000502404 HSD17B14Q9BPX1 270 aa12.34□□□□□ -0.43
UBE2D3-211ENST00000502404 TTC12Q9H892 705 aaPredicted RBP12.34□□□□□ -0.43
UBE2D3-211ENST00000502404 KCNK12Q9HB15 430 aa12.34□□□□□ -0.43
UBE2D3-211ENST00000502404 PIDD1Q9HB75 910 aa12.34□□□□□ -0.43
UBE2D3-211ENST00000502404 RXFP1Q9HBX9 757 aa12.34□□□□□ -0.43
UBE2D3-211ENST00000502404 FAM86C1Q9NVL1 165 aa12.34□□□□□ -0.43
UBE2D3-211ENST00000502404 TPCN1Q9ULQ1 816 aa12.34□□□□□ -0.43
UBE2D3-211ENST00000502404 ZMYM2Q9UBW7 1377 aa12.33□□□□□ -0.44
UBE2D3-211ENST00000502404 TEX28O15482 410 aa12.33□□□□□ -0.44
UBE2D3-211ENST00000502404 B4GALT3O60512 393 aa12.33□□□□□ -0.44
UBE2D3-211ENST00000502404 TADA2AO75478 443 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms