RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 RRP1BQ14684 758 aaKnown RBP3.83□□□□□ -1.8
RIF1-212ENST00000498041 NRN1LQ496H8 165 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 DCAF17Q5H9S7 520 aaPredicted RBP3.83□□□□□ -1.8
RIF1-212ENST00000498041 FAM47AQ5JRC9 791 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 EFCAB2Q5VUJ9 269 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 RNF207Q6ZRF8 634 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 Q6ZRM9 215 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 HTR3DQ70Z44 454 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 C1orf210Q8IVY1 113 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 TRMT2AQ8IZ69 625 aaKnown RBP3.83□□□□□ -1.8
RIF1-212ENST00000498041 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.83□□□□□ -1.8
RIF1-212ENST00000498041 NRG4Q8WWG1 115 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 HOXB13Q92826 284 aaPredicted RBP3.83□□□□□ -1.8
RIF1-212ENST00000498041 EXTL1Q92935 676 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 TEKT5Q96M29 485 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 MNTQ99583 582 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 LSM14BQ9BX40 385 aaKnown RBP3.83□□□□□ -1.8
RIF1-212ENST00000498041 GPR87Q9BY21 358 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 SLITRK6Q9H5Y7 841 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 LANCL2Q9NS86 450 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 DDX56Q9NY93 547 aaKnown RBP3.83□□□□□ -1.8
RIF1-212ENST00000498041 TUBD1Q9UJT1 453 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 XDHP47989 1333 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 KLRG2A4D1S0 409 aaPredicted RBP3.82□□□□□ -1.8
RIF1-212ENST00000498041 TBKBP1A7MCY6 615 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 PRR5-ARHGAP8B1AHC4 643 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 PLSCR1O15162 318 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 ADCY6O43306 1168 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 FZD7O75084 574 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 PDGFRBP09619 1106 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 IL2RBP14784 551 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 HK1P19367 917 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 PTH1RQ03431 593 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 SP140Q13342 867 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 SEPT2Q15019 361 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 MFSD14BQ5SR56 506 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 C1QL3Q5VWW1 255 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 NAIF1Q69YI7 327 aaPredicted RBP3.82□□□□□ -1.8
RIF1-212ENST00000498041 GPRIN1Q7Z2K8 1008 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 ZNF572Q7Z3I7 529 aaPredicted RBP3.82□□□□□ -1.8
RIF1-212ENST00000498041 XYLT1Q86Y38 959 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 TMPRSS6Q8IU80 811 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 REPS2Q8NFH8 660 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 OR52N2Q8NGI0 321 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 IL17DQ8TAD2 202 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 CHMP4CQ96CF2 233 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 CYFIP2Q96F07 1278 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 CEP95Q96GE4 821 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 CEP89Q96ST8 783 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 C7orf25Q9BPX7 421 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 ZNF341Q9BYN7 854 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 SENP6Q9GZR1 1112 aaPredicted RBP3.82□□□□□ -1.8
RIF1-212ENST00000498041 ZNF703Q9H7S9 590 aaPredicted RBP3.82□□□□□ -1.8
RIF1-212ENST00000498041 MANSC1Q9H8J5 431 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 MOCS1Q9NZB8 636 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 ING1Q9UK53 422 aaPredicted RBP3.82□□□□□ -1.8
RIF1-212ENST00000498041 INTUQ9ULD6 942 aa3.82□□□□□ -1.8
RIF1-212ENST00000498041 CYR61O00622 381 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 PJA2O43164 708 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 SNUPNO95149 360 aaKnown RBP3.81□□□□□ -1.8
RIF1-212ENST00000498041 ALOX15P16050 662 aaPredicted RBP3.81□□□□□ -1.8
RIF1-212ENST00000498041 GUCY1A2P33402 732 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 RECQLP46063 649 aaPredicted RBP3.81□□□□□ -1.8
RIF1-212ENST00000498041 SLC6A9P48067 706 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 KIF23Q02241 960 aaPredicted RBP3.81□□□□□ -1.8
RIF1-212ENST00000498041 KLF10Q13118 480 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 FOXE3Q13461 319 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 ODF1Q14990 250 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 VPS72Q15906 364 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 BMT2Q1RMZ1 405 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 ANKS6Q68DC2 871 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 DRICH1Q6PGQ1 229 aaPredicted RBP3.81□□□□□ -1.8
RIF1-212ENST00000498041 MIGA2Q7L4E1 593 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 ZBTB46Q86UZ6 589 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 OR2I1PQ8NGU4 316 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 ZFP28Q8NHY6 868 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 STAG1Q8WVM7 1258 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 CASKIN2Q8WXE0 1202 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 DPF2Q92785 391 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 HDAC10Q969S8 669 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 COA7Q96BR5 231 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 PGBD4Q96DM1 585 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 ZNF747Q9BV97 191 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 CPEB1Q9BZB8 566 aaKnown RBP3.81□□□□□ -1.8
RIF1-212ENST00000498041 KCNH6Q9H252 994 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 SPON1Q9HCB6 807 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 TMEM140Q9NV12 185 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 PARPBPQ9NWS1 579 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 SIK3Q9Y2K2 1263 aa3.81□□□□□ -1.8
RIF1-212ENST00000498041 ATRNL1Q5VV63 1379 aa3.8□□□□□ -1.8
RIF1-212ENST00000498041 CXorf49A8MYA2 514 aaPredicted RBP3.8□□□□□ -1.8
RIF1-212ENST00000498041 TEX33O43247 280 aa3.8□□□□□ -1.8
RIF1-212ENST00000498041 SNRPA1P09661 255 aaKnown RBP3.8□□□□□ -1.8
RIF1-212ENST00000498041 MGAT1P26572 445 aa3.8□□□□□ -1.8
RIF1-212ENST00000498041 NEK2P51955 445 aa3.8□□□□□ -1.8
RIF1-212ENST00000498041 ADKP55263 362 aaKnown RBP3.8□□□□□ -1.8
RIF1-212ENST00000498041 CLRN1P58418 232 aa3.8□□□□□ -1.8
RIF1-212ENST00000498041 RRP12Q5JTH9 1297 aaKnown RBP3.8□□□□□ -1.8
RIF1-212ENST00000498041 AFMIDQ63HM1 303 aa3.8□□□□□ -1.8
RIF1-212ENST00000498041 EFCAB12Q6NXP0 572 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms