RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 KIAA0319Q5VV43 1072 aa12.99□□□□□ -0.33
NUDCD3-211ENST00000497978 C15orf39Q6ZRI6 1047 aa12.99□□□□□ -0.33
NUDCD3-211ENST00000497978 OTOP3Q7RTS5 596 aa12.99□□□□□ -0.33
NUDCD3-211ENST00000497978 TAS1R1Q7RTX1 841 aa12.99□□□□□ -0.33
NUDCD3-211ENST00000497978 RNF168Q8IYW5 571 aaPredicted RBP12.99□□□□□ -0.33
NUDCD3-211ENST00000497978 IFT74Q96LB3 600 aa12.99□□□□□ -0.33
NUDCD3-211ENST00000497978 RXFP1Q9HBX9 757 aa12.99□□□□□ -0.33
NUDCD3-211ENST00000497978 MAN1C1Q9NR34 630 aa12.99□□□□□ -0.33
NUDCD3-211ENST00000497978 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.99□□□□□ -0.33
NUDCD3-211ENST00000497978 LRWD1Q9UFC0 647 aa12.99□□□□□ -0.33
NUDCD3-211ENST00000497978 TADA2AO75478 443 aa12.98□□□□□ -0.33
NUDCD3-211ENST00000497978 EFEMP2O95967 443 aa12.98□□□□□ -0.33
NUDCD3-211ENST00000497978 PRKCBP05771 671 aa12.98□□□□□ -0.33
NUDCD3-211ENST00000497978 LIG1P18858 919 aa12.98□□□□□ -0.33
NUDCD3-211ENST00000497978 EFNA5P52803 228 aa12.98□□□□□ -0.33
NUDCD3-211ENST00000497978 PDIA5Q14554 519 aa12.98□□□□□ -0.33
NUDCD3-211ENST00000497978 FUT10Q6P4F1 479 aa12.98□□□□□ -0.33
NUDCD3-211ENST00000497978 CYP26C1Q6V0L0 522 aa12.98□□□□□ -0.33
NUDCD3-211ENST00000497978 APBB1IPQ7Z5R6 666 aaPredicted RBP12.98□□□□□ -0.33
NUDCD3-211ENST00000497978 GPR65Q8IYL9 337 aa12.98□□□□□ -0.33
NUDCD3-211ENST00000497978 GSTCDQ8NEC7 633 aa12.98□□□□□ -0.33
NUDCD3-211ENST00000497978 CMASQ8NFW8 434 aaPredicted RBP12.98□□□□□ -0.33
NUDCD3-211ENST00000497978 BSNDQ8WZ55 320 aa12.98□□□□□ -0.33
NUDCD3-211ENST00000497978 KIFAP3Q92845 792 aa12.98□□□□□ -0.33
NUDCD3-211ENST00000497978 CHST7Q9NS84 486 aa12.98□□□□□ -0.33
NUDCD3-211ENST00000497978 ADAM28Q9UKQ2 775 aa12.98□□□□□ -0.33
NUDCD3-211ENST00000497978 KIF3AQ9Y496 699 aa12.98□□□□□ -0.33
NUDCD3-211ENST00000497978 MYO10Q9HD67 2058 aa12.98□□□□□ -0.33
NUDCD3-211ENST00000497978 SF3B1O75533 1304 aaKnown RBP eCLIP12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 CCDC195A0A1B0GUA6 201 aa12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 F8W810 466 aa12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 ACKR2O00590 384 aa12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 BRD1O95696 1058 aa12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 C1RP00736 705 aa12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 THP07101 528 aa12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 ASGR2P07307 311 aa12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 U2AF2P26368 475 aaKnown RBP eCLIP12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 AVPR2P30518 371 aa12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 MRE11P49959 708 aa12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 TUSC3Q13454 348 aa12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 HSP90AA2PQ14568 343 aaPredicted RBP12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 IER5LQ5T953 404 aa12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 C4orf32Q8N8J7 132 aa12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 PRSS33Q8NF86 280 aa12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 HDAC7Q8WUI4 952 aa12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 RIN2Q8WYP3 895 aaPredicted RBP12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 STAMQ92783 540 aa12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 GPR62Q9BZJ7 368 aa12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 IRF2BPLQ9H1B7 796 aa12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 BHMT2Q9H2M3 363 aa12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 PLEKHA4Q9H4M7 779 aa12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 PDZD7Q9H5P4 517 aa12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 FNIP2Q9P278 1114 aa12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 KIAA1024Q9UPX6 916 aa12.97□□□□□ -0.33
NUDCD3-211ENST00000497978 LAD1O00515 517 aa12.96□□□□□ -0.33
NUDCD3-211ENST00000497978 RECQL4O94761 1208 aa12.96□□□□□ -0.33
NUDCD3-211ENST00000497978 VCPP55072 806 aaKnown RBP12.96□□□□□ -0.33
NUDCD3-211ENST00000497978 PTGDRQ13258 359 aa12.96□□□□□ -0.33
NUDCD3-211ENST00000497978 NBR1Q14596 966 aa12.96□□□□□ -0.33
NUDCD3-211ENST00000497978 DCAF4L1Q3SXM0 396 aa12.96□□□□□ -0.33
NUDCD3-211ENST00000497978 KRT79Q5XKE5 535 aa12.96□□□□□ -0.33
NUDCD3-211ENST00000497978 PALB2Q86YC2 1186 aa12.96□□□□□ -0.33
NUDCD3-211ENST00000497978 SNX29Q8TEQ0 813 aa12.96□□□□□ -0.33
NUDCD3-211ENST00000497978 RABGGTAQ92696 567 aa12.96□□□□□ -0.33
NUDCD3-211ENST00000497978 KIF2CQ99661 725 aa12.96□□□□□ -0.33
NUDCD3-211ENST00000497978 RHOBTB2Q9BYZ6 727 aa12.96□□□□□ -0.33
NUDCD3-211ENST00000497978 CCDC113Q9H0I3 377 aa12.96□□□□□ -0.33
NUDCD3-211ENST00000497978 MFSD1Q9H3U5 465 aa12.96□□□□□ -0.33
NUDCD3-211ENST00000497978 PIDD1Q9HB75 910 aa12.96□□□□□ -0.33
NUDCD3-211ENST00000497978 DDX19AQ9NUU7 478 aaKnown RBP12.96□□□□□ -0.33
NUDCD3-211ENST00000497978 SNTG2Q9NY99 539 aa12.96□□□□□ -0.33
NUDCD3-211ENST00000497978 DNM3Q9UQ16 869 aa12.96□□□□□ -0.33
NUDCD3-211ENST00000497978 DENND4AQ7Z401 1863 aa12.95□□□□□ -0.34
NUDCD3-211ENST00000497978 CASTOR2A6NHX0 329 aa12.95□□□□□ -0.34
NUDCD3-211ENST00000497978 K7ERI5 159 aa12.95□□□□□ -0.34
NUDCD3-211ENST00000497978 ST18O60284 1047 aa12.95□□□□□ -0.34
NUDCD3-211ENST00000497978 SPATA31D3P0C874 917 aa12.95□□□□□ -0.34
NUDCD3-211ENST00000497978 ELAVL2Q12926 359 aaKnown RBP12.95□□□□□ -0.34
NUDCD3-211ENST00000497978 RABEP1Q15276 862 aa12.95□□□□□ -0.34
NUDCD3-211ENST00000497978 ECM1Q16610 540 aa12.95□□□□□ -0.34
NUDCD3-211ENST00000497978 C8orf34Q49A92 452 aa12.95□□□□□ -0.34
NUDCD3-211ENST00000497978 SPATA31D4Q6ZUB0 917 aa12.95□□□□□ -0.34
NUDCD3-211ENST00000497978 GLYCTKQ8IVS8 523 aa12.95□□□□□ -0.34
NUDCD3-211ENST00000497978 IGSF22Q8N9C0 903 aa12.95□□□□□ -0.34
NUDCD3-211ENST00000497978 SMG7Q92540 1137 aaKnown RBP12.95□□□□□ -0.34
NUDCD3-211ENST00000497978 B3GALT6Q96L58 329 aa12.95□□□□□ -0.34
NUDCD3-211ENST00000497978 WDR6Q9NNW5 1121 aaKnown RBP12.95□□□□□ -0.34
NUDCD3-211ENST00000497978 ZDHHC7Q9NXF8 308 aa12.95□□□□□ -0.34
NUDCD3-211ENST00000497978 PCDHB6Q9Y5E3 794 aa12.95□□□□□ -0.34
NUDCD3-211ENST00000497978 PLXNA3P51805 1871 aa12.95□□□□□ -0.34
NUDCD3-211ENST00000497978 KMT2EQ8IZD2 1858 aa12.95□□□□□ -0.34
NUDCD3-211ENST00000497978 C2orf16Q68DN1 1984 aa12.94□□□□□ -0.34
NUDCD3-211ENST00000497978 CLUHO75153 1309 aa12.94□□□□□ -0.34
NUDCD3-211ENST00000497978 PHLPP2Q6ZVD8 1323 aa12.94□□□□□ -0.34
NUDCD3-211ENST00000497978 CCDC169A6NNP5 214 aa12.94□□□□□ -0.34
NUDCD3-211ENST00000497978 PTGESO14684 152 aa12.94□□□□□ -0.34
NUDCD3-211ENST00000497978 TGM5O43548 720 aa12.94□□□□□ -0.34
NUDCD3-211ENST00000497978 RFPL2O75678 378 aa12.94□□□□□ -0.34
NUDCD3-211ENST00000497978 PDGFBP01127 241 aaPredicted RBP12.94□□□□□ -0.34
NUDCD3-211ENST00000497978 MYBP10242 640 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms