RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	ANKMY2	Q8IV38	441 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	ST13P4	Q8IZP2	240 aa	Predicted RBP	11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	EIF1AD	Q8N9N8	165 aa	Known RBP	11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	ZNF333	Q96JL9	665 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	CLPTM1L	Q96KA5	538 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	CEP63	Q96MT8	703 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	PHACTR1	Q9C0D0	580 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	FAM13A	O94988	1023 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	GNAZ	P19086	355 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	RASA1	P20936	1047 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	SERPINB6	P35237	376 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	ZNF76	P36508	570 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	CNPY1	Q3B7I2	92 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	SYCP2L	Q5T4T6	812 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	ANKLE1	Q8NAG6	615 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	TUBGCP5	Q96RT8	1024 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	FNBP1	Q96RU3	617 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	RIOK1	Q9BRS2	568 aa	Known RBP	11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	PPARGC1A	Q9UBK2	798 aa	Known RBP	11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	ANAPC4	Q9UJX5	808 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597		B2RBV5	119 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	CALU	O43852	315 aa	Predicted RBP	11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	CDH16	O75309	829 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	RTP1	P59025	263 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	IRX4	P78413	519 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	PICALM	Q13492	652 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	DDB1	Q16531	1140 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	CGB2	Q6NT52	195 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	RGS9BP	Q6ZS82	235 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	MAP7D3	Q8IWC1	876 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	PPM1K	Q8N3J5	372 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	LRMDA	Q9H2I8	198 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	NDE1	Q9NXR1	346 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	ZNF232	Q9UNY5	417 aa		11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	11.31	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	MYH4	Q9Y623	1939 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	CCDC195	A0A1B0GUA6	201 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	PTPN4	P29074	926 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	SOX5	P35711	763 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	WDR4	P57081	412 aa	Known RBP	11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	SLC34A1	Q06495	639 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	LBR	Q14739	615 aa	Known RBP	11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	PKN2	Q16513	984 aa	Known RBP	11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	EPC2	Q52LR7	807 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	ASRGL1	Q7L266	308 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	WDR60	Q8WVS4	1066 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	SERPINB12	Q96P63	405 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	CYP4F11	Q9HBI6	524 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	CHST7	Q9NS84	486 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	ARL8B	Q9NVJ2	186 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	LARS	Q9P2J5	1176 aa	Known RBP	11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	MYO3B	Q8WXR4	1341 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	USP17L5	A8MUK1	530 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	DDX3Y	O15523	660 aa	Known RBP	11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	ZNF189	O75820	626 aa	Predicted RBP	11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	CALCA	P01258	141 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	CETP	P11597	493 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	ARFIP2	P53365	341 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	PRR16	Q569H4	304 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	SUSD4	Q5VX71	490 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	BTNL9	Q6UXG8	535 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	BSDC1	Q9NW68	430 aa	Predicted RBP	11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	MAD2L2	Q9UI95	211 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	COG5	Q9UP83	839 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	ECM29	Q5VYK3	1845 aa		11.3	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	USP17L15	C9J2P7	530 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	USP17L13	C9JLJ4	530 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	USP17L11	C9JVI0	530 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	USP17L18	D6R9N7	530 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	USP17L22	D6RA61	530 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	USP17L17	D6RBQ6	530 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	USP17L19	D6RCP7	530 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	USP17L20	D6RJB6	530 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	OR6B1	O95007	311 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	PSMG1	O95456	288 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	TTC4	O95801	387 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	LMNA	P02545	664 aa	Known RBP	11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	ATF7	P17544	494 aa	Predicted RBP	11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	KLRK1	P26718	216 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	RPA3	P35244	121 aa	Predicted RBP	11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	USP17L24	Q0WX57	530 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	IZUMO3	Q5VZ72	239 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	CCDC174	Q6PII3	467 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	USP17L6P	Q6QN14	398 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	C4orf50	Q6ZRC1	276 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	SLC13A5	Q86YT5	568 aa	Predicted RBP	11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	TRIM42	Q8IWZ5	723 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	RASGEF1C	Q8N431	466 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	RAB3IL1	Q8TBN0	382 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	SLC5A5	Q92911	643 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	ERLEC1	Q96DZ1	483 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	EYA3	Q99504	573 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	ZNF184	Q99676	751 aa	Predicted RBP	11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	BHMT2	Q9H2M3	363 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	IL17RB	Q9NRM6	502 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	NINJ2	Q9NZG7	142 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	FOXN3	O00409	490 aa	Predicted RBP	11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	CCDC22	O60826	627 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	LYN	P07948	512 aa		11.29	□□□□□ -0.6
TRAPPC12-223	ENST00000497597	GSTA2	P09210	222 aa		11.29	□□□□□ -0.6

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