RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 SPPL3Q8TCT6 385 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 DHX58Q96C10 678 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 HVCN1Q96D96 273 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 DNAJC19Q96DA6 116 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 FAM193BQ96PV7 902 aaPredicted RBP12.57□□□□□ -0.4
HLA-B-254ENST00000497377 TMEM175Q9BSA9 504 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 TARS2Q9BW92 718 aaKnown RBP12.57□□□□□ -0.4
HLA-B-254ENST00000497377 PTPRHQ9HD43 1115 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 OLFML3Q9NRN5 406 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 STK39Q9UEW8 545 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 USP25Q9UHP3 1055 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 PUF60Q9UHX1 559 aaKnown RBP12.57□□□□□ -0.4
HLA-B-254ENST00000497377 KCNH3Q9ULD8 1083 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 HES2Q9Y543 173 aa12.57□□□□□ -0.4
HLA-B-254ENST00000497377 FRMD3A2A2Y4 597 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 GRM6O15303 877 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 ZC3H11AO75152 810 aaKnown RBP eCLIP12.56□□□□□ -0.44e-6■■□□□ 13.4
HLA-B-254ENST00000497377 PIGRP01833 764 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 MCF2P10911 925 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 PROZP22891 400 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 MLH1P40692 756 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 GRM5P41594 1212 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 BCAR1P56945 870 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 GTF2BQ00403 316 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 ALCAMQ13740 583 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 DMRTA1Q5VZB9 504 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 EEF1DP3Q658K8 133 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 PPP2R3CQ969Q6 453 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 BICD1Q96G01 975 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 RPS6KC1Q96S38 1066 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 FIZ1Q96SL8 496 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 GAD1Q99259 594 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 TCHPQ9BT92 498 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 CCDC94Q9BW85 323 aaPredicted RBP12.56□□□□□ -0.4
HLA-B-254ENST00000497377 APOL6Q9BWW8 343 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 CDT1Q9H211 546 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 NRDE2Q9H7Z3 1164 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 ALG13Q9NP73 1137 aaKnown RBP12.56□□□□□ -0.4
HLA-B-254ENST00000497377 TOPORSQ9NS56 1045 aaPredicted RBP12.56□□□□□ -0.4
HLA-B-254ENST00000497377 HCSTQ9UBK5 93 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 PARP2Q9UGN5 583 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 TBX20Q9UMR3 447 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 PRUNE2Q8WUY3 3088 aa12.56□□□□□ -0.4
HLA-B-254ENST00000497377 PLXNA4Q9HCM2 1894 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 A0A1W2PQ27 194 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 A0A1W2PQ64 194 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 A0A1W2PQD8 194 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 TK2O00142 265 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 CLDN3O15551 220 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 NR1I2O75469 434 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 RECQL4O94761 1208 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 ALDH2P05091 517 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 SLFN14P0C7P3 912 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 IDEP14735 1019 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 AKAP5P24588 427 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 LIG4P49917 911 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 YARSP54577 528 aaKnown RBP12.55□□□□□ -0.4
HLA-B-254ENST00000497377 GRIK3Q13003 919 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 NOLC1Q14978 699 aaKnown RBP eCLIP12.55□□□□□ -0.43e-7■■■■□ 22.1
HLA-B-254ENST00000497377 KYAT1Q16773 422 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 HERC4Q5GLZ8 1057 aaPredicted RBP12.55□□□□□ -0.4
HLA-B-254ENST00000497377 ZNF720Q7Z2F6 126 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 SFR1Q86XK3 245 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 MAP4K3Q8IVH8 894 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 CEP57L1Q8IYX8 460 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 SLC39A11Q8N1S5 342 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 MICALL1Q8N3F8 863 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 ZNF454Q8N9F8 522 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 POF1BQ8WVV4 589 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 MRPS27Q92552 414 aaKnown RBP12.55□□□□□ -0.4
HLA-B-254ENST00000497377 DDX27Q96GQ7 796 aaKnown RBP12.55□□□□□ -0.4
HLA-B-254ENST00000497377 TMEM169Q96HH4 297 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 KCNK17Q96T54 332 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 TRIM9Q9C026 710 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 NSUN3Q9H649 340 aaKnown RBP12.55□□□□□ -0.4
HLA-B-254ENST00000497377 MRPL44Q9H9J2 332 aaKnown RBP12.55□□□□□ -0.4
HLA-B-254ENST00000497377 TLR9Q9NR96 1032 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 PANK4Q9NVE7 773 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 SNTG2Q9NY99 539 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 USP20Q9Y2K6 914 aa12.55□□□□□ -0.4
HLA-B-254ENST00000497377 REV3LO60673 3130 aa12.54□□□□□ -0.4
HLA-B-254ENST00000497377 FAM237AA0A1B0GTK4 181 aa12.54□□□□□ -0.4
HLA-B-254ENST00000497377 FSD2A1L4K1 749 aa12.54□□□□□ -0.4
HLA-B-254ENST00000497377 ABLIM1O14639 778 aa12.54□□□□□ -0.4
HLA-B-254ENST00000497377 HNRNPDLO14979 420 aaKnown RBP12.54□□□□□ -0.4
HLA-B-254ENST00000497377 NCK2O43639 380 aa12.54□□□□□ -0.4
HLA-B-254ENST00000497377 DDHD2O94830 711 aa12.54□□□□□ -0.4
HLA-B-254ENST00000497377 POMCP01189 267 aa12.54□□□□□ -0.4
HLA-B-254ENST00000497377 GALTP07902 379 aa12.54□□□□□ -0.4
HLA-B-254ENST00000497377 PFKFB1P16118 471 aa12.54□□□□□ -0.4
HLA-B-254ENST00000497377 SCNN1GP51170 649 aa12.54□□□□□ -0.4
HLA-B-254ENST00000497377 AFF1P51825 1210 aaKnown RBP12.54□□□□□ -0.4
HLA-B-254ENST00000497377 MCL1Q07820 350 aa12.54□□□□□ -0.4
HLA-B-254ENST00000497377 DSC1Q08554 894 aa12.54□□□□□ -0.4
HLA-B-254ENST00000497377 BMS1Q14692 1282 aaKnown RBP12.54□□□□□ -0.4
HLA-B-254ENST00000497377 CCDC85BQ15834 202 aaPredicted RBP12.54□□□□□ -0.4
HLA-B-254ENST00000497377 STXBP4Q6ZWJ1 553 aa12.54□□□□□ -0.4
HLA-B-254ENST00000497377 COLGALT2Q8IYK4 626 aa12.54□□□□□ -0.4
HLA-B-254ENST00000497377 ZFP42Q96MM3 310 aa12.54□□□□□ -0.4
HLA-B-254ENST00000497377 C7orf25Q9BPX7 421 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 250 ms