RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 TET1Q8NFU7 2136 aa19.89■□□□□ 0.77
RGP1-202ENST00000496906 LINC01599Q8WXQ3 324 aa19.89■□□□□ 0.77
RGP1-202ENST00000496906 NXF3Q9H4D5 531 aaKnown RBP19.89■□□□□ 0.77
RGP1-202ENST00000496906 PCDH10Q9P2E7 1040 aa19.89■□□□□ 0.77
RGP1-202ENST00000496906 MAGEC2Q9UBF1 373 aaPredicted RBP19.89■□□□□ 0.77
RGP1-202ENST00000496906 CLTAP09496 248 aa19.88■□□□□ 0.77
RGP1-202ENST00000496906 CSF2RAP15509 400 aa19.88■□□□□ 0.77
RGP1-202ENST00000496906 RGS19P49795 217 aa19.88■□□□□ 0.77
RGP1-202ENST00000496906 OSTNP61366 133 aa19.88■□□□□ 0.77
RGP1-202ENST00000496906 GSE1Q14687 1217 aa19.88■□□□□ 0.77
RGP1-202ENST00000496906 RTN4RL1Q86UN2 441 aaPredicted RBP19.88■□□□□ 0.77
RGP1-202ENST00000496906 BRSK2Q8IWQ3 736 aa19.88■□□□□ 0.77
RGP1-202ENST00000496906 SMG8Q8ND04 991 aaKnown RBP19.88■□□□□ 0.77
RGP1-202ENST00000496906 MFSD14AQ96MC6 490 aa19.88■□□□□ 0.77
RGP1-202ENST00000496906 TSPYL2Q9H2G4 693 aaPredicted RBP19.88■□□□□ 0.77
RGP1-202ENST00000496906 METTL14Q9HCE5 456 aaKnown RBP19.88■□□□□ 0.77
RGP1-202ENST00000496906 RGS18Q9NS28 235 aa19.88■□□□□ 0.77
RGP1-202ENST00000496906 ARMCX3Q9UH62 379 aaPredicted RBP19.88■□□□□ 0.77
RGP1-202ENST00000496906 HES2Q9Y543 173 aa19.88■□□□□ 0.77
RGP1-202ENST00000496906 IPPQ9Y573 584 aa19.88■□□□□ 0.77
RGP1-202ENST00000496906 PCDHB2Q9Y5E7 798 aa19.88■□□□□ 0.77
RGP1-202ENST00000496906 A0A0U1RQF3 1178 aa19.87■□□□□ 0.77
RGP1-202ENST00000496906 GOLGA6L3A6NEY3 463 aa19.87■□□□□ 0.77
RGP1-202ENST00000496906 CDK11BP21127 795 aaKnown RBP19.87■□□□□ 0.77
RGP1-202ENST00000496906 RAB27AP51159 221 aa19.87■□□□□ 0.77
RGP1-202ENST00000496906 POU5F1Q01860 360 aaKnown RBP19.87■□□□□ 0.77
RGP1-202ENST00000496906 CYP24A1Q07973 514 aa19.87■□□□□ 0.77
RGP1-202ENST00000496906 UVSSAQ2YD98 709 aa19.87■□□□□ 0.77
RGP1-202ENST00000496906 INTS8Q75QN2 995 aaKnown RBP19.87■□□□□ 0.77
RGP1-202ENST00000496906 CREBRFQ8IUR6 639 aa19.87■□□□□ 0.77
RGP1-202ENST00000496906 TRIM59Q8IWR1 403 aa19.87■□□□□ 0.77
RGP1-202ENST00000496906 SNTG2Q9NY99 539 aa19.87■□□□□ 0.77
RGP1-202ENST00000496906 RBAKQ9NYW8 714 aaPredicted RBP19.87■□□□□ 0.77
RGP1-202ENST00000496906 LIMA1Q9UHB6 759 aaKnown RBP19.87■□□□□ 0.77
RGP1-202ENST00000496906 ZNF623O75123 536 aa19.87■□□□□ 0.77
RGP1-202ENST00000496906 MCCD1P59942 119 aaPredicted RBP19.87■□□□□ 0.77
RGP1-202ENST00000496906 BFSP1Q12934 665 aa19.87■□□□□ 0.77
RGP1-202ENST00000496906 KRT31Q15323 416 aa19.87■□□□□ 0.77
RGP1-202ENST00000496906 ENOX2Q16206 610 aaKnown RBP19.87■□□□□ 0.77
RGP1-202ENST00000496906 CNKSR3Q6P9H4 555 aa19.87■□□□□ 0.77
RGP1-202ENST00000496906 APTXQ7Z2E3 356 aaKnown RBP19.87■□□□□ 0.77
RGP1-202ENST00000496906 PLEKHO2Q8TD55 490 aa19.87■□□□□ 0.77
RGP1-202ENST00000496906 CCDC94Q9BW85 323 aaPredicted RBP19.87■□□□□ 0.77
RGP1-202ENST00000496906 C9IYK1 514 aa19.86■□□□□ 0.77
RGP1-202ENST00000496906 MEFVO15553 781 aaPredicted RBP19.86■□□□□ 0.77
RGP1-202ENST00000496906 CAPN15O75808 1086 aa19.86■□□□□ 0.77
RGP1-202ENST00000496906 PFKMP08237 780 aa19.86■□□□□ 0.77
RGP1-202ENST00000496906 CXCL8P10145 99 aa19.86■□□□□ 0.77
RGP1-202ENST00000496906 MTIF2P46199 727 aaKnown RBP19.86■□□□□ 0.77
RGP1-202ENST00000496906 WNT7BP56706 349 aa19.86■□□□□ 0.77
RGP1-202ENST00000496906 PSMD6Q15008 389 aa19.86■□□□□ 0.77
RGP1-202ENST00000496906 SLC24A5Q71RS6 500 aa19.86■□□□□ 0.77
RGP1-202ENST00000496906 MRPL10Q7Z7H8 261 aaKnown RBP19.86■□□□□ 0.77
RGP1-202ENST00000496906 DPF3Q92784 378 aa19.86■□□□□ 0.77
RGP1-202ENST00000496906 ACAP3Q96P50 834 aa19.86■□□□□ 0.77
RGP1-202ENST00000496906 RPF1Q9H9Y2 349 aaKnown RBP19.86■□□□□ 0.77
RGP1-202ENST00000496906 C1orf112Q9NSG2 853 aa19.86■□□□□ 0.77
RGP1-202ENST00000496906 LRRC10BA6NIK2 292 aa19.85■□□□□ 0.77
RGP1-202ENST00000496906 SKIP12755 728 aa19.85■□□□□ 0.77
RGP1-202ENST00000496906 KRT13P13646 458 aa19.85■□□□□ 0.77
RGP1-202ENST00000496906 ATF7P17544 494 aaPredicted RBP19.85■□□□□ 0.77
RGP1-202ENST00000496906 VAMP7P51809 220 aa19.85■□□□□ 0.77
RGP1-202ENST00000496906 ENPEPQ07075 957 aa19.85■□□□□ 0.77
RGP1-202ENST00000496906 RPUSD2Q8IZ73 545 aaKnown RBP19.85■□□□□ 0.77
RGP1-202ENST00000496906 ANKRD20A12PQ8NF67 263 aa19.85■□□□□ 0.77
RGP1-202ENST00000496906 PARD3BQ8TEW8 1205 aa19.85■□□□□ 0.77
RGP1-202ENST00000496906 BADQ92934 168 aa19.85■□□□□ 0.77
RGP1-202ENST00000496906 TUBGCP2Q9BSJ2 902 aa19.85■□□□□ 0.77
RGP1-202ENST00000496906 APOL6Q9BWW8 343 aa19.85■□□□□ 0.77
RGP1-202ENST00000496906 RNF39Q9H2S5 420 aa19.85■□□□□ 0.77
RGP1-202ENST00000496906 LTBP2Q14767 1821 aa19.85■□□□□ 0.77
RGP1-202ENST00000496906 ENPP3O14638 875 aa19.84■□□□□ 0.77
RGP1-202ENST00000496906 RECQL4O94761 1208 aa19.84■□□□□ 0.77
RGP1-202ENST00000496906 SYN1P17600 705 aa19.84■□□□□ 0.77
RGP1-202ENST00000496906 AKAP5P24588 427 aa19.84■□□□□ 0.77
RGP1-202ENST00000496906 FAM189BP81408 668 aa19.84■□□□□ 0.77
RGP1-202ENST00000496906 FANCCQ00597 558 aa19.84■□□□□ 0.77
RGP1-202ENST00000496906 MAN2A1Q16706 1144 aa19.84■□□□□ 0.77
RGP1-202ENST00000496906 SLC10A6Q3KNW5 377 aa19.84■□□□□ 0.77
RGP1-202ENST00000496906 DCAF17Q5H9S7 520 aaPredicted RBP19.84■□□□□ 0.77
RGP1-202ENST00000496906 ZNF598Q86UK7 904 aaKnown RBP19.84■□□□□ 0.77
RGP1-202ENST00000496906 ECHDC2Q86YB7 292 aa19.84■□□□□ 0.77
RGP1-202ENST00000496906 HACE1Q8IYU2 909 aa19.84■□□□□ 0.77
RGP1-202ENST00000496906 TMC2Q8TDI7 906 aa19.84■□□□□ 0.77
RGP1-202ENST00000496906 SLC35C1Q96A29 364 aa19.84■□□□□ 0.77
RGP1-202ENST00000496906 GRPEL1Q9HAV7 217 aa19.84■□□□□ 0.77
RGP1-202ENST00000496906 PDE11AQ9HCR9 933 aa19.84■□□□□ 0.77
RGP1-202ENST00000496906 IL23AQ9NPF7 189 aa19.84■□□□□ 0.77
RGP1-202ENST00000496906 TAB2Q9NYJ8 693 aa19.84■□□□□ 0.77
RGP1-202ENST00000496906 ZMYND8Q9ULU4 1186 aaPredicted RBP19.84■□□□□ 0.77
RGP1-202ENST00000496906 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.83■□□□□ 0.77
RGP1-202ENST00000496906 TTC26A0AVF1 554 aa19.83■□□□□ 0.77
RGP1-202ENST00000496906 PRKCSHP14314 528 aaPredicted RBP19.83■□□□□ 0.77
RGP1-202ENST00000496906 COPB1P53618 953 aaKnown RBP19.83■□□□□ 0.77
RGP1-202ENST00000496906 YARSP54577 528 aaKnown RBP19.83■□□□□ 0.77
RGP1-202ENST00000496906 DLG4P78352 724 aa19.83■□□□□ 0.77
RGP1-202ENST00000496906 FPGSQ05932 587 aa19.83■□□□□ 0.77
RGP1-202ENST00000496906 PPIGQ13427 754 aaKnown RBP eCLIP19.83■□□□□ 0.77
RGP1-202ENST00000496906 MIIPQ5JXC2 388 aa19.83■□□□□ 0.77
RGP1-202ENST00000496906 C1orf220Q5T0J3 134 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms