RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 ASPSCR1Q9BZE9 553 aa6.51□□□□□ -1.37
SNX13-211ENST00000496855 CLCA2Q9UQC9 943 aa6.51□□□□□ -1.37
SNX13-211ENST00000496855 MRFAP1Q9Y605 127 aa6.51□□□□□ -1.37
SNX13-211ENST00000496855 TBKBP1A7MCY6 615 aa6.5□□□□□ -1.37
SNX13-211ENST00000496855 FAM171A2A8MVW0 826 aa6.5□□□□□ -1.37
SNX13-211ENST00000496855 XPOTO43592 962 aaKnown RBP6.5□□□□□ -1.37
SNX13-211ENST00000496855 NDUFS2O75306 463 aa6.5□□□□□ -1.37
SNX13-211ENST00000496855 TACR2P21452 398 aa6.5□□□□□ -1.37
SNX13-211ENST00000496855 ZXDAP98168 799 aa6.5□□□□□ -1.37
SNX13-211ENST00000496855 TOB2Q14106 344 aaPredicted RBP6.5□□□□□ -1.37
SNX13-211ENST00000496855 RPUSD2Q8IZ73 545 aaKnown RBP6.5□□□□□ -1.37
SNX13-211ENST00000496855 OR2I1PQ8NGU4 316 aa6.5□□□□□ -1.37
SNX13-211ENST00000496855 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.5□□□□□ -1.37
SNX13-211ENST00000496855 ZNF341Q9BYN7 854 aa6.5□□□□□ -1.37
SNX13-211ENST00000496855 CSRNP2Q9H175 543 aa6.5□□□□□ -1.37
SNX13-211ENST00000496855 KCNH6Q9H252 994 aa6.5□□□□□ -1.37
SNX13-211ENST00000496855 TUBD1Q9UJT1 453 aa6.5□□□□□ -1.37
SNX13-211ENST00000496855 TNKSO95271 1327 aa6.5□□□□□ -1.37
SNX13-211ENST00000496855 ATRNL1Q5VV63 1379 aa6.49□□□□□ -1.37
SNX13-211ENST00000496855 GRXCR1A8MXD5 290 aa6.49□□□□□ -1.37
SNX13-211ENST00000496855 C6P13671 934 aa6.49□□□□□ -1.37
SNX13-211ENST00000496855 ALOX15P16050 662 aaPredicted RBP6.49□□□□□ -1.37
SNX13-211ENST00000496855 C5AR1P21730 350 aa6.49□□□□□ -1.37
SNX13-211ENST00000496855 WASP42768 502 aa6.49□□□□□ -1.37
SNX13-211ENST00000496855 CSRP2Q16527 193 aa6.49□□□□□ -1.37
SNX13-211ENST00000496855 PTPN21Q16825 1174 aa6.49□□□□□ -1.37
SNX13-211ENST00000496855 BMT2Q1RMZ1 405 aa6.49□□□□□ -1.37
SNX13-211ENST00000496855 BRDTQ58F21 947 aaPredicted RBP6.49□□□□□ -1.37
SNX13-211ENST00000496855 FBXO18Q8NFZ0 1043 aa6.49□□□□□ -1.37
SNX13-211ENST00000496855 NRG4Q8WWG1 115 aa6.49□□□□□ -1.37
SNX13-211ENST00000496855 DPF2Q92785 391 aa6.49□□□□□ -1.37
SNX13-211ENST00000496855 SMAD5Q99717 465 aaKnown RBP6.49□□□□□ -1.37
SNX13-211ENST00000496855 SLC13A1Q9BZW2 595 aa6.49□□□□□ -1.37
SNX13-211ENST00000496855 SPON1Q9HCB6 807 aa6.49□□□□□ -1.37
SNX13-211ENST00000496855 LANCL2Q9NS86 450 aa6.49□□□□□ -1.37
SNX13-211ENST00000496855 SIK3Q9Y2K2 1263 aa6.49□□□□□ -1.37
SNX13-211ENST00000496855 ARID4BQ4LE39 1312 aaPredicted RBP6.49□□□□□ -1.37
SNX13-211ENST00000496855 hCG_2014768A0A024R1R8 64 aa6.48□□□□□ -1.37
SNX13-211ENST00000496855 WNT10BO00744 389 aa6.48□□□□□ -1.37
SNX13-211ENST00000496855 IL2RBP14784 551 aa6.48□□□□□ -1.37
SNX13-211ENST00000496855 GUCY1A2P33402 732 aa6.48□□□□□ -1.37
SNX13-211ENST00000496855 SLC6A9P48067 706 aa6.48□□□□□ -1.37
SNX13-211ENST00000496855 SP140Q13342 867 aa6.48□□□□□ -1.37
SNX13-211ENST00000496855 RABL3Q5HYI8 236 aa6.48□□□□□ -1.37
SNX13-211ENST00000496855 DRICH1Q6PGQ1 229 aaPredicted RBP6.48□□□□□ -1.37
SNX13-211ENST00000496855 NOL8Q76FK4 1167 aaKnown RBP6.48□□□□□ -1.37
SNX13-211ENST00000496855 PNMA8AQ86V59 439 aaPredicted RBP6.48□□□□□ -1.37
SNX13-211ENST00000496855 Q8N1X5 172 aa6.48□□□□□ -1.37
SNX13-211ENST00000496855 SLC35B2Q8TB61 432 aa6.48□□□□□ -1.37
SNX13-211ENST00000496855 TEKT5Q96M29 485 aa6.48□□□□□ -1.37
SNX13-211ENST00000496855 SENP6Q9GZR1 1112 aaPredicted RBP6.48□□□□□ -1.37
SNX13-211ENST00000496855 INTUQ9ULD6 942 aa6.48□□□□□ -1.37
SNX13-211ENST00000496855 SPEF1Q9Y4P9 236 aa6.48□□□□□ -1.37
SNX13-211ENST00000496855 CXorf49A8MYA2 514 aaPredicted RBP6.47□□□□□ -1.37
SNX13-211ENST00000496855 PJA2O43164 708 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 ANAPC15P60006 121 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 SLC25A3Q00325 362 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 TUBA3CQ13748 450 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 LSM12Q3MHD2 195 aaKnown RBP6.47□□□□□ -1.37
SNX13-211ENST00000496855 EFCAB12Q6NXP0 572 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 TUBA3EQ6PEY2 450 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 TFAP2CQ92754 450 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 CYFIP2Q96F07 1278 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 C7orf25Q9BPX7 421 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 NDC1Q9BTX1 674 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 LDAHQ9H6V9 325 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 SAP30BPQ9UHR5 308 aaKnown RBP6.47□□□□□ -1.37
SNX13-211ENST00000496855 NPIPB8E9PQR5 432 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 FAM20BO75063 409 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 SNRPA1P09661 255 aaKnown RBP6.47□□□□□ -1.37
SNX13-211ENST00000496855 SLC16A1P53985 500 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 CLRN1P58418 232 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 AFMIDQ63HM1 303 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 OR10H5Q8NGA6 315 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 ZFP28Q8NHY6 868 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 CASKIN2Q8WXE0 1202 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 STON2Q8WXE9 905 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 MANSC1Q9H8J5 431 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 TMEM140Q9NV12 185 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 SLC52A1Q9NWF4 448 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 MOCS1Q9NZB8 636 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 AJAP1Q9UKB5 411 aaPredicted RBP6.47□□□□□ -1.37
SNX13-211ENST00000496855 SORCS3Q9UPU3 1222 aa6.47□□□□□ -1.37
SNX13-211ENST00000496855 TRIM24O15164 1050 aa6.46□□□□□ -1.38
SNX13-211ENST00000496855 RECQL4O94761 1208 aa6.46□□□□□ -1.38
SNX13-211ENST00000496855 PEX11BO96011 259 aa6.46□□□□□ -1.38
SNX13-211ENST00000496855 CCND1P24385 295 aa6.46□□□□□ -1.38
SNX13-211ENST00000496855 MGAT1P26572 445 aa6.46□□□□□ -1.38
SNX13-211ENST00000496855 APOBEC3AP31941 199 aaPredicted RBP6.46□□□□□ -1.38
SNX13-211ENST00000496855 EXOSC10Q01780 885 aaKnown RBP6.46□□□□□ -1.38
SNX13-211ENST00000496855 EFCAB2Q5VUJ9 269 aa6.46□□□□□ -1.38
SNX13-211ENST00000496855 SYT12Q8IV01 421 aa6.46□□□□□ -1.38
SNX13-211ENST00000496855 RNF169Q8NCN4 708 aa6.46□□□□□ -1.38
SNX13-211ENST00000496855 CCHCR1Q8TD31 782 aa6.46□□□□□ -1.38
SNX13-211ENST00000496855 POGKQ9P215 609 aa6.46□□□□□ -1.38
SNX13-211ENST00000496855 KLHL42Q9P2K6 505 aa6.46□□□□□ -1.38
SNX13-211ENST00000496855 EIF2B4Q9UI10 523 aaKnown RBP6.46□□□□□ -1.38
SNX13-211ENST00000496855 LEFTY2O00292 366 aa6.45□□□□□ -1.38
SNX13-211ENST00000496855 FZD7O75084 574 aa6.45□□□□□ -1.38
SNX13-211ENST00000496855 SCAF4O95104 1147 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms