RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 MAP4K3Q8IVH8 894 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 HELQQ8TDG4 1101 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 TRAPPC12Q8WVT3 735 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 TAF1DQ9H5J8 278 aaPredicted RBP13.24□□□□□ -0.29
PDE6B-212ENST00000496514 AS3MTQ9HBK9 375 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 KLHL11Q9NVR0 708 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 SUCLA2Q9P2R7 463 aaPredicted RBP13.24□□□□□ -0.29
PDE6B-212ENST00000496514 TMEM59LQ9UK28 342 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 KIF13BQ9NQT8 1826 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 MUTP22033 750 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 SSR1P43307 286 aaKnown RBP13.24□□□□□ -0.29
PDE6B-212ENST00000496514 VPS41P49754 854 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 EMC2Q15006 297 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 CATSPERGQ6ZRH7 1159 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 OTUD6AQ7L8S5 288 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 NIPA1Q7RTP0 329 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 SLFN11Q7Z7L1 901 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 ATP6V0A1Q93050 837 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 NT5C1BQ96P26 610 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 TSPYL1Q9H0U9 437 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 NOCTQ9UK39 431 aaKnown RBP13.24□□□□□ -0.29
PDE6B-212ENST00000496514 FZD9O00144 591 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 TULP2O00295 520 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 SRGAP2CP0DJJ0 459 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 PYGMP11217 842 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 SFNP31947 248 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 HSD17B3P37058 310 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 PLTPP55058 493 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 CYP24A1Q07973 514 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 TTLL12Q14166 644 aaPredicted RBP13.24□□□□□ -0.29
PDE6B-212ENST00000496514 UAP1Q16222 522 aaPredicted RBP13.24□□□□□ -0.29
PDE6B-212ENST00000496514 NFIL3Q16649 462 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 CHADLQ6NUI6 762 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 SYCE1Q8N0S2 351 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 FBXL13Q8NEE6 735 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 ACTRT1Q8TDG2 376 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 SLC16A10Q8TF71 515 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 FBXO40Q9UH90 709 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 TRPC6Q9Y210 931 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 CEP83Q9Y592 693 aa13.24□□□□□ -0.29
PDE6B-212ENST00000496514 DCDC2CA8MYV0 355 aa13.23□□□□□ -0.29
PDE6B-212ENST00000496514 TNFSF9P41273 254 aa13.23□□□□□ -0.29
PDE6B-212ENST00000496514 MKRN3Q13064 507 aaKnown RBP13.23□□□□□ -0.29
PDE6B-212ENST00000496514 GJC2Q5T442 439 aaPredicted RBP13.23□□□□□ -0.29
PDE6B-212ENST00000496514 ZNF564Q8TBZ8 553 aaPredicted RBP13.23□□□□□ -0.29
PDE6B-212ENST00000496514 RNF217Q8TC41 542 aa13.23□□□□□ -0.29
PDE6B-212ENST00000496514 FNBP1Q96RU3 617 aa13.23□□□□□ -0.29
PDE6B-212ENST00000496514 TCHPQ9BT92 498 aa13.23□□□□□ -0.29
PDE6B-212ENST00000496514 ATP6V0A4Q9HBG4 840 aa13.23□□□□□ -0.29
PDE6B-212ENST00000496514 CTNNA1P35221 906 aaKnown RBP13.23□□□□□ -0.29
PDE6B-212ENST00000496514 CCT5P48643 541 aa13.23□□□□□ -0.29
PDE6B-212ENST00000496514 PDE6CP51160 858 aa13.23□□□□□ -0.29
PDE6B-212ENST00000496514 GPC5P78333 572 aa13.23□□□□□ -0.29
PDE6B-212ENST00000496514 PRUNE1Q86TP1 453 aa13.23□□□□□ -0.29
PDE6B-212ENST00000496514 ATG4AQ8WYN0 398 aa13.23□□□□□ -0.29
PDE6B-212ENST00000496514 COPS5Q92905 334 aa13.23□□□□□ -0.29
PDE6B-212ENST00000496514 IFT74Q96LB3 600 aa13.23□□□□□ -0.29
PDE6B-212ENST00000496514 EFCC1Q9HA90 598 aa13.23□□□□□ -0.29
PDE6B-212ENST00000496514 ZNF302Q9NR11 478 aa13.23□□□□□ -0.29
PDE6B-212ENST00000496514 RNF14Q9UBS8 474 aa13.23□□□□□ -0.29
PDE6B-212ENST00000496514 USTQ9Y2C2 406 aa13.23□□□□□ -0.29
PDE6B-212ENST00000496514 BTNL10A8MVZ5 291 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 LYPLA2O95372 231 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 CD58P19256 250 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 CDR1P51861 262 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 MFAP3P55082 362 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 ABHD15Q6UXT9 468 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 GPD1LQ8N335 351 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 OR5B17Q8NGF7 314 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 C1orf54Q8WWF1 131 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 HEMGNQ9BXL5 484 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 MTFR1LQ9H019 292 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 ANKEF1Q9NU02 776 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 CNOT8Q9UFF9 292 aaKnown RBP13.22□□□□□ -0.29
PDE6B-212ENST00000496514 EXOC7Q9UPT5 735 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 TLDC2A0PJX2 215 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 CCDC172P0C7W6 258 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 GLRA2P23416 452 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 RPS12P25398 132 aaKnown RBP13.22□□□□□ -0.29
PDE6B-212ENST00000496514 GLE1Q53GS7 698 aaKnown RBP13.22□□□□□ -0.29
PDE6B-212ENST00000496514 SCARA5Q6ZMJ2 495 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 CCDC25Q86WR0 208 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 FAM71AQ8IYT1 594 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 CAVIN3Q969G5 261 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 GPRASP2Q96D09 838 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 CAPS2Q9BXY5 557 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 GPRC5DQ9NZD1 345 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 NCANO14594 1321 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 CLDN3O15551 220 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 USP2O75604 605 aaPredicted RBP13.22□□□□□ -0.29
PDE6B-212ENST00000496514 PIK3CAP42336 1068 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 SEC24CP53992 1094 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 ORC1Q13415 861 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 TTC27Q6P3X3 843 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 DEPTORQ8TB45 409 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 MAGOHBQ96A72 148 aaKnown RBP13.22□□□□□ -0.29
PDE6B-212ENST00000496514 C11orf70Q9BRQ4 267 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 ISCUQ9H1K1 167 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 TMEM8AQ9HCN3 771 aa13.22□□□□□ -0.29
PDE6B-212ENST00000496514 AFG3L2Q9Y4W6 797 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms