RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 MARK3P27448 753 aa12.39□□□□□ -0.43
CDCA7-208ENST00000496441 NLRP11P59045 1033 aaKnown RBP12.39□□□□□ -0.43
CDCA7-208ENST00000496441 MAP3K10Q02779 954 aa12.39□□□□□ -0.43
CDCA7-208ENST00000496441 ZNF394Q53GI3 561 aa12.39□□□□□ -0.43
CDCA7-208ENST00000496441 TTC27Q6P3X3 843 aa12.39□□□□□ -0.43
CDCA7-208ENST00000496441 CCDC137Q6PK04 289 aaKnown RBP12.39□□□□□ -0.43
CDCA7-208ENST00000496441 NIPA1Q7RTP0 329 aa12.39□□□□□ -0.43
CDCA7-208ENST00000496441 TMC3Q7Z5M5 1100 aa12.39□□□□□ -0.43
CDCA7-208ENST00000496441 JAMLQ86YT9 394 aa12.39□□□□□ -0.43
CDCA7-208ENST00000496441 MAP4K3Q8IVH8 894 aa12.39□□□□□ -0.43
CDCA7-208ENST00000496441 SCYL3Q8IZE3 742 aa12.39□□□□□ -0.43
CDCA7-208ENST00000496441 HELQQ8TDG4 1101 aa12.39□□□□□ -0.43
CDCA7-208ENST00000496441 ATG4AQ8WYN0 398 aa12.39□□□□□ -0.43
CDCA7-208ENST00000496441 ATP6V0A1Q93050 837 aa12.39□□□□□ -0.43
CDCA7-208ENST00000496441 LRRC45Q96CN5 670 aa12.39□□□□□ -0.43
CDCA7-208ENST00000496441 IFT74Q96LB3 600 aa12.39□□□□□ -0.43
CDCA7-208ENST00000496441 HEMGNQ9BXL5 484 aa12.39□□□□□ -0.43
CDCA7-208ENST00000496441 CCDC113Q9H0I3 377 aa12.39□□□□□ -0.43
CDCA7-208ENST00000496441 CARD9Q9H257 536 aa12.39□□□□□ -0.43
CDCA7-208ENST00000496441 CYP26B1Q9NR63 512 aa12.39□□□□□ -0.43
CDCA7-208ENST00000496441 GGA3Q9NZ52 723 aa12.39□□□□□ -0.43
CDCA7-208ENST00000496441 ANAPC7Q9UJX3 599 aa12.39□□□□□ -0.43
CDCA7-208ENST00000496441 ZNF214Q9UL59 606 aaPredicted RBP12.39□□□□□ -0.43
CDCA7-208ENST00000496441 USTQ9Y2C2 406 aa12.39□□□□□ -0.43
CDCA7-208ENST00000496441 TNS1Q9HBL0 1735 aaKnown RBP12.39□□□□□ -0.43
CDCA7-208ENST00000496441 MYH9P35579 1960 aaKnown RBP12.38□□□□□ -0.43
CDCA7-208ENST00000496441 CES2O00748 559 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 KCNA2P16389 499 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 FGFR4P22455 802 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 ANXA13P27216 316 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 LIG3P49916 1009 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 ALCAMQ13740 583 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 SEL1L2Q5TEA6 688 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 ZSWIM1Q9BR11 485 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 SLITRK6Q9H5Y7 841 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 PSAPP07602 524 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 MAPTP10636 758 aaKnown RBP12.38□□□□□ -0.43
CDCA7-208ENST00000496441 LSP1P33241 339 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 PTENP60484 403 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 MAGOHP61326 146 aaKnown RBP12.38□□□□□ -0.43
CDCA7-208ENST00000496441 CYP24A1Q07973 514 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 ZBTB33Q86T24 672 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 CDR2LQ86X02 465 aaPredicted RBP12.38□□□□□ -0.43
CDCA7-208ENST00000496441 GPD1LQ8N335 351 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 PRELID2Q8N945 189 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 MDM1Q8TC05 714 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 BBXQ8WY36 941 aaPredicted RBP12.38□□□□□ -0.43
CDCA7-208ENST00000496441 ZNF516Q92618 1163 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 IWS1Q96ST2 819 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 TCHPQ9BT92 498 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 PAGR1Q9BTK6 254 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 TMEM8AQ9HCN3 771 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 KLHL11Q9NVR0 708 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 CYP39A1Q9NYL5 469 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 COL11A1P12107 1806 aaPredicted RBP12.38□□□□□ -0.43
CDCA7-208ENST00000496441 PSME4Q14997 1843 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 O00370 1275 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 WDR78Q5VTH9 848 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 TAS1R3Q7RTX0 852 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 CCDC50Q8IVM0 306 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 SHC3Q92529 594 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 ERP44Q9BS26 406 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 TARS2Q9BW92 718 aaKnown RBP12.38□□□□□ -0.43
CDCA7-208ENST00000496441 C1orf112Q9NSG2 853 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 ANKEF1Q9NU02 776 aa12.38□□□□□ -0.43
CDCA7-208ENST00000496441 PTPRJQ12913 1337 aa12.37□□□□□ -0.43
CDCA7-208ENST00000496441 ZNF541Q9H0D2 1346 aa12.37□□□□□ -0.43
CDCA7-208ENST00000496441 SHOX2O60902 331 aaPredicted RBP12.37□□□□□ -0.43
CDCA7-208ENST00000496441 PIK3CAP42336 1068 aa12.37□□□□□ -0.43
CDCA7-208ENST00000496441 OSTNP61366 133 aa12.37□□□□□ -0.43
CDCA7-208ENST00000496441 ATP8B4Q8TF62 1192 aa12.37□□□□□ -0.43
CDCA7-208ENST00000496441 KIFAP3Q92845 792 aa12.37□□□□□ -0.43
CDCA7-208ENST00000496441 ZBTB10Q96DT7 871 aa12.37□□□□□ -0.43
CDCA7-208ENST00000496441 RAB17Q9H0T7 212 aa12.37□□□□□ -0.43
CDCA7-208ENST00000496441 R3HDMLQ9H3Y0 253 aa12.37□□□□□ -0.43
CDCA7-208ENST00000496441 ATP6V0A4Q9HBG4 840 aa12.37□□□□□ -0.43
CDCA7-208ENST00000496441 LYPLA2O95372 231 aa12.37□□□□□ -0.43
CDCA7-208ENST00000496441 RRM1P23921 792 aa12.37□□□□□ -0.43
CDCA7-208ENST00000496441 MAPK4P31152 587 aa12.37□□□□□ -0.43
CDCA7-208ENST00000496441 RPL21P46778 160 aaKnown RBP12.37□□□□□ -0.43
CDCA7-208ENST00000496441 DRP2Q13474 957 aa12.37□□□□□ -0.43
CDCA7-208ENST00000496441 PPP1R7Q15435 360 aa12.37□□□□□ -0.43
CDCA7-208ENST00000496441 DCAF15Q66K64 600 aa12.37□□□□□ -0.43
CDCA7-208ENST00000496441 TMEM270Q6UE05 265 aa12.37□□□□□ -0.43
CDCA7-208ENST00000496441 CYFIP2Q96F07 1278 aa12.37□□□□□ -0.43
CDCA7-208ENST00000496441 C11orf70Q9BRQ4 267 aa12.37□□□□□ -0.43
CDCA7-208ENST00000496441 TEX13BQ9BXU2 312 aa12.37□□□□□ -0.43
CDCA7-208ENST00000496441 RASSF4Q9H2L5 321 aa12.37□□□□□ -0.43
CDCA7-208ENST00000496441 TMBIM4Q9HC24 238 aa12.37□□□□□ -0.43
CDCA7-208ENST00000496441 TTLL13PA6NNM8 815 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 TULP2O00295 520 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 RPS6KA5O75582 802 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 ECM2O94769 699 aaPredicted RBP12.36□□□□□ -0.43
CDCA7-208ENST00000496441 CD58P19256 250 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 DSG3P32926 999 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 CDR2Q01850 454 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 STRN3Q13033 797 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 MYBPC2Q14324 1141 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 EMC2Q15006 297 aa12.36□□□□□ -0.43
CDCA7-208ENST00000496441 PRUNE1Q86TP1 453 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms