RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 C11orf63Q6NUN7 778 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 HEATR3Q7Z4Q2 680 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 RHOT2Q8IXI1 618 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 MICALL2Q8IY33 904 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 MGARPQ8TDB4 240 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 GATA6Q92908 595 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 DNAJC19Q96DA6 116 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 ERP27Q96DN0 273 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 UBN1Q9NPG3 1134 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 HDAC9Q9UKV0 1011 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 NR2E1Q9Y466 385 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 COMMD3-BMI1R4GMX3 469 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 PFASO15067 1338 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 hCG_1984214I3L0E3 225 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 RASA1P20936 1047 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 FGFR4P22455 802 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 SMARCA1P28370 1054 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 STAT1P42224 750 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 ZNF713Q8N859 430 aaPredicted RBP16.01■□□□□ 0.15
MACF1-223ENST00000496360 SLC35G2Q8TBE7 412 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 U2AF1L4Q8WU68 220 aaKnown RBP16.01■□□□□ 0.15
MACF1-223ENST00000496360 SLCO2A1Q92959 643 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 SLC7A6OSQ96CW6 309 aaPredicted RBP16.01■□□□□ 0.15
MACF1-223ENST00000496360 KCTD10Q9H3F6 313 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 CIDEBQ9UHD4 219 aa16.01■□□□□ 0.15
MACF1-223ENST00000496360 TSPY2A6NKD2 308 aa16■□□□□ 0.15
MACF1-223ENST00000496360 ZWINTO95229 277 aa16■□□□□ 0.15
MACF1-223ENST00000496360 GM2AP17900 193 aa16■□□□□ 0.15
MACF1-223ENST00000496360 PON1P27169 355 aa16■□□□□ 0.15
MACF1-223ENST00000496360 RCN2Q14257 317 aa16■□□□□ 0.15
MACF1-223ENST00000496360 CALCRLQ16602 461 aa16■□□□□ 0.15
MACF1-223ENST00000496360 CEP128Q6ZU80 1094 aa16■□□□□ 0.15
MACF1-223ENST00000496360 SYDE1Q6ZW31 735 aaPredicted RBP16■□□□□ 0.15
MACF1-223ENST00000496360 C12orf50Q8NA57 414 aaPredicted RBP16■□□□□ 0.15
MACF1-223ENST00000496360 PNMA1Q8ND90 353 aa16■□□□□ 0.15
MACF1-223ENST00000496360 HELBQ8NG08 1087 aaPredicted RBP16■□□□□ 0.15
MACF1-223ENST00000496360 TRPM4Q8TD43 1214 aa16■□□□□ 0.15
MACF1-223ENST00000496360 KLRG1Q96E93 195 aa16■□□□□ 0.15
MACF1-223ENST00000496360 OLFM3Q96PB7 478 aa16■□□□□ 0.15
MACF1-223ENST00000496360 CCDC77Q9BR77 488 aa16■□□□□ 0.15
MACF1-223ENST00000496360 COA1Q9GZY4 146 aa16■□□□□ 0.15
MACF1-223ENST00000496360 NT5C3AQ9H0P0 336 aa16■□□□□ 0.15
MACF1-223ENST00000496360 ERVK-5Q9HDB9 667 aa16■□□□□ 0.15
MACF1-223ENST00000496360 CREBZFQ9NS37 354 aa16■□□□□ 0.15
MACF1-223ENST00000496360 ZNF212Q9UDV6 495 aa16■□□□□ 0.15
MACF1-223ENST00000496360 KDM3AQ9Y4C1 1321 aa16■□□□□ 0.15
MACF1-223ENST00000496360 PSME4Q14997 1843 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 USP17L12C9JPN9 530 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 USP17L21D6R901 530 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 PYGBP11216 843 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 RBM5P52756 815 aaKnown RBP eCLIP15.99■□□□□ 0.15
MACF1-223ENST00000496360 SFSWAPQ12872 951 aaKnown RBP15.99■□□□□ 0.15
MACF1-223ENST00000496360 LRRC41Q15345 812 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 SLC45A4Q5BKX6 768 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 RSBN1LQ6PCB5 846 aaPredicted RBP15.99■□□□□ 0.15
MACF1-223ENST00000496360 ADGRA1Q86SQ6 560 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 TXNRD3Q86VQ6 643 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 PRELID2Q8N945 189 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 ANKRD42Q8N9B4 389 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 MMADHCQ9H3L0 296 aaPredicted RBP15.99■□□□□ 0.15
MACF1-223ENST00000496360 TYW1Q9NV66 732 aaKnown RBP15.99■□□□□ 0.15
MACF1-223ENST00000496360 DDX43Q9NXZ2 648 aaKnown RBP15.99■□□□□ 0.15
MACF1-223ENST00000496360 MAD2L2Q9UI95 211 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 PPP1R9AQ9ULJ8 1098 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 USP17L3A6NCW0 530 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 USP17L4A6NCW7 530 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 SLC16A3O15427 465 aaKnown RBP15.99■□□□□ 0.15
MACF1-223ENST00000496360 ATP9AO75110 1047 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 CDH16O75309 829 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 KLRK1P26718 216 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 GSTT1P30711 240 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 HIRAP54198 1017 aaPredicted RBP15.99■□□□□ 0.15
MACF1-223ENST00000496360 SLC34A1Q06495 639 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 AP1B1Q10567 949 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 MOGSQ13724 837 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 HYIQ5T013 277 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 SEL1L2Q5TEA6 688 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 SNX30Q5VWJ9 437 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 DAB2IPQ5VWQ8 1189 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 C4orf50Q6ZRC1 276 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 MAEAQ7L5Y9 396 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 USP17L1Q7RTZ2 530 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 SNX29Q8TEQ0 813 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 PPP1R14BQ96C90 147 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 PLEKHG4BQ96PX9 1271 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 HAPLN3Q96S86 360 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 NDNQ99608 321 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 CRNKL1Q9BZJ0 848 aaKnown RBP15.99■□□□□ 0.15
MACF1-223ENST00000496360 KIAA1683Q9H0B3 1180 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 CDC42EP4Q9H3Q1 356 aaKnown RBP15.99■□□□□ 0.15
MACF1-223ENST00000496360 DENND2DQ9H6A0 471 aaPredicted RBP15.99■□□□□ 0.15
MACF1-223ENST00000496360 TRAF3IP3Q9Y228 551 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 CHKBQ9Y259 395 aa15.99■□□□□ 0.15
MACF1-223ENST00000496360 A0A1B0GUL6 1792 aa15.98■□□□□ 0.15
MACF1-223ENST00000496360 ZSCAN9O15535 394 aaPredicted RBP15.98■□□□□ 0.15
MACF1-223ENST00000496360 MAP3K13O43283 966 aa15.98■□□□□ 0.15
MACF1-223ENST00000496360 TXKP42681 527 aa15.98■□□□□ 0.15
MACF1-223ENST00000496360 BCAMP50895 628 aa15.98■□□□□ 0.15
MACF1-223ENST00000496360 NAPAP54920 295 aa15.98■□□□□ 0.15
MACF1-223ENST00000496360 EPHA7Q15375 998 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms