RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 FAM20AQ96MK3 541 aa14.98□□□□□ -0.01
COL1A1-209ENST00000495677 VPS54Q9P1Q0 977 aa14.98□□□□□ -0.01
COL1A1-209ENST00000495677 KCNH3Q9ULD8 1083 aa14.98□□□□□ -0.01
COL1A1-209ENST00000495677 PCDHA4Q9UN74 947 aa14.98□□□□□ -0.01
COL1A1-209ENST00000495677 HES2Q9Y543 173 aa14.98□□□□□ -0.01
COL1A1-209ENST00000495677 GREB1Q4ZG55 1949 aa14.98□□□□□ -0.01
COL1A1-209ENST00000495677 SF3B1O75533 1304 aaKnown RBP eCLIP14.97□□□□□ -0.01
COL1A1-209ENST00000495677 LRP3O75074 770 aa14.97□□□□□ -0.01
COL1A1-209ENST00000495677 XYLBO75191 536 aa14.97□□□□□ -0.01
COL1A1-209ENST00000495677 TADA2AO75478 443 aa14.97□□□□□ -0.01
COL1A1-209ENST00000495677 RPL17P18621 184 aaKnown RBP14.97□□□□□ -0.01
COL1A1-209ENST00000495677 NRLP54845 237 aa14.97□□□□□ -0.01
COL1A1-209ENST00000495677 EVCP57679 992 aa14.97□□□□□ -0.01
COL1A1-209ENST00000495677 NLRP5P59047 1200 aa14.97□□□□□ -0.01
COL1A1-209ENST00000495677 PPM1LQ5SGD2 360 aa14.97□□□□□ -0.01
COL1A1-209ENST00000495677 Q6ZUG5 572 aa14.97□□□□□ -0.01
COL1A1-209ENST00000495677 GLYCTKQ8IVS8 523 aa14.97□□□□□ -0.01
COL1A1-209ENST00000495677 ST13P5Q8NFI4 369 aaPredicted RBP14.97□□□□□ -0.01
COL1A1-209ENST00000495677 LNX1Q8TBB1 728 aaPredicted RBP14.97□□□□□ -0.01
COL1A1-209ENST00000495677 KCNB2Q92953 911 aa14.97□□□□□ -0.01
COL1A1-209ENST00000495677 B3GALT6Q96L58 329 aa14.97□□□□□ -0.01
COL1A1-209ENST00000495677 IER2Q9BTL4 223 aa14.97□□□□□ -0.01
COL1A1-209ENST00000495677 PHF20Q9BVI0 1012 aa14.97□□□□□ -0.01
COL1A1-209ENST00000495677 NFKBIZQ9BYH8 718 aa14.97□□□□□ -0.01
COL1A1-209ENST00000495677 WRAP73Q9P2S5 460 aaPredicted RBP14.97□□□□□ -0.01
COL1A1-209ENST00000495677 NAP1L2Q9ULW6 460 aaPredicted RBP14.97□□□□□ -0.01
COL1A1-209ENST00000495677 MRPS17Q9Y2R5 130 aaKnown RBP14.97□□□□□ -0.01
COL1A1-209ENST00000495677 SPAG17Q6Q759 2223 aa14.97□□□□□ -0.01
COL1A1-209ENST00000495677 DCDC2BA2VCK2 349 aa14.96□□□□□ -0.01
COL1A1-209ENST00000495677 ECI2O75521 394 aa14.96□□□□□ -0.01
COL1A1-209ENST00000495677 C8AP07357 584 aa14.96□□□□□ -0.01
COL1A1-209ENST00000495677 COL4A2P08572 1712 aa14.96□□□□□ -0.01
COL1A1-209ENST00000495677 ARF4P18085 180 aaPredicted RBP14.96□□□□□ -0.01
COL1A1-209ENST00000495677 TARSP26639 723 aaKnown RBP14.96□□□□□ -0.01
COL1A1-209ENST00000495677 NTHL1P78549 312 aa14.96□□□□□ -0.01
COL1A1-209ENST00000495677 FGD1P98174 961 aa14.96□□□□□ -0.01
COL1A1-209ENST00000495677 ADCY1Q08828 1119 aa14.96□□□□□ -0.01
COL1A1-209ENST00000495677 AMHR2Q16671 573 aa14.96□□□□□ -0.01
COL1A1-209ENST00000495677 ST3GAL2Q16842 350 aa14.96□□□□□ -0.01
COL1A1-209ENST00000495677 RTP2Q5QGT7 225 aa14.96□□□□□ -0.01
COL1A1-209ENST00000495677 LIN9Q5TKA1 542 aa14.96□□□□□ -0.01
COL1A1-209ENST00000495677 GALNT17Q6IS24 598 aa14.96□□□□□ -0.01
COL1A1-209ENST00000495677 PDXDC1Q6P996 788 aa14.96□□□□□ -0.01
COL1A1-209ENST00000495677 ZNF852Q6ZMS4 543 aa14.96□□□□□ -0.01
COL1A1-209ENST00000495677 CELF5Q8N6W0 485 aaKnown RBP14.96□□□□□ -0.01
COL1A1-209ENST00000495677 DAGLBQ8NCG7 672 aa14.96□□□□□ -0.01
COL1A1-209ENST00000495677 ITFG1Q8TB96 612 aa14.96□□□□□ -0.01
COL1A1-209ENST00000495677 BRF1Q92994 677 aa14.96□□□□□ -0.01
COL1A1-209ENST00000495677 TTPALQ9BTX7 342 aa14.96□□□□□ -0.01
COL1A1-209ENST00000495677 KCNMB3Q9NPA1 279 aa14.96□□□□□ -0.01
COL1A1-209ENST00000495677 DDX25Q9UHL0 483 aaKnown RBP14.96□□□□□ -0.01
COL1A1-209ENST00000495677 GMEB2Q9UKD1 530 aa14.96□□□□□ -0.01
COL1A1-209ENST00000495677 VAV3Q9UKW4 847 aa14.96□□□□□ -0.01
COL1A1-209ENST00000495677 TICRRQ7Z2Z1 1910 aa14.96□□□□□ -0.02
COL1A1-209ENST00000495677 CFAP47Q6ZTR5 3102 aa14.95□□□□□ -0.02
COL1A1-209ENST00000495677 A0A1B0GUA9 196 aa14.95□□□□□ -0.02
COL1A1-209ENST00000495677 SHISA7A6NL88 538 aa14.95□□□□□ -0.02
COL1A1-209ENST00000495677 TDGF1P13385 188 aa14.95□□□□□ -0.02
COL1A1-209ENST00000495677 CD72P21854 359 aa14.95□□□□□ -0.02
COL1A1-209ENST00000495677 YWHABP31946 246 aaKnown RBP14.95□□□□□ -0.02
COL1A1-209ENST00000495677 RAB33AQ14088 237 aa14.95□□□□□ -0.02
COL1A1-209ENST00000495677 HSP90AA2PQ14568 343 aaPredicted RBP14.95□□□□□ -0.02
COL1A1-209ENST00000495677 EMC2Q15006 297 aa14.95□□□□□ -0.02
COL1A1-209ENST00000495677 EPHA7Q15375 998 aa14.95□□□□□ -0.02
COL1A1-209ENST00000495677 PPP4R3AQ6IN85 833 aa14.95□□□□□ -0.02
COL1A1-209ENST00000495677 PRSS55Q6UWB4 352 aaPredicted RBP14.95□□□□□ -0.02
COL1A1-209ENST00000495677 BLIDQ8IZY5 108 aa14.95□□□□□ -0.02
COL1A1-209ENST00000495677 NETO1Q8TDF5 533 aa14.95□□□□□ -0.02
COL1A1-209ENST00000495677 CPB2Q96IY4 423 aa14.95□□□□□ -0.02
COL1A1-209ENST00000495677 MTRQ99707 1265 aa14.95□□□□□ -0.02
COL1A1-209ENST00000495677 SLC26A6Q9BXS9 759 aa14.95□□□□□ -0.02
COL1A1-209ENST00000495677 TRIM6Q9C030 488 aaPredicted RBP14.95□□□□□ -0.02
COL1A1-209ENST00000495677 PARD6AQ9NPB6 346 aa14.95□□□□□ -0.02
COL1A1-209ENST00000495677 AVENQ9NQS1 362 aaPredicted RBP14.95□□□□□ -0.02
COL1A1-209ENST00000495677 GDE1Q9NZC3 331 aa14.95□□□□□ -0.02
COL1A1-209ENST00000495677 DAXXQ9UER7 740 aaPredicted RBP14.95□□□□□ -0.02
COL1A1-209ENST00000495677 CNOT1A5YKK6 2376 aaKnown RBP14.94□□□□□ -0.02
COL1A1-209ENST00000495677 SLC30A4O14863 429 aa14.94□□□□□ -0.02
COL1A1-209ENST00000495677 TBX3O15119 743 aa14.94□□□□□ -0.02
COL1A1-209ENST00000495677 MBTD1Q05BQ5 628 aa14.94□□□□□ -0.02
COL1A1-209ENST00000495677 ELAVL2Q12926 359 aaKnown RBP14.94□□□□□ -0.02
COL1A1-209ENST00000495677 TUSC3Q13454 348 aa14.94□□□□□ -0.02
COL1A1-209ENST00000495677 TFDP1Q14186 410 aa14.94□□□□□ -0.02
COL1A1-209ENST00000495677 NPY5RQ15761 445 aa14.94□□□□□ -0.02
COL1A1-209ENST00000495677 LAIR1Q6GTX8 287 aa14.94□□□□□ -0.02
COL1A1-209ENST00000495677 SLC27A1Q6PCB7 646 aa14.94□□□□□ -0.02
COL1A1-209ENST00000495677 TPRG1Q6ZUI0 275 aa14.94□□□□□ -0.02
COL1A1-209ENST00000495677 NPAS3Q8IXF0 933 aa14.94□□□□□ -0.02
COL1A1-209ENST00000495677 ZNF687Q8N1G0 1237 aa14.94□□□□□ -0.02
COL1A1-209ENST00000495677 DNASE1L2Q92874 299 aa14.94□□□□□ -0.02
COL1A1-209ENST00000495677 NXF3Q9H4D5 531 aaKnown RBP14.94□□□□□ -0.02
COL1A1-209ENST00000495677 XPNPEP1Q9NQW7 623 aa14.94□□□□□ -0.02
COL1A1-209ENST00000495677 DNMT3BQ9UBC3 853 aaKnown RBP14.94□□□□□ -0.02
COL1A1-209ENST00000495677 USP18Q9UMW8 372 aa14.94□□□□□ -0.02
COL1A1-209ENST00000495677 INO80B-WBP1J3KQ70 363 aa14.93□□□□□ -0.02
COL1A1-209ENST00000495677 MAN2B1O00754 1011 aa14.93□□□□□ -0.02
COL1A1-209ENST00000495677 CCL16O15467 120 aa14.93□□□□□ -0.02
COL1A1-209ENST00000495677 SLC37A4O43826 429 aa14.93□□□□□ -0.02
COL1A1-209ENST00000495677 RETP07949 1114 aa14.93□□□□□ -0.02
COL1A1-209ENST00000495677 AKAP5P24588 427 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms