RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 COQ4Q9Y3A0 265 aa20.02■□□□□ 0.8
TSPAN4-212ENST00000494815 LDHAP00338 332 aaKnown RBP20.02■□□□□ 0.8
TSPAN4-212ENST00000494815 CCDC172P0C7W6 258 aa20.02■□□□□ 0.8
TSPAN4-212ENST00000494815 HOXD8P13378 290 aaPredicted RBP20.02■□□□□ 0.8
TSPAN4-212ENST00000494815 SOX5P35711 763 aa20.02■□□□□ 0.8
TSPAN4-212ENST00000494815 MAP2K5Q13163 448 aa20.02■□□□□ 0.8
TSPAN4-212ENST00000494815 IFNL1Q8IU54 200 aa20.02■□□□□ 0.8
TSPAN4-212ENST00000494815 ZBTB8OSQ8IWT0 167 aa20.02■□□□□ 0.8
TSPAN4-212ENST00000494815 TFR2Q9UP52 801 aa20.02■□□□□ 0.8
TSPAN4-212ENST00000494815 HOXC6P09630 235 aa20.01■□□□□ 0.79
TSPAN4-212ENST00000494815 TFDP1Q14186 410 aa20.01■□□□□ 0.79
TSPAN4-212ENST00000494815 DRAP1Q14919 205 aaPredicted RBP20.01■□□□□ 0.79
TSPAN4-212ENST00000494815 PHLDB3Q6NSJ2 640 aa20.01■□□□□ 0.79
TSPAN4-212ENST00000494815 VPS36Q86VN1 386 aa20.01■□□□□ 0.79
TSPAN4-212ENST00000494815 LRRC71Q8N4P6 559 aa20.01■□□□□ 0.79
TSPAN4-212ENST00000494815 CCDC113Q9H0I3 377 aa20.01■□□□□ 0.79
TSPAN4-212ENST00000494815 RNPEPQ9H4A4 650 aa20.01■□□□□ 0.79
TSPAN4-212ENST00000494815 FAM204AQ9H8W3 233 aa20.01■□□□□ 0.79
TSPAN4-212ENST00000494815 SUCLA2Q9P2R7 463 aaPredicted RBP20.01■□□□□ 0.79
TSPAN4-212ENST00000494815 COL1A2P08123 1366 aa20.01■□□□□ 0.79
TSPAN4-212ENST00000494815 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.01■□□□□ 0.79
TSPAN4-212ENST00000494815 ASAP2O43150 1006 aa20.01■□□□□ 0.79
TSPAN4-212ENST00000494815 SMPD1P17405 629 aa20.01■□□□□ 0.79
TSPAN4-212ENST00000494815 TNNT3P45378 269 aaPredicted RBP20.01■□□□□ 0.79
TSPAN4-212ENST00000494815 MAP9Q49MG5 647 aa20.01■□□□□ 0.79
TSPAN4-212ENST00000494815 C10orf76Q5T2E6 689 aa20.01■□□□□ 0.79
TSPAN4-212ENST00000494815 C17orf99Q6UX52 265 aa20.01■□□□□ 0.79
TSPAN4-212ENST00000494815 ZNF571Q7Z3V5 609 aaPredicted RBP20.01■□□□□ 0.79
TSPAN4-212ENST00000494815 TARS2Q9BW92 718 aaKnown RBP20.01■□□□□ 0.79
TSPAN4-212ENST00000494815 ADAMTS1Q9UHI8 967 aa20.01■□□□□ 0.79
TSPAN4-212ENST00000494815 A0A087X0T9 212 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 A0A0B4J269 797 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 PHACTR2O75167 634 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 GFPT2O94808 682 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 C22orf31O95567 290 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 FAM228BP0C875 321 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 CLDN10P78369 228 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 PSMD6Q15008 389 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 FOXR1Q6PIV2 292 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 LRRC31Q6UY01 552 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 RNF149Q8NC42 400 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 TRAPPC12Q8WVT3 735 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 ZBTB9Q96C00 473 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20■□□□□ 0.79
TSPAN4-212ENST00000494815 MRPL4Q9BYD3 311 aaKnown RBP20■□□□□ 0.79
TSPAN4-212ENST00000494815 MAGEB2O15479 319 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 EVI5O60447 810 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 MSCO60682 206 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 INSRRP14616 1297 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 GPC3P51654 580 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 ENOX2Q16206 610 aaKnown RBP20■□□□□ 0.79
TSPAN4-212ENST00000494815 MAPK6Q16659 721 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 EFCAB12Q6NXP0 572 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 C16orf70Q9BSU1 422 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 MSTO1Q9BUK6 570 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 GPR88Q9GZN0 384 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 TLL2Q9Y6L7 1015 aa20■□□□□ 0.79
TSPAN4-212ENST00000494815 RNF40O75150 1001 aa19.99■□□□□ 0.79
TSPAN4-212ENST00000494815 MAP2K1Q02750 393 aaPredicted RBP19.99■□□□□ 0.79
TSPAN4-212ENST00000494815 GOLGA6L1Q8N7Z2 621 aa19.99■□□□□ 0.79
TSPAN4-212ENST00000494815 FBXL13Q8NEE6 735 aa19.99■□□□□ 0.79
TSPAN4-212ENST00000494815 RPGRIP1Q96KN7 1286 aa19.99■□□□□ 0.79
TSPAN4-212ENST00000494815 GEMIN8Q9NWZ8 242 aaKnown RBP19.99■□□□□ 0.79
TSPAN4-212ENST00000494815 DUSP10Q9Y6W6 482 aa19.99■□□□□ 0.79
TSPAN4-212ENST00000494815 ATP8B3O60423 1300 aa19.99■□□□□ 0.79
TSPAN4-212ENST00000494815 TARSL2A2RTX5 802 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 TOM1L1O75674 476 aa19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 SYF2O95926 243 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 EDN1P05305 212 aa19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 SRGAP2CP0DJJ0 459 aa19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 DLATP10515 647 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 NLRP11P59045 1033 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 SREBF2Q12772 1141 aa19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 PAPD7Q5XG87 772 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 RHPN2Q8IUC4 686 aa19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 TRIM58Q8NG06 486 aa19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 OR6J1Q8NGC5 347 aa19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 NFKBIZQ9BYH8 718 aa19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 HAPLN2Q9GZV7 340 aa19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 ZFYVE28Q9HCC9 887 aa19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 UBE2TQ9NPD8 197 aaPredicted RBP19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 ANKFY1Q9P2R3 1169 aa19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 MACROD2A1Z1Q3 448 aa19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 MMP3P08254 477 aa19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 POU5F1BQ06416 359 aa19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 SV2AQ7L0J3 742 aa19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 RNF10Q8N5U6 811 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 METTL13Q8N6R0 699 aa19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 USP6NLQ92738 828 aa19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 ZBTB45Q96K62 511 aaPredicted RBP19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 FNBP1Q96RU3 617 aa19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 POP1Q99575 1024 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 HPCAL4Q9UM19 191 aa19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 SAR1BQ9Y6B6 198 aa19.98■□□□□ 0.79
TSPAN4-212ENST00000494815 ANO9A1A5B4 782 aa19.97■□□□□ 0.79
TSPAN4-212ENST00000494815 FAM155AB1AL88 458 aaPredicted RBP19.97■□□□□ 0.79
TSPAN4-212ENST00000494815 H3BRB1 525 aa19.97■□□□□ 0.79
TSPAN4-212ENST00000494815 CLDN3O15551 220 aa19.97■□□□□ 0.79
TSPAN4-212ENST00000494815 PRKCBP05771 671 aa19.97■□□□□ 0.79
TSPAN4-212ENST00000494815 ZNF286BP0CG31 522 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms