RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 EMILIN2Q9BXX0 1053 aa19.35■□□□□ 0.69
HDAC4-211ENST00000494800 MIOSQ9NXC5 875 aa19.35■□□□□ 0.69
HDAC4-211ENST00000494800 IRAK3Q9Y616 596 aa19.35■□□□□ 0.69
HDAC4-211ENST00000494800 VCANP13611 3396 aa19.35■□□□□ 0.69
HDAC4-211ENST00000494800 SPTBN5Q9NRC6 3674 aaKnown RBP19.35■□□□□ 0.69
HDAC4-211ENST00000494800 K7ENM7 598 aa19.34■□□□□ 0.69
HDAC4-211ENST00000494800 TOM1L1O75674 476 aa19.34■□□□□ 0.69
HDAC4-211ENST00000494800 URODP06132 367 aa19.34■□□□□ 0.69
HDAC4-211ENST00000494800 GRM5P41594 1212 aa19.34■□□□□ 0.69
HDAC4-211ENST00000494800 STAT6P42226 847 aa19.34■□□□□ 0.69
HDAC4-211ENST00000494800 MATR3P43243 847 aaKnown RBP eCLIP19.34■□□□□ 0.691e-7■■■■■ 27.8
HDAC4-211ENST00000494800 NCKAP1LP55160 1127 aa19.34■□□□□ 0.69
HDAC4-211ENST00000494800 DLX2Q07687 328 aaPredicted RBP19.34■□□□□ 0.69
HDAC4-211ENST00000494800 COASYQ13057 564 aa19.34■□□□□ 0.69
HDAC4-211ENST00000494800 ZPBP2Q6X784 338 aa19.34■□□□□ 0.69
HDAC4-211ENST00000494800 USP49Q70CQ1 688 aa19.34■□□□□ 0.69
HDAC4-211ENST00000494800 TAS1R3Q7RTX0 852 aa19.34■□□□□ 0.69
HDAC4-211ENST00000494800 HAUS6Q7Z4H7 955 aa19.34■□□□□ 0.69
HDAC4-211ENST00000494800 GSTCDQ8NEC7 633 aa19.34■□□□□ 0.69
HDAC4-211ENST00000494800 BCL7CQ8WUZ0 217 aaPredicted RBP19.34■□□□□ 0.69
HDAC4-211ENST00000494800 CASP10Q92851 521 aa19.34■□□□□ 0.69
HDAC4-211ENST00000494800 CDT1Q9H211 546 aa19.34■□□□□ 0.69
HDAC4-211ENST00000494800 MRPL17Q9NRX2 175 aaKnown RBP19.34■□□□□ 0.69
HDAC4-211ENST00000494800 TFIP11Q9UBB9 837 aaKnown RBP19.34■□□□□ 0.69
HDAC4-211ENST00000494800 CFAP45Q9UL16 551 aa19.34■□□□□ 0.69
HDAC4-211ENST00000494800 BARX2Q9UMQ3 279 aaPredicted RBP19.34■□□□□ 0.69
HDAC4-211ENST00000494800 ATG2AQ2TAZ0 1938 aa19.33■□□□□ 0.69
HDAC4-211ENST00000494800 TRAK2O60296 914 aa19.33■□□□□ 0.68
HDAC4-211ENST00000494800 TADA2AO75478 443 aa19.33■□□□□ 0.68
HDAC4-211ENST00000494800 SOD2P04179 222 aa19.33■□□□□ 0.68
HDAC4-211ENST00000494800 IL9P15248 144 aa19.33■□□□□ 0.68
HDAC4-211ENST00000494800 ZNF131P52739 623 aa19.33■□□□□ 0.68
HDAC4-211ENST00000494800 KIAA1841Q6NSI8 718 aa19.33■□□□□ 0.68
HDAC4-211ENST00000494800 LLGL2Q6P1M3 1020 aa19.33■□□□□ 0.68
HDAC4-211ENST00000494800 TMEM184AQ6ZMB5 413 aa19.33■□□□□ 0.68
HDAC4-211ENST00000494800 ZBTB33Q86T24 672 aa19.33■□□□□ 0.68
HDAC4-211ENST00000494800 PPFIBP1Q86W92 1011 aa19.33■□□□□ 0.68
HDAC4-211ENST00000494800 FAM178BQ8IXR5 827 aa19.33■□□□□ 0.68
HDAC4-211ENST00000494800 KCNG4Q8TDN1 519 aa19.33■□□□□ 0.68
HDAC4-211ENST00000494800 MSLNLQ96KJ4 702 aa19.33■□□□□ 0.68
HDAC4-211ENST00000494800 NECAB3Q96P71 396 aaPredicted RBP19.33■□□□□ 0.68
HDAC4-211ENST00000494800 PTPRHQ9HD43 1115 aa19.33■□□□□ 0.68
HDAC4-211ENST00000494800 CLEC1BQ9P126 229 aa19.33■□□□□ 0.68
HDAC4-211ENST00000494800 ANKFY1Q9P2R3 1169 aa19.33■□□□□ 0.68
HDAC4-211ENST00000494800 PRKAG3Q9UGI9 489 aa19.33■□□□□ 0.68
HDAC4-211ENST00000494800 CLDN3O15551 220 aa19.32■□□□□ 0.68
HDAC4-211ENST00000494800 MBTPS2O43462 519 aa19.32■□□□□ 0.68
HDAC4-211ENST00000494800 CUTAO60888 179 aa19.32■□□□□ 0.68
HDAC4-211ENST00000494800 GLP2RO95838 553 aa19.32■□□□□ 0.68
HDAC4-211ENST00000494800 HOXB8P17481 243 aaPredicted RBP19.32■□□□□ 0.68
HDAC4-211ENST00000494800 LIG4P49917 911 aa19.32■□□□□ 0.68
HDAC4-211ENST00000494800 BECN1Q14457 450 aa19.32■□□□□ 0.68
HDAC4-211ENST00000494800 HSP90AA2PQ14568 343 aaPredicted RBP19.32■□□□□ 0.68
HDAC4-211ENST00000494800 NOLC1Q14978 699 aaKnown RBP eCLIP19.32■□□□□ 0.68
HDAC4-211ENST00000494800 FOXD4L6Q3SYB3 417 aaPredicted RBP19.32■□□□□ 0.68
HDAC4-211ENST00000494800 FOXD4L3Q6VB84 417 aaPredicted RBP19.32■□□□□ 0.68
HDAC4-211ENST00000494800 LRRC15Q8TF66 581 aa19.32■□□□□ 0.68
HDAC4-211ENST00000494800 KCNN1Q92952 543 aa19.32■□□□□ 0.68
HDAC4-211ENST00000494800 ACAP3Q96P50 834 aa19.32■□□□□ 0.68
HDAC4-211ENST00000494800 POP1Q99575 1024 aaKnown RBP19.32■□□□□ 0.68
HDAC4-211ENST00000494800 HERC2P3Q9BVR0 1158 aa19.32■□□□□ 0.68
HDAC4-211ENST00000494800 LRRC27Q9C0I9 530 aa19.32■□□□□ 0.68
HDAC4-211ENST00000494800 MARCH5Q9NX47 278 aa19.32■□□□□ 0.68
HDAC4-211ENST00000494800 ADAM28Q9UKQ2 775 aa19.32■□□□□ 0.68
HDAC4-211ENST00000494800 PTGESO14684 152 aa19.31■□□□□ 0.68
HDAC4-211ENST00000494800 HNRNPDLO14979 420 aaKnown RBP19.31■□□□□ 0.68
HDAC4-211ENST00000494800 CLASP2O75122 1294 aaKnown RBP19.31■□□□□ 0.68
HDAC4-211ENST00000494800 BRD1O95696 1058 aa19.31■□□□□ 0.68
HDAC4-211ENST00000494800 HARSP12081 509 aaKnown RBP19.31■□□□□ 0.68
HDAC4-211ENST00000494800 PROZP22891 400 aa19.31■□□□□ 0.68
HDAC4-211ENST00000494800 SSTR3P32745 418 aaPredicted RBP19.31■□□□□ 0.68
HDAC4-211ENST00000494800 GLUD2P49448 558 aa19.31■□□□□ 0.68
HDAC4-211ENST00000494800 OSTNP61366 133 aa19.31■□□□□ 0.68
HDAC4-211ENST00000494800 PTPN14Q15678 1187 aa19.31■□□□□ 0.68
HDAC4-211ENST00000494800 SMAD2Q15796 467 aaKnown RBP19.31■□□□□ 0.68
HDAC4-211ENST00000494800 TPRNQ4KMQ1 711 aa19.31■□□□□ 0.68
HDAC4-211ENST00000494800 DYMQ7RTS9 669 aa19.31■□□□□ 0.68
HDAC4-211ENST00000494800 SMRP1Q8NCR6 262 aa19.31■□□□□ 0.68
HDAC4-211ENST00000494800 AUTS2Q8WXX7 1259 aa19.31■□□□□ 0.68
HDAC4-211ENST00000494800 VN1R3Q9BXE9 311 aa19.31■□□□□ 0.68
HDAC4-211ENST00000494800 SLC38A7Q9NVC3 462 aa19.31■□□□□ 0.68
HDAC4-211ENST00000494800 TBX20Q9UMR3 447 aa19.31■□□□□ 0.68
HDAC4-211ENST00000494800 SF3B1O75533 1304 aaKnown RBP eCLIP19.3■□□□□ 0.688e-6■■■■■ 107
HDAC4-211ENST00000494800 CASTOR2A6NHX0 329 aa19.3■□□□□ 0.68
HDAC4-211ENST00000494800 GAP43P17677 238 aa19.3■□□□□ 0.68
HDAC4-211ENST00000494800 KLRC2P26717 231 aa19.3■□□□□ 0.68
HDAC4-211ENST00000494800 ME1P48163 572 aa19.3■□□□□ 0.68
HDAC4-211ENST00000494800 CREMQ03060 361 aa19.3■□□□□ 0.68
HDAC4-211ENST00000494800 KYAT1Q16773 422 aa19.3■□□□□ 0.68
HDAC4-211ENST00000494800 USP41Q3LFD5 358 aa19.3■□□□□ 0.68
HDAC4-211ENST00000494800 ANKRD54Q6NXT1 300 aa19.3■□□□□ 0.68
HDAC4-211ENST00000494800 FUT10Q6P4F1 479 aa19.3■□□□□ 0.68
HDAC4-211ENST00000494800 ELMSAN1Q6PJG2 1045 aa19.3■□□□□ 0.68
HDAC4-211ENST00000494800 VN1R2Q8NFZ6 395 aa19.3■□□□□ 0.68
HDAC4-211ENST00000494800 DDX12PQ92771 950 aa19.3■□□□□ 0.68
HDAC4-211ENST00000494800 UROC1Q96N76 676 aa19.3■□□□□ 0.68
HDAC4-211ENST00000494800 PANK2Q9BZ23 570 aa19.3■□□□□ 0.68
HDAC4-211ENST00000494800 CUEDC2Q9H467 287 aa19.3■□□□□ 0.68
HDAC4-211ENST00000494800 DZANK1Q9NVP4 752 aa19.3■□□□□ 0.68
HDAC4-211ENST00000494800 SEL1LQ9UBV2 794 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms