RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 REXO2Q9Y3B8 237 aaKnown RBP7□□□□□ -1.29
NCL-210ENST00000494618 HS3ST3A1Q9Y663 406 aa7□□□□□ -1.29
NCL-210ENST00000494618 TRIM24O15164 1050 aa6.99□□□□□ -1.29
NCL-210ENST00000494618 PJA2O43164 708 aa6.99□□□□□ -1.29
NCL-210ENST00000494618 ADCY6O43306 1168 aa6.99□□□□□ -1.29
NCL-210ENST00000494618 SNRPA1P09661 255 aaKnown RBP6.99□□□□□ -1.29
NCL-210ENST00000494618 RBP3P10745 1247 aa6.99□□□□□ -1.29
NCL-210ENST00000494618 SREBF1P36956 1147 aa6.99□□□□□ -1.29
NCL-210ENST00000494618 ABHD18Q0P651 414 aa6.99□□□□□ -1.29
NCL-210ENST00000494618 SP140Q13342 867 aa6.99□□□□□ -1.29
NCL-210ENST00000494618 BMT2Q1RMZ1 405 aa6.99□□□□□ -1.29
NCL-210ENST00000494618 PPM1NQ8N819 430 aa6.99□□□□□ -1.29
NCL-210ENST00000494618 REPS2Q8NFH8 660 aa6.99□□□□□ -1.29
NCL-210ENST00000494618 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.99□□□□□ -1.29
NCL-210ENST00000494618 DCLRE1CQ96SD1 692 aaKnown RBP6.99□□□□□ -1.29
NCL-210ENST00000494618 CCDC8Q9H0W5 538 aaPredicted RBP6.99□□□□□ -1.29
NCL-210ENST00000494618 MANSC1Q9H8J5 431 aa6.99□□□□□ -1.29
NCL-210ENST00000494618 TMEM140Q9NV12 185 aa6.99□□□□□ -1.29
NCL-210ENST00000494618 WASHC2CQ9Y4E1 1318 aa6.99□□□□□ -1.29
NCL-210ENST00000494618 CYR61O00622 381 aa6.98□□□□□ -1.29
NCL-210ENST00000494618 XPOTO43592 962 aaKnown RBP6.98□□□□□ -1.29
NCL-210ENST00000494618 FAM20BO75063 409 aa6.98□□□□□ -1.29
NCL-210ENST00000494618 PPFIA4O75335 1185 aa6.98□□□□□ -1.29
NCL-210ENST00000494618 SCAF4O95104 1147 aaKnown RBP6.98□□□□□ -1.29
NCL-210ENST00000494618 ZNF202O95125 648 aa6.98□□□□□ -1.29
NCL-210ENST00000494618 MAKP20794 623 aa6.98□□□□□ -1.29
NCL-210ENST00000494618 PTGS2P35354 604 aa6.98□□□□□ -1.29
NCL-210ENST00000494618 SLC16A1P53985 500 aa6.98□□□□□ -1.29
NCL-210ENST00000494618 CLRN1P58418 232 aa6.98□□□□□ -1.29
NCL-210ENST00000494618 ABCB5Q2M3G0 1257 aa6.98□□□□□ -1.29
NCL-210ENST00000494618 RRP12Q5JTH9 1297 aaKnown RBP6.98□□□□□ -1.29
NCL-210ENST00000494618 MFSD14BQ5SR56 506 aa6.98□□□□□ -1.29
NCL-210ENST00000494618 ANKS6Q68DC2 871 aa6.98□□□□□ -1.29
NCL-210ENST00000494618 Q8N1X5 172 aa6.98□□□□□ -1.29
NCL-210ENST00000494618 CPT1CQ8TCG5 803 aa6.98□□□□□ -1.29
NCL-210ENST00000494618 ZNF483Q8TF39 744 aaPredicted RBP6.98□□□□□ -1.29
NCL-210ENST00000494618 SLC25A43Q8WUT9 341 aaPredicted RBP6.98□□□□□ -1.29
NCL-210ENST00000494618 FUBP3Q96I24 572 aaKnown RBP eCLIP6.98□□□□□ -1.29
NCL-210ENST00000494618 C7orf25Q9BPX7 421 aa6.98□□□□□ -1.29
NCL-210ENST00000494618 HOMER2Q9NSB8 354 aa6.98□□□□□ -1.29
NCL-210ENST00000494618 DIRC3C9JPN6 131 aa6.97□□□□□ -1.29
NCL-210ENST00000494618 TEX33O43247 280 aa6.97□□□□□ -1.29
NCL-210ENST00000494618 CCND1P24385 295 aa6.97□□□□□ -1.29
NCL-210ENST00000494618 ACVRL1P37023 503 aa6.97□□□□□ -1.29
NCL-210ENST00000494618 KRT85P78386 507 aa6.97□□□□□ -1.29
NCL-210ENST00000494618 PNMA8AQ86V59 439 aaPredicted RBP6.97□□□□□ -1.29
NCL-210ENST00000494618 FAM177A1Q8N128 213 aaPredicted RBP6.97□□□□□ -1.29
NCL-210ENST00000494618 SYNE4Q8N205 404 aa6.97□□□□□ -1.29
NCL-210ENST00000494618 SLC16A11Q8NCK7 471 aa6.97□□□□□ -1.29
NCL-210ENST00000494618 OR10H5Q8NGA6 315 aa6.97□□□□□ -1.29
NCL-210ENST00000494618 JADE3Q92613 823 aa6.97□□□□□ -1.29
NCL-210ENST00000494618 HOXB13Q92826 284 aaPredicted RBP6.97□□□□□ -1.29
NCL-210ENST00000494618 KCNH6Q9H252 994 aa6.97□□□□□ -1.29
NCL-210ENST00000494618 INTUQ9ULD6 942 aa6.97□□□□□ -1.29
NCL-210ENST00000494618 NOP58Q9Y2X3 529 aaKnown RBP6.97□□□□□ -1.29
NCL-210ENST00000494618 SPEF1Q9Y4P9 236 aa6.97□□□□□ -1.29
NCL-210ENST00000494618 CXorf49A8MYA2 514 aaPredicted RBP6.96□□□□□ -1.3
NCL-210ENST00000494618 GABRDO14764 452 aa6.96□□□□□ -1.3
NCL-210ENST00000494618 NARSO43776 548 aaKnown RBP6.96□□□□□ -1.3
NCL-210ENST00000494618 NDUFS2O75306 463 aa6.96□□□□□ -1.3
NCL-210ENST00000494618 RAP2AP10114 183 aa6.96□□□□□ -1.3
NCL-210ENST00000494618 ALOX15P16050 662 aaPredicted RBP6.96□□□□□ -1.3
NCL-210ENST00000494618 SLC25A3Q00325 362 aa6.96□□□□□ -1.3
NCL-210ENST00000494618 PTPN21Q16825 1174 aa6.96□□□□□ -1.3
NCL-210ENST00000494618 ATXN7L2Q5T6C5 722 aaPredicted RBP6.96□□□□□ -1.3
NCL-210ENST00000494618 MIGA2Q7L4E1 593 aa6.96□□□□□ -1.3
NCL-210ENST00000494618 ZNF276Q8N554 614 aa6.96□□□□□ -1.3
NCL-210ENST00000494618 FBXO18Q8NFZ0 1043 aa6.96□□□□□ -1.3
NCL-210ENST00000494618 NRG4Q8WWG1 115 aa6.96□□□□□ -1.3
NCL-210ENST00000494618 CASKIN2Q8WXE0 1202 aa6.96□□□□□ -1.3
NCL-210ENST00000494618 HAS1Q92839 578 aa6.96□□□□□ -1.3
NCL-210ENST00000494618 KRTAP4-11Q9BYQ6 195 aa6.96□□□□□ -1.3
NCL-210ENST00000494618 SLC2A4RGQ9NR83 387 aa6.96□□□□□ -1.3
NCL-210ENST00000494618 SHROOM4Q9ULL8 1493 aa6.96□□□□□ -1.3
NCL-210ENST00000494618 GRXCR1A8MXD5 290 aa6.95□□□□□ -1.3
NCL-210ENST00000494618 ADH4P08319 380 aa6.95□□□□□ -1.3
NCL-210ENST00000494618 SPATA31D3P0C874 917 aa6.95□□□□□ -1.3
NCL-210ENST00000494618 APOBEC3AP31941 199 aaPredicted RBP6.95□□□□□ -1.3
NCL-210ENST00000494618 GUCY1A2P33402 732 aa6.95□□□□□ -1.3
NCL-210ENST00000494618 WASP42768 502 aa6.95□□□□□ -1.3
NCL-210ENST00000494618 NHLH2Q02577 135 aa6.95□□□□□ -1.3
NCL-210ENST00000494618 SEPT2Q15019 361 aa6.95□□□□□ -1.3
NCL-210ENST00000494618 AFMIDQ63HM1 303 aa6.95□□□□□ -1.3
NCL-210ENST00000494618 SPATA31D4Q6ZUB0 917 aa6.95□□□□□ -1.3
NCL-210ENST00000494618 SLC35B2Q8TB61 432 aa6.95□□□□□ -1.3
NCL-210ENST00000494618 CCHCR1Q8TD31 782 aa6.95□□□□□ -1.3
NCL-210ENST00000494618 STON2Q8WXE9 905 aa6.95□□□□□ -1.3
NCL-210ENST00000494618 MRI1Q9BV20 369 aa6.95□□□□□ -1.3
NCL-210ENST00000494618 LDAHQ9H6V9 325 aa6.95□□□□□ -1.3
NCL-210ENST00000494618 NRDE2Q9H7Z3 1164 aa6.95□□□□□ -1.3
NCL-210ENST00000494618 MMRN2Q9H8L6 949 aa6.95□□□□□ -1.3
NCL-210ENST00000494618 TRPM5Q9NZQ8 1165 aa6.95□□□□□ -1.3
NCL-210ENST00000494618 AJAP1Q9UKB5 411 aaPredicted RBP6.95□□□□□ -1.3
NCL-210ENST00000494618 AKAP8O43823 692 aaKnown RBP6.94□□□□□ -1.3
NCL-210ENST00000494618 RPS6KA4O75676 772 aa6.94□□□□□ -1.3
NCL-210ENST00000494618 ATP5JP18859 108 aa6.94□□□□□ -1.3
NCL-210ENST00000494618 PCBP2Q15366 365 aaKnown RBP eCLIP6.94□□□□□ -1.3
NCL-210ENST00000494618 ATP2B3Q16720 1220 aa6.94□□□□□ -1.3
NCL-210ENST00000494618 FNDC7Q5VTL7 733 aa6.94□□□□□ -1.3
NCL-210ENST00000494618 EFCAB2Q5VUJ9 269 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms