RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 CACNG4Q9UBN1 327 aa36.49■■■■□ 3.43
CBX4-203ENST00000494546 KCNG1Q9UIX4 513 aa36.49■■■■□ 3.43
CBX4-203ENST00000494546 PTGESO14684 152 aa36.48■■■■□ 3.43
CBX4-203ENST00000494546 URODP06132 367 aa36.48■■■■□ 3.43
CBX4-203ENST00000494546 TUSC3Q13454 348 aa36.48■■■■□ 3.43
CBX4-203ENST00000494546 SPECC1Q5M775 1068 aa36.48■■■■□ 3.43
CBX4-203ENST00000494546 HSCBQ8IWL3 235 aa36.48■■■■□ 3.43
CBX4-203ENST00000494546 NTPCRQ9BSD7 190 aaKnown RBP36.48■■■■□ 3.43
CBX4-203ENST00000494546 THP07101 528 aa36.47■■■■□ 3.43
CBX4-203ENST00000494546 EPCAMP16422 314 aa36.47■■■■□ 3.43
CBX4-203ENST00000494546 ZNF568Q3ZCX4 644 aa36.47■■■■□ 3.43
CBX4-203ENST00000494546 SUSD6Q92537 303 aa36.47■■■■□ 3.43
CBX4-203ENST00000494546 KLHL5Q96PQ7 755 aa36.47■■■■□ 3.43
CBX4-203ENST00000494546 BLOC1S4Q9NUP1 217 aa36.47■■■■□ 3.43
CBX4-203ENST00000494546 DAXXQ9UER7 740 aaPredicted RBP36.47■■■■□ 3.43
CBX4-203ENST00000494546 FBXO2Q9UK22 296 aaPredicted RBP36.47■■■■□ 3.43
CBX4-203ENST00000494546 CASTOR2A6NHX0 329 aa36.46■■■■□ 3.43
CBX4-203ENST00000494546 CNPP09543 421 aaKnown RBP36.46■■■■□ 3.43
CBX4-203ENST00000494546 STRN3Q13033 797 aa36.46■■■■□ 3.43
CBX4-203ENST00000494546 MCM6Q14566 821 aa36.46■■■■□ 3.43
CBX4-203ENST00000494546 TPRNQ4KMQ1 711 aa36.46■■■■□ 3.43
CBX4-203ENST00000494546 ZBTB33Q86T24 672 aa36.46■■■■□ 3.43
CBX4-203ENST00000494546 RAD54LQ92698 747 aa36.46■■■■□ 3.43
CBX4-203ENST00000494546 EPSTI1Q96J88 318 aa36.46■■■■□ 3.43
CBX4-203ENST00000494546 REEP2Q9BRK0 252 aa36.46■■■■□ 3.43
CBX4-203ENST00000494546 TCHPQ9BT92 498 aa36.46■■■■□ 3.43
CBX4-203ENST00000494546 C1QTNF1Q9BXJ1 281 aa36.46■■■■□ 3.43
CBX4-203ENST00000494546 CCSER1Q9C0I3 900 aa36.46■■■■□ 3.43
CBX4-203ENST00000494546 CDT1Q9H211 546 aa36.46■■■■□ 3.43
CBX4-203ENST00000494546 ZSCAN16Q9H4T2 348 aaPredicted RBP36.46■■■■□ 3.43
CBX4-203ENST00000494546 LILRB3O75022 631 aa36.45■■■■□ 3.43
CBX4-203ENST00000494546 KLRC2P26717 231 aa36.45■■■■□ 3.43
CBX4-203ENST00000494546 GLUD2P49448 558 aa36.45■■■■□ 3.43
CBX4-203ENST00000494546 HSP90AA2PQ14568 343 aaPredicted RBP36.45■■■■□ 3.43
CBX4-203ENST00000494546 PPFIBP1Q86W92 1011 aa36.45■■■■□ 3.43
CBX4-203ENST00000494546 RNF168Q8IYW5 571 aaPredicted RBP36.45■■■■□ 3.43
CBX4-203ENST00000494546 TMEM161BQ8NDZ6 487 aa36.45■■■■□ 3.43
CBX4-203ENST00000494546 SLC22A17Q8WUG5 538 aa36.45■■■■□ 3.43
CBX4-203ENST00000494546 PAAF1Q9BRP4 392 aa36.45■■■■□ 3.43
CBX4-203ENST00000494546 PTPRHQ9HD43 1115 aa36.45■■■■□ 3.43
CBX4-203ENST00000494546 LARSQ9P2J5 1176 aaKnown RBP36.45■■■■□ 3.43
CBX4-203ENST00000494546 ADAM28Q9UKQ2 775 aa36.45■■■■□ 3.43
CBX4-203ENST00000494546 SSX2IPQ9Y2D8 614 aa36.45■■■■□ 3.43
CBX4-203ENST00000494546 SRPRBQ9Y5M8 271 aaKnown RBP36.45■■■■□ 3.43
CBX4-203ENST00000494546 EFEMP2O95967 443 aa36.44■■■■□ 3.42
CBX4-203ENST00000494546 OSTNP61366 133 aa36.44■■■■□ 3.42
CBX4-203ENST00000494546 KIAA1841Q6NSI8 718 aa36.44■■■■□ 3.42
CBX4-203ENST00000494546 FUT10Q6P4F1 479 aa36.44■■■■□ 3.42
CBX4-203ENST00000494546 USP49Q70CQ1 688 aa36.44■■■■□ 3.42
CBX4-203ENST00000494546 CEP120Q8N960 986 aa36.44■■■■□ 3.42
CBX4-203ENST00000494546 CLIC6Q96NY7 704 aa36.44■■■■□ 3.42
CBX4-203ENST00000494546 USP28Q96RU2 1077 aa36.44■■■■□ 3.42
CBX4-203ENST00000494546 PHF7Q9BWX1 381 aaPredicted RBP36.44■■■■□ 3.42
CBX4-203ENST00000494546 GPR62Q9BZJ7 368 aa36.44■■■■□ 3.42
CBX4-203ENST00000494546 ODF2LQ9ULJ1 636 aa36.44■■■■□ 3.42
CBX4-203ENST00000494546 PI4K2BG5E9Z4 385 aa36.43■■■■□ 3.42
CBX4-203ENST00000494546 TADA2AO75478 443 aa36.43■■■■□ 3.42
CBX4-203ENST00000494546 KRT18P05783 430 aaKnown RBP36.43■■■■□ 3.42
CBX4-203ENST00000494546 MAPTP10636 758 aaKnown RBP36.43■■■■□ 3.42
CBX4-203ENST00000494546 CBX2Q14781 532 aaPredicted RBP36.43■■■■□ 3.42
CBX4-203ENST00000494546 GLRA4Q5JXX5 417 aa36.43■■■■□ 3.42
CBX4-203ENST00000494546 B3GALT6Q96L58 329 aa36.43■■■■□ 3.42
CBX4-203ENST00000494546 CCDC94Q9BW85 323 aaPredicted RBP36.43■■■■□ 3.42
CBX4-203ENST00000494546 DZANK1Q9NVP4 752 aa36.43■■■■□ 3.42
CBX4-203ENST00000494546 HSP90AA1P07900 732 aaKnown RBP36.42■■■■□ 3.42
CBX4-203ENST00000494546 HARSP12081 509 aaKnown RBP36.42■■■■□ 3.42
CBX4-203ENST00000494546 GRM5P41594 1212 aa36.42■■■■□ 3.42
CBX4-203ENST00000494546 MPZL3Q6UWV2 235 aa36.42■■■■□ 3.42
CBX4-203ENST00000494546 C12orf76Q8N812 135 aaPredicted RBP36.42■■■■□ 3.42
CBX4-203ENST00000494546 HASPINQ8TF76 798 aa36.42■■■■□ 3.42
CBX4-203ENST00000494546 LARP4BQ92615 738 aaKnown RBP36.42■■■■□ 3.42
CBX4-203ENST00000494546 RPGRIP1Q96KN7 1286 aa36.42■■■■□ 3.42
CBX4-203ENST00000494546 CDH22Q9UJ99 828 aa36.42■■■■□ 3.42
CBX4-203ENST00000494546 FAM13AO94988 1023 aa36.41■■■■□ 3.42
CBX4-203ENST00000494546 YARSP54577 528 aaKnown RBP36.41■■■■□ 3.42
CBX4-203ENST00000494546 DSG1Q02413 1049 aa36.41■■■■□ 3.42
CBX4-203ENST00000494546 NAB2Q15742 525 aa36.41■■■■□ 3.42
CBX4-203ENST00000494546 RARS2Q5T160 578 aaKnown RBP36.41■■■■□ 3.42
CBX4-203ENST00000494546 KIAA0319Q5VV43 1072 aa36.41■■■■□ 3.42
CBX4-203ENST00000494546 CES5AQ6NT32 575 aa36.41■■■■□ 3.42
CBX4-203ENST00000494546 ZBTB45Q96K62 511 aaPredicted RBP36.41■■■■□ 3.42
CBX4-203ENST00000494546 ADAM7Q9H2U9 754 aa36.41■■■■□ 3.42
CBX4-203ENST00000494546 ANKFY1Q9P2R3 1169 aa36.41■■■■□ 3.42
CBX4-203ENST00000494546 CCDC39Q9UFE4 941 aa36.41■■■■□ 3.42
CBX4-203ENST00000494546 MCF2P10911 925 aa36.4■■■■□ 3.42
CBX4-203ENST00000494546 PROZP22891 400 aa36.4■■■■□ 3.42
CBX4-203ENST00000494546 ITIH3Q06033 890 aa36.4■■■■□ 3.42
CBX4-203ENST00000494546 MYCT1Q8N699 235 aa36.4■■■■□ 3.42
CBX4-203ENST00000494546 ZHX3Q9H4I2 956 aa36.4■■■■□ 3.42
CBX4-203ENST00000494546 TOPORSQ9NS56 1045 aaPredicted RBP36.4■■■■□ 3.42
CBX4-203ENST00000494546 CHST7Q9NS84 486 aa36.4■■■■□ 3.42
CBX4-203ENST00000494546 C5orf42Q9H799 3197 aa36.4■■■■□ 3.42
CBX4-203ENST00000494546 MYH11P35749 1972 aa36.4■■■■□ 3.42
CBX4-203ENST00000494546 SPDYE4A6NLX3 237 aa36.39■■■■□ 3.42
CBX4-203ENST00000494546 H0YCG3 227 aa36.39■■■■□ 3.42
CBX4-203ENST00000494546 KIF4AO95239 1232 aa36.39■■■■□ 3.42
CBX4-203ENST00000494546 ALADP13716 330 aa36.39■■■■□ 3.42
CBX4-203ENST00000494546 DDIT3P35638 169 aa36.39■■■■□ 3.42
CBX4-203ENST00000494546 CLCN4P51793 760 aa36.39■■■■□ 3.42
CBX4-203ENST00000494546 NCKAP1LP55160 1127 aa36.39■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms