RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 CMASQ8NFW8 434 aaPredicted RBP14.01□□□□□ -0.17
SKA1-205ENST00000494518 ZNF707Q96C28 371 aaPredicted RBP14.01□□□□□ -0.17
SKA1-205ENST00000494518 MTMR9Q96QG7 549 aa14.01□□□□□ -0.17
SKA1-205ENST00000494518 CXCL16Q9H2A7 254 aa14.01□□□□□ -0.17
SKA1-205ENST00000494518 WDR6Q9NNW5 1121 aaKnown RBP14.01□□□□□ -0.17
SKA1-205ENST00000494518 ADAM28Q9UKQ2 775 aa14.01□□□□□ -0.17
SKA1-205ENST00000494518 CA14Q9ULX7 337 aa14.01□□□□□ -0.17
SKA1-205ENST00000494518 SSX2IPQ9Y2D8 614 aa14.01□□□□□ -0.17
SKA1-205ENST00000494518 CACNA1IQ9P0X4 2223 aa14□□□□□ -0.17
SKA1-205ENST00000494518 MIA3Q5JRA6 1907 aa14□□□□□ -0.17
SKA1-205ENST00000494518 STK25O00506 426 aa14□□□□□ -0.17
SKA1-205ENST00000494518 MED24O75448 989 aa14□□□□□ -0.17
SKA1-205ENST00000494518 TADA2AO75478 443 aa14□□□□□ -0.17
SKA1-205ENST00000494518 CLCN5P51795 746 aa14□□□□□ -0.17
SKA1-205ENST00000494518 NUBP1P53384 320 aa14□□□□□ -0.17
SKA1-205ENST00000494518 ANAPC15P60006 121 aa14□□□□□ -0.17
SKA1-205ENST00000494518 ST3GAL1Q11201 340 aa14□□□□□ -0.17
SKA1-205ENST00000494518 GRIK3Q13003 919 aa14□□□□□ -0.17
SKA1-205ENST00000494518 PCBP1Q15365 356 aaKnown RBP eCLIP14□□□□□ -0.17
SKA1-205ENST00000494518 USP41Q3LFD5 358 aa14□□□□□ -0.17
SKA1-205ENST00000494518 RTP2Q5QGT7 225 aa14□□□□□ -0.17
SKA1-205ENST00000494518 POTEGQ6S5H5 508 aa14□□□□□ -0.17
SKA1-205ENST00000494518 BSNDQ8WZ55 320 aa14□□□□□ -0.17
SKA1-205ENST00000494518 POLD4Q9HCU8 107 aa14□□□□□ -0.17
SKA1-205ENST00000494518 CHST7Q9NS84 486 aa14□□□□□ -0.17
SKA1-205ENST00000494518 SNTG2Q9NY99 539 aa14□□□□□ -0.17
SKA1-205ENST00000494518 COL4A3Q01955 1670 aa13.99□□□□□ -0.17
SKA1-205ENST00000494518 A0A1B0GUA9 196 aa13.99□□□□□ -0.17
SKA1-205ENST00000494518 PRR23AA6NEV1 266 aa13.99□□□□□ -0.17
SKA1-205ENST00000494518 EDN1P05305 212 aa13.99□□□□□ -0.17
SKA1-205ENST00000494518 SPATA31C1P0DKV0 1188 aa13.99□□□□□ -0.17
SKA1-205ENST00000494518 AOC1P19801 751 aa13.99□□□□□ -0.17
SKA1-205ENST00000494518 RFX1P22670 979 aa13.99□□□□□ -0.17
SKA1-205ENST00000494518 NEK4P51957 841 aa13.99□□□□□ -0.17
SKA1-205ENST00000494518 POU5F1BQ06416 359 aa13.99□□□□□ -0.17
SKA1-205ENST00000494518 HSP90AA2PQ14568 343 aaPredicted RBP13.99□□□□□ -0.17
SKA1-205ENST00000494518 ELMSAN1Q6PJG2 1045 aa13.99□□□□□ -0.17
SKA1-205ENST00000494518 CATSPER3Q86XQ3 398 aa13.99□□□□□ -0.17
SKA1-205ENST00000494518 CEP57Q86XR8 500 aa13.99□□□□□ -0.17
SKA1-205ENST00000494518 STAMQ92783 540 aa13.99□□□□□ -0.17
SKA1-205ENST00000494518 NFKBIZQ9BYH8 718 aa13.99□□□□□ -0.17
SKA1-205ENST00000494518 NT5C3AQ9H0P0 336 aa13.99□□□□□ -0.17
SKA1-205ENST00000494518 PDZD7Q9H5P4 517 aa13.99□□□□□ -0.17
SKA1-205ENST00000494518 IGSF9Q9P2J2 1179 aa13.99□□□□□ -0.17
SKA1-205ENST00000494518 ZNF292O60281 2723 aa13.99□□□□□ -0.17
SKA1-205ENST00000494518 CITO14578 2027 aa13.98□□□□□ -0.17
SKA1-205ENST00000494518 NOTCH4Q99466 2003 aa13.98□□□□□ -0.17
SKA1-205ENST00000494518 KRBA1A5PL33 1030 aa13.98□□□□□ -0.17
SKA1-205ENST00000494518 PROB1E7EW31 1015 aa13.98□□□□□ -0.17
SKA1-205ENST00000494518 RECQL4O94761 1208 aa13.98□□□□□ -0.17
SKA1-205ENST00000494518 KIF4AO95239 1232 aa13.98□□□□□ -0.17
SKA1-205ENST00000494518 NBL1P41271 181 aa13.98□□□□□ -0.17
SKA1-205ENST00000494518 NTHL1P78549 312 aa13.98□□□□□ -0.17
SKA1-205ENST00000494518 ZNF174Q15697 407 aa13.98□□□□□ -0.17
SKA1-205ENST00000494518 EEF1DP3Q658K8 133 aa13.98□□□□□ -0.17
SKA1-205ENST00000494518 NOSTRINQ8IVI9 506 aa13.98□□□□□ -0.17
SKA1-205ENST00000494518 ZBTB8OSQ8IWT0 167 aa13.98□□□□□ -0.17
SKA1-205ENST00000494518 CCDC105Q8IYK2 499 aa13.98□□□□□ -0.17
SKA1-205ENST00000494518 KIFC3Q9BVG8 833 aa13.98□□□□□ -0.17
SKA1-205ENST00000494518 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.98□□□□□ -0.17
SKA1-205ENST00000494518 PRMT7Q9NVM4 692 aaPredicted RBP13.98□□□□□ -0.17
SKA1-205ENST00000494518 DPP7Q9UHL4 492 aa13.98□□□□□ -0.17
SKA1-205ENST00000494518 MYH11P35749 1972 aa13.98□□□□□ -0.17
SKA1-205ENST00000494518 SF3B1O75533 1304 aaKnown RBP eCLIP13.97□□□□□ -0.171e-7■■■■■ 172.3
SKA1-205ENST00000494518 PTGESO14684 152 aa13.97□□□□□ -0.17
SKA1-205ENST00000494518 PRKCBP05771 671 aa13.97□□□□□ -0.17
SKA1-205ENST00000494518 NEFLP07196 543 aa13.97□□□□□ -0.17
SKA1-205ENST00000494518 TUSC3Q13454 348 aa13.97□□□□□ -0.17
SKA1-205ENST00000494518 PRPF4BQ13523 1007 aaKnown RBP13.97□□□□□ -0.17
SKA1-205ENST00000494518 ANGPT1Q15389 498 aa13.97□□□□□ -0.17
SKA1-205ENST00000494518 SPECC1Q5M775 1068 aa13.97□□□□□ -0.17
SKA1-205ENST00000494518 FAM171A1Q5VUB5 890 aa13.97□□□□□ -0.17
SKA1-205ENST00000494518 CDCA2Q69YH5 1023 aaPredicted RBP13.97□□□□□ -0.17
SKA1-205ENST00000494518 LILRA6Q6PI73 481 aa13.97□□□□□ -0.17
SKA1-205ENST00000494518 SLC44A3Q8N4M1 653 aa13.97□□□□□ -0.17
SKA1-205ENST00000494518 DTWD2Q8NBA8 298 aa13.97□□□□□ -0.17
SKA1-205ENST00000494518 MCPH1Q8NEM0 835 aa13.97□□□□□ -0.17
SKA1-205ENST00000494518 PRKD2Q9BZL6 878 aa13.97□□□□□ -0.17
SKA1-205ENST00000494518 PLEKHA4Q9H4M7 779 aa13.97□□□□□ -0.17
SKA1-205ENST00000494518 TUFT1Q9NNX1 390 aa13.97□□□□□ -0.17
SKA1-205ENST00000494518 FNIP2Q9P278 1114 aa13.97□□□□□ -0.17
SKA1-205ENST00000494518 EPS15L1Q9UBC2 864 aa13.97□□□□□ -0.17
SKA1-205ENST00000494518 GDAQ9Y2T3 454 aa13.97□□□□□ -0.17
SKA1-205ENST00000494518 ARHGEF35A5YM69 484 aa13.96□□□□□ -0.17
SKA1-205ENST00000494518 N4BP3O15049 544 aa13.96□□□□□ -0.17
SKA1-205ENST00000494518 ADAM12O43184 909 aa13.96□□□□□ -0.17
SKA1-205ENST00000494518 IGFBP6P24592 240 aaPredicted RBP13.96□□□□□ -0.17
SKA1-205ENST00000494518 NBR1Q14596 966 aa13.96□□□□□ -0.17
SKA1-205ENST00000494518 PSMD5Q16401 504 aa13.96□□□□□ -0.17
SKA1-205ENST00000494518 GLRA4Q5JXX5 417 aa13.96□□□□□ -0.17
SKA1-205ENST00000494518 PADI6Q6TGC4 694 aa13.96□□□□□ -0.17
SKA1-205ENST00000494518 GRASPQ7Z6J2 395 aaPredicted RBP13.96□□□□□ -0.17
SKA1-205ENST00000494518 CCDC83Q8IWF9 413 aa13.96□□□□□ -0.17
SKA1-205ENST00000494518 GPR152Q8TDT2 470 aa13.96□□□□□ -0.17
SKA1-205ENST00000494518 PRIMPOLQ96LW4 560 aa13.96□□□□□ -0.17
SKA1-205ENST00000494518 NACC1Q96RE7 527 aa13.96□□□□□ -0.17
SKA1-205ENST00000494518 RTP3Q9BQQ7 232 aa13.96□□□□□ -0.17
SKA1-205ENST00000494518 TTPALQ9BTX7 342 aa13.96□□□□□ -0.17
SKA1-205ENST00000494518 FZD8Q9H461 694 aa13.96□□□□□ -0.17
SKA1-205ENST00000494518 TBC1D17Q9HA65 648 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms