RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 NCK2O43639 380 aa16.14■□□□□ 0.17
ATG4B-224ENST00000494132 CXCL14O95715 111 aa16.14■□□□□ 0.17
ATG4B-224ENST00000494132 MAPTP10636 758 aaKnown RBP16.14■□□□□ 0.17
ATG4B-224ENST00000494132 DDIT3P35638 169 aa16.14■□□□□ 0.17
ATG4B-224ENST00000494132 TXLNAP40222 546 aa16.14■□□□□ 0.17
ATG4B-224ENST00000494132 SMTNP53814 917 aa16.14■□□□□ 0.17
ATG4B-224ENST00000494132 GRIK3Q13003 919 aa16.14■□□□□ 0.17
ATG4B-224ENST00000494132 DCAF4L1Q3SXM0 396 aa16.14■□□□□ 0.17
ATG4B-224ENST00000494132 SEZ6Q53EL9 994 aa16.14■□□□□ 0.17
ATG4B-224ENST00000494132 RRAGBQ5VZM2 374 aa16.14■□□□□ 0.17
ATG4B-224ENST00000494132 PDE12Q6L8Q7 609 aaKnown RBP16.14■□□□□ 0.17
ATG4B-224ENST00000494132 PDILTQ8N807 584 aa16.14■□□□□ 0.17
ATG4B-224ENST00000494132 HASPINQ8TF76 798 aa16.14■□□□□ 0.17
ATG4B-224ENST00000494132 SPIRE2Q8WWL2 714 aa16.14■□□□□ 0.17
ATG4B-224ENST00000494132 CHAMP1Q96JM3 812 aa16.14■□□□□ 0.17
ATG4B-224ENST00000494132 TCHPQ9BT92 498 aa16.14■□□□□ 0.17
ATG4B-224ENST00000494132 NGRNQ9NPE2 291 aaKnown RBP16.14■□□□□ 0.17
ATG4B-224ENST00000494132 LARSQ9P2J5 1176 aaKnown RBP16.14■□□□□ 0.17
ATG4B-224ENST00000494132 ANKFY1Q9P2R3 1169 aa16.14■□□□□ 0.17
ATG4B-224ENST00000494132 ODF2LQ9ULJ1 636 aa16.14■□□□□ 0.17
ATG4B-224ENST00000494132 RBM19Q9Y4C8 960 aaKnown RBP16.14■□□□□ 0.17
ATG4B-224ENST00000494132 MTCL1Q9Y4B5 1905 aaKnown RBP16.13■□□□□ 0.17
ATG4B-224ENST00000494132 C2orf16Q68DN1 1984 aa16.13■□□□□ 0.17
ATG4B-224ENST00000494132 GRXCR2A6NFK2 248 aa16.13■□□□□ 0.17
ATG4B-224ENST00000494132 C2CD2LO14523 706 aa16.13■□□□□ 0.17
ATG4B-224ENST00000494132 TBCAO75347 108 aaKnown RBP16.13■□□□□ 0.17
ATG4B-224ENST00000494132 CTSAP10619 480 aa16.13■□□□□ 0.17
ATG4B-224ENST00000494132 NCKAP1LP55160 1127 aa16.13■□□□□ 0.17
ATG4B-224ENST00000494132 STRN3Q13033 797 aa16.13■□□□□ 0.17
ATG4B-224ENST00000494132 TAS1R1Q7RTX1 841 aa16.13■□□□□ 0.17
ATG4B-224ENST00000494132 HAUS6Q7Z4H7 955 aa16.13■□□□□ 0.17
ATG4B-224ENST00000494132 MRPL43Q8N983 215 aaKnown RBP16.13■□□□□ 0.17
ATG4B-224ENST00000494132 MSLNLQ96KJ4 702 aa16.13■□□□□ 0.17
ATG4B-224ENST00000494132 B3GALT6Q96L58 329 aa16.13■□□□□ 0.17
ATG4B-224ENST00000494132 PARVGQ9HBI0 331 aa16.13■□□□□ 0.17
ATG4B-224ENST00000494132 PTPRHQ9HD43 1115 aa16.13■□□□□ 0.17
ATG4B-224ENST00000494132 CD207Q9UJ71 328 aa16.13■□□□□ 0.17
ATG4B-224ENST00000494132 TNFRSF10AO00220 468 aa16.12■□□□□ 0.17
ATG4B-224ENST00000494132 ABLIM1O14639 778 aa16.12■□□□□ 0.17
ATG4B-224ENST00000494132 MBTPS2O43462 519 aa16.12■□□□□ 0.17
ATG4B-224ENST00000494132 CLASP2O75122 1294 aaKnown RBP16.12■□□□□ 0.17
ATG4B-224ENST00000494132 NMT1P30419 496 aaKnown RBP16.12■□□□□ 0.17
ATG4B-224ENST00000494132 STAT6P42226 847 aa16.12■□□□□ 0.17
ATG4B-224ENST00000494132 MATR3P43243 847 aaKnown RBP eCLIP16.12■□□□□ 0.17
ATG4B-224ENST00000494132 DNM1Q05193 864 aaKnown RBP16.12■□□□□ 0.17
ATG4B-224ENST00000494132 PTPN14Q15678 1187 aa16.12■□□□□ 0.17
ATG4B-224ENST00000494132 STAMQ92783 540 aa16.12■□□□□ 0.17
ATG4B-224ENST00000494132 BICD1Q96G01 975 aa16.12■□□□□ 0.17
ATG4B-224ENST00000494132 NTPCRQ9BSD7 190 aaKnown RBP16.12■□□□□ 0.17
ATG4B-224ENST00000494132 CD320Q9NPF0 282 aa16.12■□□□□ 0.17
ATG4B-224ENST00000494132 STK17AQ9UEE5 414 aa16.12■□□□□ 0.17
ATG4B-224ENST00000494132 CDH22Q9UJ99 828 aa16.12■□□□□ 0.17
ATG4B-224ENST00000494132 C5orf42Q9H799 3197 aa16.12■□□□□ 0.17
ATG4B-224ENST00000494132 MYMKA6NI61 221 aa16.11■□□□□ 0.17
ATG4B-224ENST00000494132 TRAK2O60296 914 aa16.11■□□□□ 0.17
ATG4B-224ENST00000494132 THP07101 528 aa16.11■□□□□ 0.17
ATG4B-224ENST00000494132 PROZP22891 400 aa16.11■□□□□ 0.17
ATG4B-224ENST00000494132 ZNF131P52739 623 aa16.11■□□□□ 0.17
ATG4B-224ENST00000494132 TUSC3Q13454 348 aa16.11■□□□□ 0.17
ATG4B-224ENST00000494132 NAB2Q15742 525 aa16.11■□□□□ 0.17
ATG4B-224ENST00000494132 MPZL3Q6UWV2 235 aa16.11■□□□□ 0.17
ATG4B-224ENST00000494132 SFR1Q86XK3 245 aa16.11■□□□□ 0.17
ATG4B-224ENST00000494132 TMEM87AQ8NBN3 555 aa16.11■□□□□ 0.17
ATG4B-224ENST00000494132 FIZ1Q96SL8 496 aa16.11■□□□□ 0.17
ATG4B-224ENST00000494132 CDCA3Q99618 268 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-224ENST00000494132 HAPLN2Q9GZV7 340 aa16.11■□□□□ 0.17
ATG4B-224ENST00000494132 GOLGA2P5Q9HBQ8 144 aa16.11■□□□□ 0.17
ATG4B-224ENST00000494132 HCFC2Q9Y5Z7 792 aa16.11■□□□□ 0.17
ATG4B-224ENST00000494132 MORC2Q9Y6X9 1032 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-224ENST00000494132 ZMYM2Q9UBW7 1377 aa16.11■□□□□ 0.17
ATG4B-224ENST00000494132 CARNS1A5YM72 827 aa16.1■□□□□ 0.17
ATG4B-224ENST00000494132 PPP6R2O75170 966 aa16.1■□□□□ 0.17
ATG4B-224ENST00000494132 NR1I2O75469 434 aa16.1■□□□□ 0.17
ATG4B-224ENST00000494132 YEATS4O95619 227 aa16.1■□□□□ 0.17
ATG4B-224ENST00000494132 SOD2P04179 222 aa16.1■□□□□ 0.17
ATG4B-224ENST00000494132 MYBP10242 640 aa16.1■□□□□ 0.17
ATG4B-224ENST00000494132 EPCAMP16422 314 aa16.1■□□□□ 0.17
ATG4B-224ENST00000494132 IGFBP6P24592 240 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-224ENST00000494132 GRM5P41594 1212 aa16.1■□□□□ 0.17
ATG4B-224ENST00000494132 SMAD4Q13485 552 aaKnown RBP16.1■□□□□ 0.17
ATG4B-224ENST00000494132 KCNC3Q14003 757 aa16.1■□□□□ 0.17
ATG4B-224ENST00000494132 BMS1Q14692 1282 aaKnown RBP16.1■□□□□ 0.17
ATG4B-224ENST00000494132 NOLC1Q14978 699 aaKnown RBP eCLIP16.1■□□□□ 0.17
ATG4B-224ENST00000494132 ZC2HC1CQ53FD0 456 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-224ENST00000494132 FUT10Q6P4F1 479 aa16.1■□□□□ 0.17
ATG4B-224ENST00000494132 SHC4Q6S5L8 630 aa16.1■□□□□ 0.17
ATG4B-224ENST00000494132 CCDC73Q6ZRK6 1079 aa16.1■□□□□ 0.17
ATG4B-224ENST00000494132 SV2BQ7L1I2 683 aa16.1■□□□□ 0.17
ATG4B-224ENST00000494132 APBB1IPQ7Z5R6 666 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-224ENST00000494132 FAM178BQ8IXR5 827 aa16.1■□□□□ 0.17
ATG4B-224ENST00000494132 TMEM130Q8N3G9 435 aa16.1■□□□□ 0.17
ATG4B-224ENST00000494132 FEZF2Q8TBJ5 459 aa16.1■□□□□ 0.17
ATG4B-224ENST00000494132 DDX12PQ92771 950 aa16.1■□□□□ 0.17
ATG4B-224ENST00000494132 HERC2P3Q9BVR0 1158 aa16.1■□□□□ 0.17
ATG4B-224ENST00000494132 CCDC94Q9BW85 323 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-224ENST00000494132 COLEC11Q9BWP8 271 aa16.1■□□□□ 0.17
ATG4B-224ENST00000494132 GPR62Q9BZJ7 368 aa16.1■□□□□ 0.17
ATG4B-224ENST00000494132 TBC1D7Q9P0N9 293 aa16.1■□□□□ 0.17
ATG4B-224ENST00000494132 DOCK6Q96HP0 2047 aa16.09■□□□□ 0.17
ATG4B-224ENST00000494132 TISP43B9A030 160 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms