RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 NECTIN4Q96NY8 510 aa10.75□□□□□ -0.69
UFD1-210ENST00000494054 TSHZ2Q9NRE2 1034 aa10.75□□□□□ -0.69
UFD1-210ENST00000494054 GDAQ9Y2T3 454 aa10.75□□□□□ -0.69
UFD1-210ENST00000494054 HCN4Q9Y3Q4 1203 aa10.75□□□□□ -0.69
UFD1-210ENST00000494054 TDRD15B5MCY1 1934 aaKnown RBP10.75□□□□□ -0.69
UFD1-210ENST00000494054 VWA3AA6NCI4 1184 aa10.74□□□□□ -0.69
UFD1-210ENST00000494054 CASTOR2A6NHX0 329 aa10.74□□□□□ -0.69
UFD1-210ENST00000494054 TADA2AO75478 443 aa10.74□□□□□ -0.69
UFD1-210ENST00000494054 SPATA31D3P0C874 917 aa10.74□□□□□ -0.69
UFD1-210ENST00000494054 PLA2G5P39877 138 aa10.74□□□□□ -0.69
UFD1-210ENST00000494054 RAD51AP2Q09MP3 1159 aa10.74□□□□□ -0.69
UFD1-210ENST00000494054 TUSC3Q13454 348 aa10.74□□□□□ -0.69
UFD1-210ENST00000494054 HSP90AA2PQ14568 343 aaPredicted RBP10.74□□□□□ -0.69
UFD1-210ENST00000494054 PTPN21Q16825 1174 aa10.74□□□□□ -0.69
UFD1-210ENST00000494054 KIAA1841Q6NSI8 718 aa10.74□□□□□ -0.69
UFD1-210ENST00000494054 SPATA31D4Q6ZUB0 917 aa10.74□□□□□ -0.69
UFD1-210ENST00000494054 GPR149Q86SP6 731 aa10.74□□□□□ -0.69
UFD1-210ENST00000494054 CEP120Q8N960 986 aa10.74□□□□□ -0.69
UFD1-210ENST00000494054 LRRC15Q8TF66 581 aa10.74□□□□□ -0.69
UFD1-210ENST00000494054 ACO2Q99798 780 aaKnown RBP10.74□□□□□ -0.69
UFD1-210ENST00000494054 ADPGKQ9BRR6 497 aa10.74□□□□□ -0.69
UFD1-210ENST00000494054 PTPRHQ9HD43 1115 aa10.74□□□□□ -0.69
UFD1-210ENST00000494054 MAN1C1Q9NR34 630 aa10.74□□□□□ -0.69
UFD1-210ENST00000494054 ADAM28Q9UKQ2 775 aa10.74□□□□□ -0.69
UFD1-210ENST00000494054 TNFSF13BQ9Y275 285 aa10.74□□□□□ -0.69
UFD1-210ENST00000494054 NR2E1Q9Y466 385 aa10.74□□□□□ -0.69
UFD1-210ENST00000494054 ARIH1Q9Y4X5 557 aaPredicted RBP10.74□□□□□ -0.69
UFD1-210ENST00000494054 NPHP3-ACAD11A0A0J9YXS1 232 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 TMEM221A6NGB7 291 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 M0R296 226 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 SLC16A4O15374 487 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 KIF4AO95239 1232 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 THP07101 528 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 RPL17P18621 184 aaKnown RBP10.73□□□□□ -0.69
UFD1-210ENST00000494054 GRIN1Q05586 938 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 CUL4AQ13619 759 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 USP41Q3LFD5 358 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 DCAF4L1Q3SXM0 396 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 GLRA4Q5JXX5 417 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 RTP2Q5QGT7 225 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 ARL6IP4Q66PJ3 421 aaKnown RBP10.73□□□□□ -0.69
UFD1-210ENST00000494054 PRSS55Q6UWB4 352 aaPredicted RBP10.73□□□□□ -0.69
UFD1-210ENST00000494054 BMP8AQ7Z5Y6 402 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 PALB2Q86YC2 1186 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 GLYCTKQ8IVS8 523 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 SYT2Q8N9I0 419 aaPredicted RBP10.73□□□□□ -0.69
UFD1-210ENST00000494054 HASPINQ8TF76 798 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 RIN2Q8WYP3 895 aaPredicted RBP10.73□□□□□ -0.69
UFD1-210ENST00000494054 FAM122AQ96E09 287 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 TARS2Q9BW92 718 aaKnown RBP10.73□□□□□ -0.69
UFD1-210ENST00000494054 CDT1Q9H211 546 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 SMOC2Q9H3U7 446 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 TMEM134Q9H6X4 195 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 SFXN1Q9H9B4 322 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 KMT5AQ9NQR1 393 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 ARHGAP28Q9P2N2 729 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 SSX2IPQ9Y2D8 614 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.73□□□□□ -0.69
UFD1-210ENST00000494054 MUC6Q6W4X9 2439 aa10.73□□□□□ -0.69
UFD1-210ENST00000494054 PLXNA3P51805 1871 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 SPDYE4A6NLX3 237 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 ABLIM1O14639 778 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 MEFVO15553 781 aaPredicted RBP10.72□□□□□ -0.69
UFD1-210ENST00000494054 TGM5O43548 720 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 RFPL2O75678 378 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 GLUD1P00367 558 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 ASGR2P07307 311 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 ADH1AP07327 375 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 PLA2G4BP0C869 781 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 PROZP22891 400 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 GUCY2CP25092 1073 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 SLC12A3P55017 1021 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 OSTNP61366 133 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 CACNB1Q02641 598 aaPredicted RBP10.72□□□□□ -0.69
UFD1-210ENST00000494054 SIGLEC14Q08ET2 396 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 DMP1Q13316 513 aaPredicted RBP10.72□□□□□ -0.69
UFD1-210ENST00000494054 TMEM119Q4V9L6 283 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 ARSHQ5FYA8 562 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 FAM171A1Q5VUB5 890 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 LILRA6Q6PI73 481 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 CD300LGQ6UXG3 332 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 ZBTB33Q86T24 672 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 KREMEN2Q8NCW0 462 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 SPIRE2Q8WWL2 714 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 PBXIP1Q96AQ6 731 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 ASIC4Q96FT7 647 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 ZBTB45Q96K62 511 aaPredicted RBP10.72□□□□□ -0.69
UFD1-210ENST00000494054 DRC1Q96MC2 740 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 PPP1R10Q96QC0 940 aaKnown RBP10.72□□□□□ -0.69
UFD1-210ENST00000494054 NTPCRQ9BSD7 190 aaKnown RBP10.72□□□□□ -0.69
UFD1-210ENST00000494054 FNIP2Q9P278 1114 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 LIMD1Q9UGP4 676 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 RBM19Q9Y4C8 960 aaKnown RBP10.72□□□□□ -0.69
UFD1-210ENST00000494054 PHLPP2Q6ZVD8 1323 aa10.72□□□□□ -0.69
UFD1-210ENST00000494054 SMIM28A0A1B0GU29 152 aa10.71□□□□□ -0.69
UFD1-210ENST00000494054 CCDC195A0A1B0GUA6 201 aa10.71□□□□□ -0.69
UFD1-210ENST00000494054 SF3B1O75533 1304 aaKnown RBP eCLIP10.71□□□□□ -0.692e-6■■■■■ 96.2
UFD1-210ENST00000494054 BRD1O95696 1058 aa10.71□□□□□ -0.69
UFD1-210ENST00000494054 PLS3P13797 630 aa10.71□□□□□ -0.69
UFD1-210ENST00000494054 GRM5P41594 1212 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms