RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 FAM153BP0C7A2 387 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 CIITAP33076 1130 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 FAM153CQ494X1 144 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 MAP1SQ66K74 1059 aaPredicted RBP11.78□□□□□ -0.52
COL2A1-208ENST00000493991 RUFY4Q6ZNE9 571 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 SV2AQ7L0J3 742 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 CCDC60Q8IWA6 550 aaPredicted RBP11.78□□□□□ -0.52
COL2A1-208ENST00000493991 CCDC33Q8N5R6 958 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.78□□□□□ -0.52
COL2A1-208ENST00000493991 ARHGEF26Q96DR7 871 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 CLMNQ96JQ2 1002 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.78□□□□□ -0.526e-7■■■□□ 16.1
COL2A1-208ENST00000493991 FAM153AQ9UHL3 310 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 STRCP1A6NGW2 1772 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.78□□□□□ -0.52
COL2A1-208ENST00000493991 A0A1W2PQJ5 194 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 F8VZ95 297 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 RGL2O15211 777 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 TLR3O15455 904 aaKnown RBP11.78□□□□□ -0.52
COL2A1-208ENST00000493991 DGAT1O75907 488 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 HLA-DRAP01903 254 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 TCF7P36402 384 aaPredicted RBP11.78□□□□□ -0.52
COL2A1-208ENST00000493991 SNCBQ16143 134 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 CCDC6Q16204 474 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 SMTNL2Q2TAL5 461 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 PPP6R3Q5H9R7 873 aaPredicted RBP11.78□□□□□ -0.52
COL2A1-208ENST00000493991 PALB2Q86YC2 1186 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 HSPH1Q92598 858 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 PBKQ96KB5 322 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 ADPGKQ9BRR6 497 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 FAM167BQ9BTA0 163 aa11.78□□□□□ -0.52
COL2A1-208ENST00000493991 STAM2O75886 525 aa11.77□□□□□ -0.52
COL2A1-208ENST00000493991 CDC25CP30307 473 aa11.77□□□□□ -0.52
COL2A1-208ENST00000493991 PPATQ06203 517 aa11.77□□□□□ -0.52
COL2A1-208ENST00000493991 XKR3Q5GH77 459 aa11.77□□□□□ -0.52
COL2A1-208ENST00000493991 OR6B2Q6IFH4 312 aa11.77□□□□□ -0.52
COL2A1-208ENST00000493991 MSANTD4Q8NCY6 345 aa11.77□□□□□ -0.52
COL2A1-208ENST00000493991 CCT8L2Q96SF2 557 aa11.77□□□□□ -0.52
COL2A1-208ENST00000493991 KCTD10Q9H3F6 313 aa11.77□□□□□ -0.52
COL2A1-208ENST00000493991 PHLPP1O60346 1717 aa11.77□□□□□ -0.52
COL2A1-208ENST00000493991 WDR91A4D1P6 747 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 EIF3HO15372 352 aaKnown RBP eCLIP11.77□□□□□ -0.534e-7■■■□□ 18.8
COL2A1-208ENST00000493991 ATF2P15336 505 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 CA8P35219 290 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 RWDD2BP57060 319 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 ATP11AP98196 1134 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 ZNF699Q32M78 642 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 GLRA4Q5JXX5 417 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 FAM83AQ86UY5 434 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 TSEN2Q8NCE0 465 aaKnown RBP11.77□□□□□ -0.53
COL2A1-208ENST00000493991 TPCN2Q8NHX9 752 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 GDAP1Q8TB36 358 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 FBF1Q8TES7 1133 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 CYP26B1Q9NR63 512 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 VAV3Q9UKW4 847 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 ROBO3Q96MS0 1386 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 COL14A1Q05707 1796 aaKnown RBP11.77□□□□□ -0.53
COL2A1-208ENST00000493991 NUP98P52948 1817 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 TULP2O00295 520 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 ATP2A1O14983 1001 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 ECEL1O95672 775 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 PTPRAP18433 802 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 PCK1P35558 622 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 RGS7P49802 495 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 MRPS9P82933 396 aaKnown RBP11.77□□□□□ -0.53
COL2A1-208ENST00000493991 BIRC2Q13490 618 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 MEA1Q16626 185 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 AMHR2Q16671 573 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 CYP4A22Q5TCH4 519 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 PHLDB3Q6NSJ2 640 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 CCDC137Q6PK04 289 aaKnown RBP11.77□□□□□ -0.53
COL2A1-208ENST00000493991 CREG2Q8IUH2 290 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 PRPF31Q8WWY3 499 aaKnown RBP11.77□□□□□ -0.53
COL2A1-208ENST00000493991 MIS12Q9H081 205 aa11.77□□□□□ -0.53
COL2A1-208ENST00000493991 IRF6O14896 467 aa11.76□□□□□ -0.53
COL2A1-208ENST00000493991 LSP1P33241 339 aa11.76□□□□□ -0.53
COL2A1-208ENST00000493991 MYO1EQ12965 1108 aa11.76□□□□□ -0.53
COL2A1-208ENST00000493991 NLRP14Q86W24 1093 aa11.76□□□□□ -0.53
COL2A1-208ENST00000493991 RSAD2Q8WXG1 361 aa11.76□□□□□ -0.53
COL2A1-208ENST00000493991 SLC5A5Q92911 643 aa11.76□□□□□ -0.53
COL2A1-208ENST00000493991 RNF34Q969K3 372 aa11.76□□□□□ -0.53
COL2A1-208ENST00000493991 MMP19Q99542 508 aa11.76□□□□□ -0.53
COL2A1-208ENST00000493991 RPF1Q9H9Y2 349 aaKnown RBP11.76□□□□□ -0.53
COL2A1-208ENST00000493991 NCOA4Q13772 614 aa11.76□□□□□ -0.53
COL2A1-208ENST00000493991 PAPD7Q5XG87 772 aaKnown RBP11.76□□□□□ -0.53
COL2A1-208ENST00000493991 CATSPER4Q7RTX7 472 aa11.76□□□□□ -0.53
COL2A1-208ENST00000493991 ERICH1Q86X53 443 aa11.76□□□□□ -0.53
COL2A1-208ENST00000493991 VSIG1Q86XK7 387 aa11.76□□□□□ -0.53
COL2A1-208ENST00000493991 RBM46Q8TBY0 533 aaKnown RBP11.76□□□□□ -0.53
COL2A1-208ENST00000493991 NEK9Q8TD19 979 aa11.76□□□□□ -0.53
COL2A1-208ENST00000493991 HNRNPLLQ8WVV9 542 aaKnown RBP11.76□□□□□ -0.53
COL2A1-208ENST00000493991 EDEM3Q9BZQ6 932 aa11.76□□□□□ -0.53
COL2A1-208ENST00000493991 CPSF2Q9P2I0 782 aaKnown RBP11.76□□□□□ -0.53
COL2A1-208ENST00000493991 SUCLA2Q9P2R7 463 aaPredicted RBP11.76□□□□□ -0.53
COL2A1-208ENST00000493991 H7C0C1 242 aa11.76□□□□□ -0.53
COL2A1-208ENST00000493991 SYF2O95926 243 aaKnown RBP11.76□□□□□ -0.53
COL2A1-208ENST00000493991 ATP5OP48047 213 aa11.76□□□□□ -0.53
COL2A1-208ENST00000493991 BASP1P80723 227 aaKnown RBP11.76□□□□□ -0.53
COL2A1-208ENST00000493991 EMBQ6PCB8 327 aa11.76□□□□□ -0.53
COL2A1-208ENST00000493991 RHOT2Q8IXI1 618 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms