RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 MSLNLQ96KJ4 702 aa24.84■■□□□ 1.57
SNIP1-203ENST00000493916 CDT1Q9H211 546 aa24.84■■□□□ 1.57
SNIP1-203ENST00000493916 CLEC1BQ9P126 229 aa24.84■■□□□ 1.57
SNIP1-203ENST00000493916 TFIP11Q9UBB9 837 aaKnown RBP24.84■■□□□ 1.57
SNIP1-203ENST00000493916 PRG3Q9Y2Y8 225 aaPredicted RBP24.84■■□□□ 1.57
SNIP1-203ENST00000493916 ABLIM1O14639 778 aa24.83■■□□□ 1.57
SNIP1-203ENST00000493916 PTGESO14684 152 aa24.83■■□□□ 1.57
SNIP1-203ENST00000493916 TBCAO75347 108 aaKnown RBP24.83■■□□□ 1.57
SNIP1-203ENST00000493916 MCF2P10911 925 aa24.83■■□□□ 1.57
SNIP1-203ENST00000493916 GRM5P41594 1212 aa24.83■■□□□ 1.57
SNIP1-203ENST00000493916 KCNC3Q14003 757 aa24.83■■□□□ 1.57
SNIP1-203ENST00000493916 ATL3Q6DD88 541 aa24.83■■□□□ 1.57
SNIP1-203ENST00000493916 MPZL3Q6UWV2 235 aa24.83■■□□□ 1.57
SNIP1-203ENST00000493916 ZPBP2Q6X784 338 aa24.83■■□□□ 1.57
SNIP1-203ENST00000493916 VN1R2Q8NFZ6 395 aa24.83■■□□□ 1.57
SNIP1-203ENST00000493916 CD207Q9UJ71 328 aa24.83■■□□□ 1.57
SNIP1-203ENST00000493916 FAM50BQ9Y247 325 aa24.83■■□□□ 1.57
SNIP1-203ENST00000493916 EFEMP2O95967 443 aa24.82■■□□□ 1.56
SNIP1-203ENST00000493916 COASYQ13057 564 aa24.82■■□□□ 1.56
SNIP1-203ENST00000493916 TUSC3Q13454 348 aa24.82■■□□□ 1.56
SNIP1-203ENST00000493916 TMEM184AQ6ZMB5 413 aa24.82■■□□□ 1.56
SNIP1-203ENST00000493916 HAUS6Q7Z4H7 955 aa24.82■■□□□ 1.56
SNIP1-203ENST00000493916 MYCT1Q8N699 235 aa24.82■■□□□ 1.56
SNIP1-203ENST00000493916 GDAQ9Y2T3 454 aa24.82■■□□□ 1.56
SNIP1-203ENST00000493916 BDP1A6H8Y1 2624 aa24.81■■□□□ 1.56
SNIP1-203ENST00000493916 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.81■■□□□ 1.56
SNIP1-203ENST00000493916 TOM1L1O75674 476 aa24.81■■□□□ 1.56
SNIP1-203ENST00000493916 CXCL14O95715 111 aa24.81■■□□□ 1.56
SNIP1-203ENST00000493916 SRGAP2BP0DMP2 458 aa24.81■■□□□ 1.56
SNIP1-203ENST00000493916 SMAD4Q13485 552 aaKnown RBP24.81■■□□□ 1.56
SNIP1-203ENST00000493916 RNF168Q8IYW5 571 aaPredicted RBP24.81■■□□□ 1.56
SNIP1-203ENST00000493916 NECAB3Q96P71 396 aaPredicted RBP24.81■■□□□ 1.56
SNIP1-203ENST00000493916 HERC2P3Q9BVR0 1158 aa24.81■■□□□ 1.56
SNIP1-203ENST00000493916 COLEC11Q9BWP8 271 aa24.81■■□□□ 1.56
SNIP1-203ENST00000493916 BARX2Q9UMQ3 279 aaPredicted RBP24.81■■□□□ 1.56
SNIP1-203ENST00000493916 A0A087X0B3 334 aa24.8■■□□□ 1.56
SNIP1-203ENST00000493916 TNFRSF10AO00220 468 aa24.8■■□□□ 1.56
SNIP1-203ENST00000493916 SOD2P04179 222 aa24.8■■□□□ 1.56
SNIP1-203ENST00000493916 THP07101 528 aa24.8■■□□□ 1.56
SNIP1-203ENST00000493916 IL9P15248 144 aa24.8■■□□□ 1.56
SNIP1-203ENST00000493916 ABCD1P33897 745 aa24.8■■□□□ 1.56
SNIP1-203ENST00000493916 PTPN14Q15678 1187 aa24.8■■□□□ 1.56
SNIP1-203ENST00000493916 NAB2Q15742 525 aa24.8■■□□□ 1.56
SNIP1-203ENST00000493916 CLUL1Q15846 466 aa24.8■■□□□ 1.56
SNIP1-203ENST00000493916 SV2BQ7L1I2 683 aa24.8■■□□□ 1.56
SNIP1-203ENST00000493916 CEP120Q8N960 986 aa24.8■■□□□ 1.56
SNIP1-203ENST00000493916 SMRP1Q8NCR6 262 aa24.8■■□□□ 1.56
SNIP1-203ENST00000493916 KCNG4Q8TDN1 519 aa24.8■■□□□ 1.56
SNIP1-203ENST00000493916 FIZ1Q96SL8 496 aa24.8■■□□□ 1.56
SNIP1-203ENST00000493916 CCDC94Q9BW85 323 aaPredicted RBP24.8■■□□□ 1.56
SNIP1-203ENST00000493916 CXCL16Q9H2A7 254 aa24.8■■□□□ 1.56
SNIP1-203ENST00000493916 TOPORSQ9NS56 1045 aaPredicted RBP24.8■■□□□ 1.56
SNIP1-203ENST00000493916 TCF20Q9UGU0 1960 aaKnown RBP24.8■■□□□ 1.56
SNIP1-203ENST00000493916 K7ENM7 598 aa24.79■■□□□ 1.56
SNIP1-203ENST00000493916 MBTPS2O43462 519 aa24.79■■□□□ 1.56
SNIP1-203ENST00000493916 TRAK2O60296 914 aa24.79■■□□□ 1.56
SNIP1-203ENST00000493916 CUTAO60888 179 aa24.79■■□□□ 1.56
SNIP1-203ENST00000493916 CLASP2O75122 1294 aaKnown RBP24.79■■□□□ 1.56
SNIP1-203ENST00000493916 STAT6P42226 847 aa24.79■■□□□ 1.56
SNIP1-203ENST00000493916 RBM10P98175 930 aaKnown RBP24.79■■□□□ 1.56
SNIP1-203ENST00000493916 NOLC1Q14978 699 aaKnown RBP eCLIP24.79■■□□□ 1.56
SNIP1-203ENST00000493916 ZBTB33Q86T24 672 aa24.79■■□□□ 1.56
SNIP1-203ENST00000493916 FAM178BQ8IXR5 827 aa24.79■■□□□ 1.56
SNIP1-203ENST00000493916 AUTS2Q8WXX7 1259 aa24.79■■□□□ 1.56
SNIP1-203ENST00000493916 TCHPQ9BT92 498 aa24.79■■□□□ 1.56
SNIP1-203ENST00000493916 TBX20Q9UMR3 447 aa24.79■■□□□ 1.56
SNIP1-203ENST00000493916 MYMKA6NI61 221 aa24.78■■□□□ 1.56
SNIP1-203ENST00000493916 F8W810 466 aa24.78■■□□□ 1.56
SNIP1-203ENST00000493916 CA8P35219 290 aa24.78■■□□□ 1.56
SNIP1-203ENST00000493916 YARSP54577 528 aaKnown RBP24.78■■□□□ 1.56
SNIP1-203ENST00000493916 MCL1Q07820 350 aa24.78■■□□□ 1.56
SNIP1-203ENST00000493916 HSP90AA2PQ14568 343 aaPredicted RBP24.78■■□□□ 1.56
SNIP1-203ENST00000493916 SMAD2Q15796 467 aaKnown RBP24.78■■□□□ 1.56
SNIP1-203ENST00000493916 FOXD4L6Q3SYB3 417 aaPredicted RBP24.78■■□□□ 1.56
SNIP1-203ENST00000493916 XKR4Q5GH76 650 aa24.78■■□□□ 1.56
SNIP1-203ENST00000493916 FOXD4L3Q6VB84 417 aaPredicted RBP24.78■■□□□ 1.56
SNIP1-203ENST00000493916 DDX12PQ92771 950 aa24.78■■□□□ 1.56
SNIP1-203ENST00000493916 PPP1R10Q96QC0 940 aaKnown RBP24.78■■□□□ 1.56
SNIP1-203ENST00000493916 ST6GALNAC4Q9H4F1 302 aa24.78■■□□□ 1.56
SNIP1-203ENST00000493916 ZHX3Q9H4I2 956 aa24.78■■□□□ 1.56
SNIP1-203ENST00000493916 ANKFY1Q9P2R3 1169 aa24.78■■□□□ 1.56
SNIP1-203ENST00000493916 ADAM28Q9UKQ2 775 aa24.78■■□□□ 1.56
SNIP1-203ENST00000493916 CFAP45Q9UL16 551 aa24.78■■□□□ 1.56
SNIP1-203ENST00000493916 LILRB3O75022 631 aa24.77■■□□□ 1.56
SNIP1-203ENST00000493916 PIGRP01833 764 aa24.77■■□□□ 1.56
SNIP1-203ENST00000493916 GTF2BQ00403 316 aa24.77■■□□□ 1.56
SNIP1-203ENST00000493916 ALKAL1Q6UXT8 129 aa24.77■■□□□ 1.56
SNIP1-203ENST00000493916 CASP10Q92851 521 aa24.77■■□□□ 1.56
SNIP1-203ENST00000493916 BICD1Q96G01 975 aa24.77■■□□□ 1.56
SNIP1-203ENST00000493916 ZBTB45Q96K62 511 aaPredicted RBP24.77■■□□□ 1.56
SNIP1-203ENST00000493916 SNX27Q96L92 541 aa24.77■■□□□ 1.56
SNIP1-203ENST00000493916 MRPL17Q9NRX2 175 aaKnown RBP24.77■■□□□ 1.56
SNIP1-203ENST00000493916 PRKAG3Q9UGI9 489 aa24.77■■□□□ 1.56
SNIP1-203ENST00000493916 SSX2IPQ9Y2D8 614 aa24.77■■□□□ 1.56
SNIP1-203ENST00000493916 HCFC2Q9Y5Z7 792 aa24.77■■□□□ 1.56
SNIP1-203ENST00000493916 CASTOR2A6NHX0 329 aa24.76■■□□□ 1.55
SNIP1-203ENST00000493916 CLDN3O15551 220 aa24.76■■□□□ 1.55
SNIP1-203ENST00000493916 URODP06132 367 aa24.76■■□□□ 1.55
SNIP1-203ENST00000493916 AXDND1Q5T1B0 1012 aaPredicted RBP24.76■■□□□ 1.55
SNIP1-203ENST00000493916 ANKRD54Q6NXT1 300 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms