RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 LINC01565O15544 149 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 MBTPS2O43462 519 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 DCXO43602 365 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 CCNT1O60563 726 aaKnown RBP8.44□□□□□ -1.06
RBM39-238ENST00000493853 CSDE1O75534 798 aaKnown RBP8.44□□□□□ -1.06
RBM39-238ENST00000493853 EOMESO95936 686 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 ARAFP10398 606 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 GCFC2P16383 781 aaKnown RBP8.44□□□□□ -1.06
RBM39-238ENST00000493853 FGFR4P22455 802 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 AMPD1P23109 780 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 SFPQP23246 707 aaKnown RBP eCLIP8.44□□□□□ -1.06
RBM39-238ENST00000493853 DNAJB1P25685 340 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 PPM1AP35813 382 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 ALDH7A1P49419 539 aaKnown RBP8.44□□□□□ -1.06
RBM39-238ENST00000493853 GPC3P51654 580 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 PSMC5P62195 406 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 ZP2Q05996 745 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 DLX2Q07687 328 aaPredicted RBP8.44□□□□□ -1.06
RBM39-238ENST00000493853 DPYDQ12882 1025 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 SMAD4Q13485 552 aaKnown RBP8.44□□□□□ -1.06
RBM39-238ENST00000493853 CAMK1Q14012 370 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 DSC3Q14574 896 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 SMAD2Q15796 467 aaKnown RBP8.44□□□□□ -1.06
RBM39-238ENST00000493853 UGCGQ16739 394 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 TWF2Q6IBS0 349 aaKnown RBP8.44□□□□□ -1.06
RBM39-238ENST00000493853 OTUD6AQ7L8S5 288 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 TMC7Q7Z402 723 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 ADGRD2Q7Z7M1 963 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 NEK8Q86SG6 692 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 ECHDC2Q86YB7 292 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 RHPN2Q8IUC4 686 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 LRRC43Q8N309 656 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 EFHBQ8N7U6 833 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 SLC7A3Q8WY07 619 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 ZNF558Q96NG5 402 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 AIFM3Q96NN9 605 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 SH2D3AQ9BRG2 576 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 PHACTR1Q9C0D0 580 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 CHST12Q9NRB3 414 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 SPG21Q9NZD8 308 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 MARK1Q9P0L2 795 aa8.44□□□□□ -1.06
RBM39-238ENST00000493853 SUCLA2Q9P2R7 463 aaPredicted RBP8.44□□□□□ -1.06
RBM39-238ENST00000493853 GPC6Q9Y625 555 aaPredicted RBP8.44□□□□□ -1.06
RBM39-238ENST00000493853 COL4A6Q14031 1691 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 A0A087WZ62 844 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 A0A0U1RQF3 1178 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 PRR33A8MZF0 331 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 EDIL3O43854 480 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 PFKFB2O60825 505 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 TBX10O75333 385 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 MAFO75444 373 aaPredicted RBP8.43□□□□□ -1.06
RBM39-238ENST00000493853 P4HBP07237 508 aaKnown RBP8.43□□□□□ -1.06
RBM39-238ENST00000493853 QARSP47897 775 aaKnown RBP8.43□□□□□ -1.06
RBM39-238ENST00000493853 POLGP54098 1239 aaPredicted RBP8.43□□□□□ -1.06
RBM39-238ENST00000493853 ANAPC15P60006 121 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 ERVFC1P60507 584 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 SCRN1Q12765 414 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 TARBP2Q15633 366 aaKnown RBP8.43□□□□□ -1.06
RBM39-238ENST00000493853 PLPP4Q5VZY2 271 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 PPP4R3AQ6IN85 833 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 KCNT2Q6UVM3 1135 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 SLCO4C1Q6ZQN7 724 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 PIK3AP1Q6ZUJ8 805 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 CATSPER4Q7RTX7 472 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 ZNF410Q86VK4 478 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 LINC01465Q8N7H1 131 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 ETNPPLQ8TBG4 499 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 HELQQ8TDG4 1101 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 MRPS27Q92552 414 aaKnown RBP8.43□□□□□ -1.06
RBM39-238ENST00000493853 CEP170P1Q96L14 293 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 NLRP4Q96MN2 994 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 CASD1Q96PB1 797 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 CDCA3Q99618 268 aaPredicted RBP8.43□□□□□ -1.06
RBM39-238ENST00000493853 TCF25Q9BQ70 676 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 FDXACB1Q9BRP7 624 aaPredicted RBP8.43□□□□□ -1.06
RBM39-238ENST00000493853 PHF20Q9BVI0 1012 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 MRPL9Q9BYD2 267 aaKnown RBP8.43□□□□□ -1.06
RBM39-238ENST00000493853 CWH43Q9H720 699 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 NGRNQ9NPE2 291 aaKnown RBP8.43□□□□□ -1.06
RBM39-238ENST00000493853 PPP4R2Q9NY27 417 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 ORC3Q9UBD5 711 aaPredicted RBP8.43□□□□□ -1.06
RBM39-238ENST00000493853 PIN4Q9Y237 131 aaKnown RBP8.43□□□□□ -1.06
RBM39-238ENST00000493853 LZTS1Q9Y250 596 aa8.43□□□□□ -1.06
RBM39-238ENST00000493853 CARNS1A5YM72 827 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 TMEM150BA6NC51 233 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 TBX3O15119 743 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 SLC37A4O43826 429 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 EYA4O95677 639 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 SRGAP2CP0DJJ0 459 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 KRT2P35908 639 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 PLA2G5P39877 138 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 PLCB3Q01970 1234 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 RNASELQ05823 741 aaKnown RBP8.42□□□□□ -1.06
RBM39-238ENST00000493853 NCBP1Q09161 790 aaKnown RBP8.42□□□□□ -1.06
RBM39-238ENST00000493853 PPP2R5CQ13362 524 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 TRIM29Q14134 588 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 LONRF3Q496Y0 759 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 XKR9Q5GH70 373 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 NCAPH2Q6IBW4 605 aa8.42□□□□□ -1.06
RBM39-238ENST00000493853 GLB1LQ6UWU2 654 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms