RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 SUPT20HL1Q3ZLR7 823 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 SLC27A3Q5K4L6 730 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 RC3H1Q5TC82 1133 aaKnown RBP8.28□□□□□ -1.08
BRCA1-221ENST00000493795 ZNF544Q6NX49 715 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 CASP10Q92851 521 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 PIGSQ96S52 555 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 KLHL25Q9H0H3 589 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 RHBDL2Q9NX52 303 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 AP4S1Q9Y587 144 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 FOXP2O15409 715 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 CLASP2O75122 1294 aaKnown RBP8.28□□□□□ -1.08
BRCA1-221ENST00000493795 MMP1P03956 469 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 GUCA1AP43080 201 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-221ENST00000493795 PHKA2P46019 1235 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 PLA2G4AP47712 749 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 BCAMP50895 628 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 ATXN3P54252 364 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-221ENST00000493795 KCNK10P57789 538 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 MRPS25P82663 173 aaKnown RBP8.28□□□□□ -1.08
BRCA1-221ENST00000493795 TAP1Q03518 808 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 NCAPHQ15003 741 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 TSC22D1Q15714 1073 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 CC2D1AQ6P1N0 951 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-221ENST00000493795 TMC5Q6UXY8 1006 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 THNSL1Q8IYQ7 743 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 C10orf53Q8N6V4 93 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 VPS37AQ8NEZ2 397 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 FAM45AQ8TCE6 357 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 DNAJC9Q8WXX5 260 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 PIGUQ9H490 435 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 KANSL2Q9H9L4 492 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 IMPAD1Q9NX62 359 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 MAGI1Q96QZ7 1491 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-221ENST00000493795 S100A9P06702 114 aaKnown RBP8.28□□□□□ -1.08
BRCA1-221ENST00000493795 COG2Q14746 738 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 ZNF394Q53GI3 561 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 TTC33Q6PID6 262 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-221ENST00000493795 TMEM270Q6UE05 265 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 ARHGAP27Q6ZUM4 889 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 EFL1Q7Z2Z2 1120 aaKnown RBP8.28□□□□□ -1.08
BRCA1-221ENST00000493795 C19orf18Q8NEA5 215 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 RIN3Q8TB24 985 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 ELMO2Q96JJ3 720 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 SLC9A2Q9UBY0 812 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 SERPINB13Q9UIV8 391 aa8.28□□□□□ -1.08
BRCA1-221ENST00000493795 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.28□□□□□ -1.08
BRCA1-221ENST00000493795 DENND3A2RUS2 1198 aa8.27□□□□□ -1.08
BRCA1-221ENST00000493795 SAC3D1A6NKF1 404 aa8.27□□□□□ -1.08
BRCA1-221ENST00000493795 H7C0S8 307 aa8.27□□□□□ -1.08
BRCA1-221ENST00000493795 MARK3P27448 753 aa8.27□□□□□ -1.08
BRCA1-221ENST00000493795 PEX3P56589 373 aa8.27□□□□□ -1.08
BRCA1-221ENST00000493795 CTTNQ14247 550 aaKnown RBP8.27□□□□□ -1.08
BRCA1-221ENST00000493795 COBLL1Q53SF7 1204 aa8.27□□□□□ -1.08
BRCA1-221ENST00000493795 C11orf74Q86VG3 221 aa8.27□□□□□ -1.08
BRCA1-221ENST00000493795 APLFQ8IW19 511 aaPredicted RBP8.27□□□□□ -1.08
BRCA1-221ENST00000493795 RHOT1Q8IXI2 618 aa8.27□□□□□ -1.08
BRCA1-221ENST00000493795 ZNF513Q8N8E2 541 aaPredicted RBP8.27□□□□□ -1.08
BRCA1-221ENST00000493795 FLAD1Q8NFF5 587 aa8.27□□□□□ -1.08
BRCA1-221ENST00000493795 CALML6Q8TD86 181 aa8.27□□□□□ -1.08
BRCA1-221ENST00000493795 PRMT1Q99873 361 aaKnown RBP8.27□□□□□ -1.08
BRCA1-221ENST00000493795 C11orf70Q9BRQ4 267 aa8.27□□□□□ -1.08
BRCA1-221ENST00000493795 MXD3Q9BW11 206 aa8.27□□□□□ -1.08
BRCA1-221ENST00000493795 FAM49AQ9H0Q0 323 aaPredicted RBP8.27□□□□□ -1.08
BRCA1-221ENST00000493795 CARD9Q9H257 536 aa8.27□□□□□ -1.08
BRCA1-221ENST00000493795 SPATA2Q9UM82 520 aa8.27□□□□□ -1.08
BRCA1-221ENST00000493795 NEURL1BA8MQ27 555 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 EVPLLA8MZ36 301 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-221ENST00000493795 RSPH10B2B2RC85 870 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 ATP9BO43861 1147 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 MOCS2O96007 188 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-221ENST00000493795 RSPH10BP0C881 870 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 CCND1P24385 295 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 ACTR2P61160 394 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 DHX34Q14147 1143 aaKnown RBP8.27□□□□□ -1.09
BRCA1-221ENST00000493795 TRIP10Q15642 601 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 GPR141Q7Z602 305 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 FAM160B2Q86V87 743 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 HEATR4Q86WZ0 1026 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 ATXN7L3BQ96GX2 97 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 TRABDQ9H4I3 376 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 RIC8BQ9NVN3 520 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 PCSK1NQ9UHG2 260 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 DOLKQ9UPQ8 538 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 PKP3Q9Y446 797 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 SRPRBQ9Y5M8 271 aaKnown RBP8.27□□□□□ -1.09
BRCA1-221ENST00000493795 PTPN23Q9H3S7 1636 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 UBN2Q6ZU65 1347 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 PITPNM2Q9BZ72 1349 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 ATP10DQ9P241 1426 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 CLDN3O15551 220 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 PEX1O43933 1283 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 CYBBP04839 570 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 TALDO1P37837 337 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 ALFQ53S48 1182 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 SETD3Q86TU7 594 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-221ENST00000493795 STAG2Q8N3U4 1231 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 GIMAP8Q8ND71 665 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-221ENST00000493795 EXD1Q8NHP7 514 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 RUBCNQ92622 972 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms