RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 ZFATQ9P243 1243 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.25■□□□□ 0.99
RNF40-203ENST00000493683 REREQ9P2R6 1566 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 VSNL1P62760 191 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 CUL3Q13618 768 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 KCNV1Q6PIU1 500 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 URGCPQ8TCY9 931 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 RAPGEF5Q92565 580 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 SUGT1Q9Y2Z0 365 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 H0Y626 953 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 TRIM16O95361 564 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 SNAP25P60880 206 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 LBRQ14739 615 aaKnown RBP21.25■□□□□ 0.99
RNF40-203ENST00000493683 POTEAQ6S8J7 498 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 PRUNE1Q86TP1 453 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 STX19Q8N4C7 294 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 KRT35Q92764 455 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 EHD2Q9NZN4 543 aa21.25■□□□□ 0.99
RNF40-203ENST00000493683 CYP2C19P33261 490 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 CDH6P55285 790 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 ACTN3Q08043 901 aaPredicted RBP21.24■□□□□ 0.99
RNF40-203ENST00000493683 FASTKD1Q53R41 847 aaKnown RBP21.24■□□□□ 0.99
RNF40-203ENST00000493683 SCFD1Q8WVM8 642 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 PPP1R16BQ96T49 567 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 KCNK16Q96T55 309 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 SLC13A1Q9BZW2 595 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 RNF146Q9NTX7 359 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 AGO2Q9UKV8 859 aaKnown RBP21.24■□□□□ 0.99
RNF40-203ENST00000493683 EIF3HO15372 352 aaKnown RBP eCLIP21.24■□□□□ 0.994e-7■□□□□ 8.7
RNF40-203ENST00000493683 QRICH1Q2TAL8 776 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 LRRC8EQ6NSJ5 796 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 RIBC1Q8N443 379 aaPredicted RBP21.24■□□□□ 0.99
RNF40-203ENST00000493683 TNIP3Q96KP6 325 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 EGFL8Q99944 293 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 CD209Q9NNX6 404 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 MLXIPLQ9NP71 852 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 GABBR1Q9UBS5 961 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 LAMC1P11047 1609 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 LRRC14Q15048 493 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 SNRNP48Q6IEG0 339 aaKnown RBP21.24■□□□□ 0.99
RNF40-203ENST00000493683 C7orf25Q9BPX7 421 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 DHX35Q9H5Z1 703 aaKnown RBP21.24■□□□□ 0.99
RNF40-203ENST00000493683 AMACRQ9UHK6 382 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 PCDHGB4Q9UN71 923 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 USP15Q9Y4E8 981 aaPredicted RBP21.24■□□□□ 0.99
RNF40-203ENST00000493683 DEAF1O75398 565 aaPredicted RBP21.24■□□□□ 0.99
RNF40-203ENST00000493683 HAUS6Q7Z4H7 955 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 C1orf54Q8WWF1 131 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 TSPAN17Q96FV3 270 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 EPHA10Q5JZY3 1008 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 TWF2Q6IBS0 349 aaKnown RBP21.24■□□□□ 0.99
RNF40-203ENST00000493683 ADGRF4Q8IZF3 695 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 ZNF473Q8WTR7 871 aaKnown RBP21.24■□□□□ 0.99
RNF40-203ENST00000493683 NARFQ9UHQ1 456 aa21.24■□□□□ 0.99
RNF40-203ENST00000493683 ADRA2BP18089 450 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 SCP2P22307 547 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 PRDX5P30044 214 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 KCNQ4P56696 695 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 EIF3EP60228 445 aaKnown RBP21.23■□□□□ 0.99
RNF40-203ENST00000493683 RAD51Q06609 339 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 TMEM260Q9NX78 707 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 NSMCE4AQ9NXX6 385 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 SUFUQ9UMX1 484 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 GSG1L2A8MUP6 293 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 ANKRD65E5RJM6 399 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 MYL3P08590 195 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 HSD17B4P51659 736 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 KCNA1Q09470 495 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 NFX1Q12986 1120 aaKnown RBP21.23■□□□□ 0.99
RNF40-203ENST00000493683 ANKRD40Q6AI12 368 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 SRLQ86TD4 932 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 PPHLN1Q8NEY8 458 aaKnown RBP21.23■□□□□ 0.99
RNF40-203ENST00000493683 SH3GL3Q99963 347 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 LRRC1Q9BTT6 524 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 PSMC3IPQ9P2W1 217 aaPredicted RBP21.23■□□□□ 0.99
RNF40-203ENST00000493683 TBX3O15119 743 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 KRT8P05787 483 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 RABGAP1LQ5R372 815 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 SEPT8Q92599 483 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 EPAS1Q99814 870 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 A0A1W2PQJ5 194 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 ZNF746Q6NUN9 644 aaPredicted RBP21.23■□□□□ 0.99
RNF40-203ENST00000493683 METTL16Q86W50 562 aaKnown RBP21.23■□□□□ 0.99
RNF40-203ENST00000493683 ADSSL1Q8N142 457 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 WDR24Q96S15 920 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 TRIM9Q9C026 710 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 CYP4F11Q9HBI6 524 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 RAVER2Q9HCJ3 691 aaKnown RBP21.23■□□□□ 0.99
RNF40-203ENST00000493683 PSD3Q9NYI0 1048 aa21.23■□□□□ 0.99
RNF40-203ENST00000493683 TCP11X1B4DZS4 312 aa21.22■□□□□ 0.99
RNF40-203ENST00000493683 SNRPFP62306 86 aaKnown RBP21.22■□□□□ 0.99
RNF40-203ENST00000493683 CDK17Q00537 523 aa21.22■□□□□ 0.99
RNF40-203ENST00000493683 CDC42EP1Q00587 391 aa21.22■□□□□ 0.99
RNF40-203ENST00000493683 RHPN2Q8IUC4 686 aa21.22■□□□□ 0.99
RNF40-203ENST00000493683 APEX2Q9UBZ4 518 aa21.22■□□□□ 0.99
RNF40-203ENST00000493683 BLOC1S6Q9UL45 172 aa21.22■□□□□ 0.99
RNF40-203ENST00000493683 PCDHA10Q9Y5I2 948 aa21.22■□□□□ 0.99
RNF40-203ENST00000493683 SLC4A7Q9Y6M7 1214 aa21.22■□□□□ 0.99
RNF40-203ENST00000493683 ARAP3Q8WWN8 1544 aa21.22■□□□□ 0.99
RNF40-203ENST00000493683 STXBP3O00186 592 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms