RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 TEPSINQ96N21 525 aa7.56□□□□□ -1.2
SMG7-208ENST00000493609 MAP3K14Q99558 947 aa7.56□□□□□ -1.2
SMG7-208ENST00000493609 NELFAQ9H3P2 528 aa7.56□□□□□ -1.2
SMG7-208ENST00000493609 MANSC1Q9H8J5 431 aa7.56□□□□□ -1.2
SMG7-208ENST00000493609 LANCL2Q9NS86 450 aa7.56□□□□□ -1.2
SMG7-208ENST00000493609 AJAP1Q9UKB5 411 aaPredicted RBP7.56□□□□□ -1.2
SMG7-208ENST00000493609 MYBBP1AQ9BQG0 1328 aaKnown RBP7.55□□□□□ -1.2
SMG7-208ENST00000493609 FOXS1O43638 330 aa7.55□□□□□ -1.2
SMG7-208ENST00000493609 DTNBO60941 627 aa7.55□□□□□ -1.2
SMG7-208ENST00000493609 U2AF1L5P0DN76 240 aaPredicted RBP7.55□□□□□ -1.2
SMG7-208ENST00000493609 FPR1P21462 350 aa7.55□□□□□ -1.2
SMG7-208ENST00000493609 RPS19P39019 145 aaKnown RBP7.55□□□□□ -1.2
SMG7-208ENST00000493609 U2AF1Q01081 240 aaKnown RBP eCLIP7.55□□□□□ -1.22e-8■■□□□ 12.3
SMG7-208ENST00000493609 TARDBPQ13148 414 aaKnown RBP eCLIP7.55□□□□□ -1.2
SMG7-208ENST00000493609 MRPL49Q13405 166 aaKnown RBP7.55□□□□□ -1.2
SMG7-208ENST00000493609 FUKQ8N0W3 1084 aa7.55□□□□□ -1.2
SMG7-208ENST00000493609 TAAR9Q96RI9 348 aa7.55□□□□□ -1.2
SMG7-208ENST00000493609 EPC1Q9H2F5 836 aa7.55□□□□□ -1.2
SMG7-208ENST00000493609 PLA2G3Q9NZ20 509 aa7.55□□□□□ -1.2
SMG7-208ENST00000493609 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.55□□□□□ -1.2
SMG7-208ENST00000493609 ZFR2Q9UPR6 939 aaKnown RBP7.55□□□□□ -1.2
SMG7-208ENST00000493609 GOLGA6CA6NDK9 693 aa7.54□□□□□ -1.2
SMG7-208ENST00000493609 GOLGA6BA6NDN3 693 aa7.54□□□□□ -1.2
SMG7-208ENST00000493609 VSTM5A8MXK1 200 aa7.54□□□□□ -1.2
SMG7-208ENST00000493609 HOXA3O43365 443 aaPredicted RBP7.54□□□□□ -1.2
SMG7-208ENST00000493609 GOLGA6DP0CG33 693 aa7.54□□□□□ -1.2
SMG7-208ENST00000493609 PCSK1P29120 753 aa7.54□□□□□ -1.2
SMG7-208ENST00000493609 GUCY1A2P33402 732 aa7.54□□□□□ -1.2
SMG7-208ENST00000493609 CDC42EP1Q00587 391 aa7.54□□□□□ -1.2
SMG7-208ENST00000493609 GFOD2Q3B7J2 385 aa7.54□□□□□ -1.2
SMG7-208ENST00000493609 HSP90AB2PQ58FF8 381 aa7.54□□□□□ -1.2
SMG7-208ENST00000493609 GLB1LQ6UWU2 654 aa7.54□□□□□ -1.2
SMG7-208ENST00000493609 RSPH3Q86UC2 560 aa7.54□□□□□ -1.2
SMG7-208ENST00000493609 CIR1Q86X95 450 aaPredicted RBP7.54□□□□□ -1.2
SMG7-208ENST00000493609 DRC7Q8IY82 874 aa7.54□□□□□ -1.2
SMG7-208ENST00000493609 DIS3LQ8TF46 1054 aaKnown RBP7.54□□□□□ -1.2
SMG7-208ENST00000493609 TMX3Q96JJ7 454 aa7.54□□□□□ -1.2
SMG7-208ENST00000493609 CLPTM1LQ96KA5 538 aa7.54□□□□□ -1.2
SMG7-208ENST00000493609 C8orf48Q96LL4 319 aa7.54□□□□□ -1.2
SMG7-208ENST00000493609 ZNF512Q96ME7 567 aaPredicted RBP7.54□□□□□ -1.2
SMG7-208ENST00000493609 DMRTA2Q96SC8 542 aa7.54□□□□□ -1.2
SMG7-208ENST00000493609 ACO2Q99798 780 aaKnown RBP7.54□□□□□ -1.2
SMG7-208ENST00000493609 SSBP3Q9BWW4 388 aaPredicted RBP7.54□□□□□ -1.2
SMG7-208ENST00000493609 TMEM140Q9NV12 185 aa7.54□□□□□ -1.2
SMG7-208ENST00000493609 GOLGA6AQ9NYA3 693 aa7.54□□□□□ -1.2
SMG7-208ENST00000493609 ACTL7AQ9Y615 435 aa7.54□□□□□ -1.2
SMG7-208ENST00000493609 CFAP20Q9Y6A4 193 aaKnown RBP7.54□□□□□ -1.2
SMG7-208ENST00000493609 LRRC14BA6NHZ5 514 aa7.53□□□□□ -1.2
SMG7-208ENST00000493609 SGTAO43765 313 aa7.53□□□□□ -1.2
SMG7-208ENST00000493609 DDCP20711 480 aa7.53□□□□□ -1.2
SMG7-208ENST00000493609 MSX2P35548 267 aaPredicted RBP7.53□□□□□ -1.2
SMG7-208ENST00000493609 FOXL1Q12952 345 aa7.53□□□□□ -1.2
SMG7-208ENST00000493609 ARHGAP29Q52LW3 1261 aa7.53□□□□□ -1.2
SMG7-208ENST00000493609 FKBP15Q5T1M5 1219 aa7.53□□□□□ -1.2
SMG7-208ENST00000493609 PPP4R3AQ6IN85 833 aa7.53□□□□□ -1.2
SMG7-208ENST00000493609 PDZD4Q76G19 769 aaPredicted RBP7.53□□□□□ -1.2
SMG7-208ENST00000493609 ZNF572Q7Z3I7 529 aaPredicted RBP7.53□□□□□ -1.2
SMG7-208ENST00000493609 TTC7BQ86TV6 843 aa7.53□□□□□ -1.2
SMG7-208ENST00000493609 XYLT1Q86Y38 959 aa7.53□□□□□ -1.2
SMG7-208ENST00000493609 NSUN6Q8TEA1 469 aaKnown RBP7.53□□□□□ -1.2
SMG7-208ENST00000493609 CYFIP2Q96F07 1278 aa7.53□□□□□ -1.2
SMG7-208ENST00000493609 MSL2Q9HCI7 577 aa7.53□□□□□ -1.2
SMG7-208ENST00000493609 SH3BP1Q9Y3L3 701 aa7.53□□□□□ -1.2
SMG7-208ENST00000493609 ATRNL1Q5VV63 1379 aa7.53□□□□□ -1.2
SMG7-208ENST00000493609 CTNND1O60716 968 aaKnown RBP7.52□□□□□ -1.21
SMG7-208ENST00000493609 GPR32O75388 356 aa7.52□□□□□ -1.21
SMG7-208ENST00000493609 RAD17O75943 681 aa7.52□□□□□ -1.21
SMG7-208ENST00000493609 ALDH2P05091 517 aa7.52□□□□□ -1.21
SMG7-208ENST00000493609 ALOX15P16050 662 aaPredicted RBP7.52□□□□□ -1.21
SMG7-208ENST00000493609 ATP8B2P98198 1209 aa7.52□□□□□ -1.21
SMG7-208ENST00000493609 MTM1Q13496 603 aa7.52□□□□□ -1.21
SMG7-208ENST00000493609 AFMIDQ63HM1 303 aa7.52□□□□□ -1.21
SMG7-208ENST00000493609 ANKS6Q68DC2 871 aa7.52□□□□□ -1.21
SMG7-208ENST00000493609 CAMKK1Q8N5S9 505 aa7.52□□□□□ -1.21
SMG7-208ENST00000493609 PPP1R35Q8TAP8 253 aa7.52□□□□□ -1.21
SMG7-208ENST00000493609 RUNDC1Q96C34 613 aa7.52□□□□□ -1.21
SMG7-208ENST00000493609 C1GALT1C1Q96EU7 318 aa7.52□□□□□ -1.21
SMG7-208ENST00000493609 MRGPRX4Q96LA9 322 aa7.52□□□□□ -1.21
SMG7-208ENST00000493609 VRK1Q99986 396 aaPredicted RBP7.52□□□□□ -1.21
SMG7-208ENST00000493609 KCNH6Q9H252 994 aa7.52□□□□□ -1.21
SMG7-208ENST00000493609 DDX20Q9UHI6 824 aaKnown RBP7.52□□□□□ -1.21
SMG7-208ENST00000493609 RUVBL1Q9Y265 456 aaKnown RBP7.52□□□□□ -1.21
SMG7-208ENST00000493609 RPLP2P05387 115 aaKnown RBP7.51□□□□□ -1.21
SMG7-208ENST00000493609 RAP2AP10114 183 aa7.51□□□□□ -1.21
SMG7-208ENST00000493609 IL2RBP14784 551 aa7.51□□□□□ -1.21
SMG7-208ENST00000493609 ALDH1A3P47895 512 aa7.51□□□□□ -1.21
SMG7-208ENST00000493609 FLT3LGP49771 235 aa7.51□□□□□ -1.21
SMG7-208ENST00000493609 ZNF280AP59817 542 aaPredicted RBP7.51□□□□□ -1.21
SMG7-208ENST00000493609 SP140Q13342 867 aa7.51□□□□□ -1.21
SMG7-208ENST00000493609 NFIXQ14938 502 aa7.51□□□□□ -1.21
SMG7-208ENST00000493609 KHDC1Q4VXA5 237 aaKnown RBP7.51□□□□□ -1.21
SMG7-208ENST00000493609 FAM47AQ5JRC9 791 aa7.51□□□□□ -1.21
SMG7-208ENST00000493609 ELOA2Q8IYF1 753 aaPredicted RBP7.51□□□□□ -1.21
SMG7-208ENST00000493609 ZBTB34Q8NCN2 500 aa7.51□□□□□ -1.21
SMG7-208ENST00000493609 SLC35B2Q8TB61 432 aa7.51□□□□□ -1.21
SMG7-208ENST00000493609 IFI44Q8TCB0 444 aa7.51□□□□□ -1.21
SMG7-208ENST00000493609 RBM15Q96T37 977 aaKnown RBP eCLIP7.51□□□□□ -1.21
SMG7-208ENST00000493609 BDH2Q9BUT1 245 aa7.51□□□□□ -1.21
SMG7-208ENST00000493609 OBP2AQ9NY56 170 aa7.51□□□□□ -1.21
SMG7-208ENST00000493609 RTEL1Q9NZ71 1219 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms