RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 C4orf32Q8N8J7 132 aa11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 TMEM105Q8N8V8 129 aa11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 RSAD2Q8WXG1 361 aa11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 GPR62Q9BZJ7 368 aa11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 CLSTN2Q9H4D0 955 aa11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 ZSWIM4Q9H7M6 989 aa11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 TTC12Q9H892 705 aaPredicted RBP11.29□□□□□ -0.6
SOX2-OT-215ENST00000493521 FAM237AA0A1B0GTK4 181 aa11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 INO80B-WBP1J3KQ70 363 aa11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 MARCH6O60337 910 aa11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 LETM1O95202 739 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 NPTXRO95502 500 aa11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 HOXB8P17481 243 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 RPL17P18621 184 aaKnown RBP11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 AVPR2P30518 371 aa11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 RFC5P40937 340 aa11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 OR1G1P47890 313 aa11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 RAB27AP51159 221 aa11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 DSC1Q08554 894 aa11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 CALCRLQ16602 461 aa11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 KIAA1841Q6NSI8 718 aa11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 FMR1NBQ8N0W7 255 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 HASPINQ8TF76 798 aa11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 MFSD14AQ96MC6 490 aa11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 KIFC3Q9BVG8 833 aa11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 INO80BQ9C086 356 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 CSRNP2Q9H175 543 aa11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 POLR3FQ9H1D9 316 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 PCDHA12Q9UN75 941 aa11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 HPSEQ9Y251 543 aa11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 IRAK3Q9Y616 596 aa11.28□□□□□ -0.6
SOX2-OT-215ENST00000493521 ZDBF2Q9HCK1 2354 aa11.27□□□□□ -0.6
SOX2-OT-215ENST00000493521 VWA3AA6NCI4 1184 aa11.27□□□□□ -0.61
SOX2-OT-215ENST00000493521 H0Y858 1186 aa11.27□□□□□ -0.61
SOX2-OT-215ENST00000493521 TEX28O15482 410 aa11.27□□□□□ -0.61
SOX2-OT-215ENST00000493521 PI15O43692 258 aa11.27□□□□□ -0.61
SOX2-OT-215ENST00000493521 NARSO43776 548 aaKnown RBP11.27□□□□□ -0.61
SOX2-OT-215ENST00000493521 NEMFO60524 1076 aa11.27□□□□□ -0.61
SOX2-OT-215ENST00000493521 KINO60870 393 aaKnown RBP11.27□□□□□ -0.61
SOX2-OT-215ENST00000493521 LYPLA2O95372 231 aa11.27□□□□□ -0.61
SOX2-OT-215ENST00000493521 ITGA4P13612 1032 aa11.27□□□□□ -0.61
SOX2-OT-215ENST00000493521 ORC2Q13416 577 aaPredicted RBP11.27□□□□□ -0.61
SOX2-OT-215ENST00000493521 IL17AQ16552 155 aa11.27□□□□□ -0.61
SOX2-OT-215ENST00000493521 EEF1DP3Q658K8 133 aa11.27□□□□□ -0.61
SOX2-OT-215ENST00000493521 ARL6IP4Q66PJ3 421 aaKnown RBP11.27□□□□□ -0.61
SOX2-OT-215ENST00000493521 LRSAM1Q6UWE0 723 aa11.27□□□□□ -0.61
SOX2-OT-215ENST00000493521 GAS2L3Q86XJ1 694 aa11.27□□□□□ -0.61
SOX2-OT-215ENST00000493521 CATSPER3Q86XQ3 398 aa11.27□□□□□ -0.61
SOX2-OT-215ENST00000493521 ZNF710Q8N1W2 664 aa11.27□□□□□ -0.61
SOX2-OT-215ENST00000493521 RIPOR3Q96MK2 946 aa11.27□□□□□ -0.61
SOX2-OT-215ENST00000493521 TNMDQ9H2S6 317 aa11.27□□□□□ -0.61
SOX2-OT-215ENST00000493521 FAM13BQ9NYF5 915 aa11.27□□□□□ -0.61
SOX2-OT-215ENST00000493521 FAN1Q9Y2M0 1017 aa11.27□□□□□ -0.61
SOX2-OT-215ENST00000493521 LAD1O00515 517 aa11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 ADAM12O43184 909 aa11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 ZNF202O95125 648 aa11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 OR52Z1P0C646 297 aa11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 KLRC2P26717 231 aa11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 SYKP43405 635 aa11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 CDC42EP1Q00587 391 aa11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 ITIH3Q06033 890 aa11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 KIAA0319Q5VV43 1072 aa11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 CWF19L1Q69YN2 538 aaKnown RBP11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 PRSS55Q6UWB4 352 aaPredicted RBP11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 USP49Q70CQ1 688 aa11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 GPR149Q86SP6 731 aa11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 ZBTB33Q86T24 672 aa11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 CABP7Q86V35 215 aa11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 IFNLR1Q8IU57 520 aaPredicted RBP11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 URGCPQ8TCY9 931 aa11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 ZNF707Q96C28 371 aaPredicted RBP11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 PGBD4Q96DM1 585 aa11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 JPH2Q9BR39 696 aaPredicted RBP11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 HERC2P3Q9BVR0 1158 aa11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 MAN1C1Q9NR34 630 aa11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 DBR1Q9UK59 544 aaKnown RBP11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 KCNH3Q9ULD8 1083 aa11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 VWA8A3KMH1 1905 aa11.26□□□□□ -0.61
SOX2-OT-215ENST00000493521 FSD2A1L4K1 749 aa11.25□□□□□ -0.61
SOX2-OT-215ENST00000493521 GOLGA6L3A6NEY3 463 aa11.25□□□□□ -0.61
SOX2-OT-215ENST00000493521 CASTOR2A6NHX0 329 aa11.25□□□□□ -0.61
SOX2-OT-215ENST00000493521 LRRIQ4A6NIV6 560 aa11.25□□□□□ -0.61
SOX2-OT-215ENST00000493521 PP2D1A8MPX8 630 aa11.25□□□□□ -0.61
SOX2-OT-215ENST00000493521 PTGESO14684 152 aa11.25□□□□□ -0.61
SOX2-OT-215ENST00000493521 INPPL1O15357 1258 aa11.25□□□□□ -0.61
SOX2-OT-215ENST00000493521 ERLIN2O94905 339 aa11.25□□□□□ -0.61
SOX2-OT-215ENST00000493521 SOD2P04179 222 aa11.25□□□□□ -0.61
SOX2-OT-215ENST00000493521 ALDH2P05091 517 aa11.25□□□□□ -0.61
SOX2-OT-215ENST00000493521 SKIP12755 728 aa11.25□□□□□ -0.61
SOX2-OT-215ENST00000493521 NPR3P17342 541 aa11.25□□□□□ -0.61
SOX2-OT-215ENST00000493521 PRPHP41219 470 aa11.25□□□□□ -0.61
SOX2-OT-215ENST00000493521 NAB2Q15742 525 aa11.25□□□□□ -0.61
SOX2-OT-215ENST00000493521 CES5AQ6NT32 575 aa11.25□□□□□ -0.61
SOX2-OT-215ENST00000493521 POTEHQ6S545 545 aa11.25□□□□□ -0.61
SOX2-OT-215ENST00000493521 DTHD1Q6ZMT9 781 aa11.25□□□□□ -0.61
SOX2-OT-215ENST00000493521 RBM43Q6ZSC3 357 aaKnown RBP11.25□□□□□ -0.61
SOX2-OT-215ENST00000493521 FAM43BQ6ZT52 329 aaPredicted RBP11.25□□□□□ -0.61
SOX2-OT-215ENST00000493521 OTUD6AQ7L8S5 288 aa11.25□□□□□ -0.61
SOX2-OT-215ENST00000493521 PALB2Q86YC2 1186 aa11.25□□□□□ -0.61
SOX2-OT-215ENST00000493521 SLFN12Q8IYM2 578 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms