RNA–Protein interactions for RNA: ENST00000492980.1

CCDC88B-208, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 5

Gene CCDC88B, Length 2,118 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-208ENST00000492980 CRELD2Q6UXH1 353 aaPredicted RBP22.74■■□□□ 1.23
CCDC88B-208ENST00000492980 ZBTB9Q96C00 473 aa22.74■■□□□ 1.23
CCDC88B-208ENST00000492980 ZBTB45Q96K62 511 aaPredicted RBP22.74■■□□□ 1.23
CCDC88B-208ENST00000492980 MPHOSPH6Q99547 160 aaKnown RBP22.74■■□□□ 1.23
CCDC88B-208ENST00000492980 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.74■■□□□ 1.238e-8■□□□□ 8.6
CCDC88B-208ENST00000492980 GDF3Q9NR23 364 aa22.74■■□□□ 1.23
CCDC88B-208ENST00000492980 NOC2LQ9Y3T9 749 aaKnown RBP22.74■■□□□ 1.23
CCDC88B-208ENST00000492980 A0A0U1RQG5 324 aaPredicted RBP22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 ZC3H11AO75152 810 aaKnown RBP eCLIP22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 MAFO75444 373 aaPredicted RBP22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 GZMAP12544 262 aa22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 CYP11B1P15538 503 aa22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 FAM193AP78312 1265 aa22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 CAPSQ13938 189 aa22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 SLFN12LQ6IEE8 588 aa22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 UBE2Q2Q8WVN8 375 aa22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 DHX38Q92620 1227 aaKnown RBP22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 PI4K2AQ9BTU6 479 aa22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 TARS2Q9BW92 718 aaKnown RBP22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 TMEM134Q9H6X4 195 aa22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 DDX3YO15523 660 aaKnown RBP22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 HEXIM1O94992 359 aaKnown RBP22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 MMEP08473 750 aa22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 OSBPP22059 807 aa22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 AARSP49588 968 aaKnown RBP eCLIP22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 ACOT2P49753 483 aa22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 GPC5P78333 572 aa22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 GCNT1Q02742 428 aa22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 LMBRD2Q68DH5 695 aaPredicted RBP22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 DPY19L2Q6NUT2 758 aa22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 FASTKD5Q7L8L6 764 aaKnown RBP22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 CALR3Q96L12 384 aaKnown RBP22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 MMP19Q99542 508 aa22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 GPR20Q99678 358 aa22.73■■□□□ 1.23
CCDC88B-208ENST00000492980 DRP2Q13474 957 aa22.72■■□□□ 1.23
CCDC88B-208ENST00000492980 KCTD2Q14681 263 aa22.72■■□□□ 1.23
CCDC88B-208ENST00000492980 IFT20Q8IY31 132 aa22.72■■□□□ 1.23
CCDC88B-208ENST00000492980 FAM167AQ96KS9 214 aa22.72■■□□□ 1.23
CCDC88B-208ENST00000492980 AZI2Q9H6S1 392 aa22.72■■□□□ 1.23
CCDC88B-208ENST00000492980 ADCY3O60266 1144 aa22.72■■□□□ 1.23
CCDC88B-208ENST00000492980 PDE6CP51160 858 aa22.72■■□□□ 1.23
CCDC88B-208ENST00000492980 EPHB4P54760 987 aa22.72■■□□□ 1.23
CCDC88B-208ENST00000492980 CDR2Q01850 454 aa22.72■■□□□ 1.23
CCDC88B-208ENST00000492980 ZACNQ401N2 412 aa22.72■■□□□ 1.23
CCDC88B-208ENST00000492980 CELF3Q5SZQ8 465 aaKnown RBP22.72■■□□□ 1.23
CCDC88B-208ENST00000492980 KCNV1Q6PIU1 500 aa22.72■■□□□ 1.23
CCDC88B-208ENST00000492980 SND1Q7KZF4 910 aaKnown RBP eCLIP22.72■■□□□ 1.23
CCDC88B-208ENST00000492980 ENOSF1Q7L5Y1 443 aa22.72■■□□□ 1.23
CCDC88B-208ENST00000492980 KLHL7Q8IXQ5 586 aa22.72■■□□□ 1.23
CCDC88B-208ENST00000492980 CCDC102AQ96A19 550 aa22.72■■□□□ 1.23
CCDC88B-208ENST00000492980 FNBP1Q96RU3 617 aa22.72■■□□□ 1.23
CCDC88B-208ENST00000492980 CTTNBP2NLQ9P2B4 639 aa22.72■■□□□ 1.23
CCDC88B-208ENST00000492980 PPME1Q9Y570 386 aa22.72■■□□□ 1.23
CCDC88B-208ENST00000492980 PTPRJQ12913 1337 aa22.71■■□□□ 1.23
CCDC88B-208ENST00000492980 A0A0B4J269 797 aa22.71■■□□□ 1.23
CCDC88B-208ENST00000492980 RAD51CO43502 376 aa22.71■■□□□ 1.23
CCDC88B-208ENST00000492980 LGR5O75473 907 aa22.71■■□□□ 1.23
CCDC88B-208ENST00000492980 C4BPAP04003 597 aaKnown RBP22.71■■□□□ 1.23
CCDC88B-208ENST00000492980 HSDL1Q3SXM5 330 aa22.71■■□□□ 1.23
CCDC88B-208ENST00000492980 C11orf63Q6NUN7 778 aa22.71■■□□□ 1.23
CCDC88B-208ENST00000492980 DDX1Q92499 740 aaKnown RBP22.71■■□□□ 1.23
CCDC88B-208ENST00000492980 MSTO1Q9BUK6 570 aa22.71■■□□□ 1.23
CCDC88B-208ENST00000492980 ANKFY1Q9P2R3 1169 aa22.71■■□□□ 1.23
CCDC88B-208ENST00000492980 ADGRA2Q96PE1 1338 aa22.71■■□□□ 1.23
CCDC88B-208ENST00000492980 MCM3APO60318 1980 aa22.71■■□□□ 1.23
CCDC88B-208ENST00000492980 ZSCAN5CA6NGD5 496 aaPredicted RBP22.7■■□□□ 1.23
CCDC88B-208ENST00000492980 TNNI1P19237 187 aa22.7■■□□□ 1.23
CCDC88B-208ENST00000492980 GJA5P36382 358 aa22.7■■□□□ 1.23
CCDC88B-208ENST00000492980 GUCY2DQ02846 1103 aa22.7■■□□□ 1.23
CCDC88B-208ENST00000492980 ZBTB41Q5SVQ8 909 aa22.7■■□□□ 1.23
CCDC88B-208ENST00000492980 TDRD10Q5VZ19 366 aaKnown RBP22.7■■□□□ 1.23
CCDC88B-208ENST00000492980 EMBQ6PCB8 327 aa22.7■■□□□ 1.23
CCDC88B-208ENST00000492980 ARMC9Q7Z3E5 817 aa22.7■■□□□ 1.23
CCDC88B-208ENST00000492980 FAM71BQ8TC56 605 aa22.7■■□□□ 1.23
CCDC88B-208ENST00000492980 BBXQ8WY36 941 aaPredicted RBP22.7■■□□□ 1.23
CCDC88B-208ENST00000492980 EPB41L5Q9HCM4 733 aa22.7■■□□□ 1.23
CCDC88B-208ENST00000492980 MED4Q9NPJ6 270 aa22.7■■□□□ 1.23
CCDC88B-208ENST00000492980 C1orf112Q9NSG2 853 aa22.7■■□□□ 1.23
CCDC88B-208ENST00000492980 RBAKQ9NYW8 714 aaPredicted RBP22.7■■□□□ 1.23
CCDC88B-208ENST00000492980 LDHAP00338 332 aaKnown RBP22.7■■□□□ 1.22
CCDC88B-208ENST00000492980 HLA-DRAP01903 254 aa22.7■■□□□ 1.22
CCDC88B-208ENST00000492980 MARK3P27448 753 aa22.7■■□□□ 1.22
CCDC88B-208ENST00000492980 DCAF12L1Q5VU92 463 aa22.7■■□□□ 1.22
CCDC88B-208ENST00000492980 TRIM50Q86XT4 487 aa22.7■■□□□ 1.22
CCDC88B-208ENST00000492980 FBXO16Q8IX29 292 aaPredicted RBP22.7■■□□□ 1.22
CCDC88B-208ENST00000492980 PRPF31Q8WWY3 499 aaKnown RBP22.7■■□□□ 1.22
CCDC88B-208ENST00000492980 GLG1Q92896 1179 aa22.7■■□□□ 1.22
CCDC88B-208ENST00000492980 FAM81BQ96LP2 452 aa22.7■■□□□ 1.22
CCDC88B-208ENST00000492980 AP1M1Q9BXS5 423 aa22.7■■□□□ 1.22
CCDC88B-208ENST00000492980 PLEKHA4Q9H4M7 779 aa22.7■■□□□ 1.22
CCDC88B-208ENST00000492980 MROH8Q9H579 483 aa22.7■■□□□ 1.22
CCDC88B-208ENST00000492980 TTC7AQ9ULT0 858 aaPredicted RBP22.7■■□□□ 1.22
CCDC88B-208ENST00000492980 MTA2O94776 668 aa22.69■■□□□ 1.22
CCDC88B-208ENST00000492980 HSP90B2PQ58FF3 399 aa22.69■■□□□ 1.22
CCDC88B-208ENST00000492980 CAVIN3Q969G5 261 aa22.69■■□□□ 1.22
CCDC88B-208ENST00000492980 DIS3Q9Y2L1 958 aaKnown RBP22.69■■□□□ 1.22
CCDC88B-208ENST00000492980 CARSP49589 748 aaKnown RBP22.69■■□□□ 1.22
CCDC88B-208ENST00000492980 MORC4Q8TE76 937 aa22.69■■□□□ 1.22
CCDC88B-208ENST00000492980 ALG6Q9Y672 507 aa22.69■■□□□ 1.22
CCDC88B-208ENST00000492980 ESYT3A0FGR9 886 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms