RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 SPATS2LQ9NUQ6 558 aaKnown RBP4.56□□□□□ -1.68
BRCA1-220ENST00000492859 FKBP14Q9NWM8 211 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 ADPRHL2Q9NX46 363 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 COQ3Q9NZJ6 369 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 AKAP7Q9P0M2 348 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-220ENST00000492859 ACTR3BQ9P1U1 418 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 ORC3Q9UBD5 711 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-220ENST00000492859 ADD3Q9UEY8 706 aaKnown RBP4.56□□□□□ -1.68
BRCA1-220ENST00000492859 MTRF1LQ9UGC7 380 aaKnown RBP4.56□□□□□ -1.68
BRCA1-220ENST00000492859 FBXO40Q9UH90 709 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 ATPIF1Q9UII2 106 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 SALL4Q9UJQ4 1053 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 SLC13A4Q9UKG4 626 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 BAG5Q9UL15 447 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 PCDHGB4Q9UN71 923 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 LIMCH1Q9UPQ0 1083 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 TIMM22Q9Y584 194 aa4.56□□□□□ -1.68
BRCA1-220ENST00000492859 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.56□□□□□ -1.68
BRCA1-220ENST00000492859 ZNF335Q9H4Z2 1342 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-220ENST00000492859 A0A1W2PPL8 197 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 CTAGE15A4D2H0 777 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 PI4KAP2A4QPH2 592 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 K7ESF4 209 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 M0R2C6 588 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 EXTL3O43909 919 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 OPA1O60313 960 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 MGEA5O60502 916 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 SOAT2O75908 522 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 CHGBP05060 677 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 S100A9P06702 114 aaKnown RBP4.55□□□□□ -1.68
BRCA1-220ENST00000492859 CTAGE8P0CG41 777 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 EPB41P11171 864 aaKnown RBP4.55□□□□□ -1.68
BRCA1-220ENST00000492859 RARGP13631 454 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 HNRNPLP14866 589 aaKnown RBP eCLIP4.55□□□□□ -1.68
BRCA1-220ENST00000492859 PAMP19021 973 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 TNFSF4P23510 183 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 RPL9P32969 192 aaKnown RBP4.55□□□□□ -1.68
BRCA1-220ENST00000492859 ETV3P41162 512 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 PIK3CBP42338 1070 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 OR1G1P47890 313 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 MRPS15P82914 257 aaKnown RBP4.55□□□□□ -1.68
BRCA1-220ENST00000492859 RBP5P82980 135 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 DNM1Q05193 864 aaKnown RBP4.55□□□□□ -1.68
BRCA1-220ENST00000492859 COASYQ13057 564 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 SNAPC2Q13487 334 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 DOC2AQ14183 400 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 NFE2L1Q14494 772 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 TLR1Q15399 786 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 ATP2B3Q16720 1220 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 USP39Q53GS9 565 aaKnown RBP4.55□□□□□ -1.68
BRCA1-220ENST00000492859 FBXO48Q5FWF7 155 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 XKR9Q5GH70 373 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 STXBP5Q5T5C0 1151 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 OR7E24Q6IFN5 339 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 JMJD6Q6NYC1 403 aaPredicted RBP4.55□□□□□ -1.68
BRCA1-220ENST00000492859 NXPE4Q6UWF7 544 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 ILDR2Q71H61 639 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 PIWIL3Q7Z3Z3 882 aaKnown RBP4.55□□□□□ -1.68
BRCA1-220ENST00000492859 CTAGE6Q86UF2 777 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 LUZP1Q86V48 1076 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 LRRTM4Q86VH4 590 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 CD302Q8IX05 232 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 CTAGE4Q8IX94 777 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 KIAA0319LQ8IZA0 1049 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 FAM13CQ8NE31 585 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 LINS1Q8NG48 757 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 CCDC110Q8TBZ0 833 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 IFI44Q8TCB0 444 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 SH3RF3Q8TEJ3 882 aaPredicted RBP4.55□□□□□ -1.68
BRCA1-220ENST00000492859 ZNF483Q8TF39 744 aaPredicted RBP4.55□□□□□ -1.68
BRCA1-220ENST00000492859 TRAPPC12Q8WVT3 735 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 HTRA1Q92743 480 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 NXPE3Q969Y0 559 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 SGK3Q96BR1 496 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 ATP6V0BQ99437 205 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 GAS2L1Q99501 681 aaPredicted RBP4.55□□□□□ -1.68
BRCA1-220ENST00000492859 MXD3Q9BW11 206 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 NYXQ9GZU5 481 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.55□□□□□ -1.68
BRCA1-220ENST00000492859 RNF38Q9H0F5 515 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 ZCWPW1Q9H0M4 648 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 C1orf21Q9H246 121 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 BHMT2Q9H2M3 363 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 THAP9Q9H5L6 903 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 JMJD4Q9H9V9 463 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 CERS4Q9HA82 394 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 TAS2R3Q9NYW6 316 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 MOCS1Q9NZB8 636 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 SRP68Q9UHB9 627 aaKnown RBP4.55□□□□□ -1.68
BRCA1-220ENST00000492859 FKBPLQ9UIM3 349 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 RPS6KA6Q9UK32 745 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 DOLKQ9UPQ8 538 aa4.55□□□□□ -1.68
BRCA1-220ENST00000492859 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.55□□□□□ -1.68
BRCA1-220ENST00000492859 OR6C65A6NJZ3 312 aa4.54□□□□□ -1.68
BRCA1-220ENST00000492859 CHURC1-FNTBB4DL54 471 aa4.54□□□□□ -1.68
BRCA1-220ENST00000492859 GOLGA6L19H0YKK7 550 aa4.54□□□□□ -1.68
BRCA1-220ENST00000492859 KRIT1O00522 736 aa4.54□□□□□ -1.68
BRCA1-220ENST00000492859 WNT7AO00755 349 aa4.54□□□□□ -1.68
BRCA1-220ENST00000492859 PCDHGA12O60330 932 aa4.54□□□□□ -1.68
BRCA1-220ENST00000492859 EFCAB14O75071 495 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms